Mus caroli (Ryukyu mouse): 110306801
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Entry
110306801 CDS
T05910
Symbol
Brf1
Name
(RefSeq) transcription factor IIIB 90 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110306801 (Brf1)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
110306801 (Brf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
BRF2-like_C_cyclin_rpt
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
110306801
NCBI-ProteinID:
XP_021034568
Ensembl:
MGP_CAROLIEiJ_G0018166
UniProt:
A0A6P5QLK1
LinkDB
All DBs
Position
12:complement(107409787..107454882)
Genome browser
AA seq
676 aa
AA seq
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MTGRVCRGCGGTDIELDAARGDAVCTGCGSVLEDNIIVSEVQFVENSGGGSSAVGQFVSL
DGAGKTPTLGGGFHVNLGKESRAQTLQNGRRHIHHLGSQLQLNQHCLDTAFNFFKMAVSK
HLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAPA
IDPCLYIPRFAHLLEFGEKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
DFRRTVKEVISVVKVCESTLRKRLTEFEDTPTSQLTIDEFMKIDLEEECDPPSYTAGQRK
LRMKQLEQVLSKKLEEVEGEISSYQDAIEIELENSRPKAKGALANLSKDGSGEDATSSPL
CEEDTEDEELEAAASHMNKDFYRELLGDHGGSEAAGDPDGDSRPLALESLLGPLPTAASL
GISDSIRECISSPSGDPKDSSGDGELDLSGIDDLEIDRYILNESEARVKAELWMRENAEY
LREQKEKEARIAKEKELGIYKEHKPKKSCKRREPILASTAGEAIEKMLEQKKISSKINYS
VLRDLNSKGGGSPPRDDSQPPEHASTKKLSRRKRASTRNSADPGTSTGKRLRPLVSAQPA
KKAAVGEALLLSSPALGAEPIKPSAVLVESGPVSYHPEEDADEEDAEDEDGEPCVSALQM
MGGNDYGCDGDEDDGY
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgacgggccgcgtctgccgcggctgcggcggcacggacatcgagttggatgcggcgcgc
ggcgatgcggtgtgcacgggctgcggctcggtgctcgaggacaacatcatcgtgtccgag
gtgcagttcgtggagaacagcggcggcggctcgtcggcggtcggccagttcgtgtcgctg
gacggtgctgggaaaaccccaaccctaggtggtggctttcacgtgaacttgggaaaggaa
tcaagagcacagaccctgcagaatgggcggcgccacatccaccacctggggagccagctg
cagctgaaccagcactgcctggacacagcattcaatttcttcaagatggctgtaagcaag
catcttacccgaggacggaaaatggcccatgtgattgctgcctgcctctacttggtttgc
cgaactgaaggcacacctcacatgctccttgacctcagcgacctgctccaggttaatgtg
tacgtgttggggaagacgttcctgctcttggcgagggagctttgcatcaacgcaccagct
atagacccatgcttgtacattccacgctttgctcacctgctggagtttggggagaagaac
catgaagtatccatgacagccctgaggcttctgcagagaatgaaaagggattggatgcac
acaggccggcgcccctccggcctctgtggagcagcacttttggttgcagccagaatgcat
gacttccggagaacggtcaaagaagtcatcagtgtggtcaaagtatgtgagtccacacta
cggaagaggctcacagaatttgaagacactccaaccagtcagctcactattgatgagttt
atgaagattgacttggaggaagagtgcgaccctccctcgtacacagctggccagaggaag
ctgcgcatgaagcagctggaacaggtcctgtcaaaaaagctagaagaagttgaaggtgaa
atatccagttaccaggatgccattgaaattgagctagaaaacagccgaccaaaagcaaaa
ggggctctggccaacttgtcaaaggatggctccggtgaggacgccacatccagtcccctc
tgtgaggaagacaccgaggatgaggagctggaggctgccgccagccacatgaacaaggac
ttttaccgagagctcctcggggaccatggcggctcggaggcagcaggagaccctgatggg
gacagcagacccctcgccctggagtccctacttggtcccctgcccacagcagccagcctg
ggcatctccgactccatccgagagtgcatctcctccccaagtggggaccccaaagactct
tcaggggacggggagctggacctcagtggcattgatgaccttgagatcgacagatacatc
ctgaatgagtcagaagcccgagttaaagctgagttgtggatgcgggagaatgctgagtac
ctgcgggagcagaaggagaaagaagcaagaatagcgaaggagaaggagcttggcatctat
aaggagcacaagcccaagaagtcttgcaaacgccgggagccaatcctggccagcacagct
ggggaagctattgagaagatgctggaacagaagaaaatctccagcaagatcaactacagt
gtgctgcgggaccttaacagcaagggtggaggcagcccacccagggacgactcacagccc
ccagagcatgccagcaccaagaagctgtcacggaggaaaagagcaagtaccagaaatagt
gctgatcctggaacaagcacagggaagaggttgaggcctctggtgtctgcccagccggct
aaaaaggcagctgtgggagaggccttactcttaagttctcctgccttgggagcagagcca
atcaagccatcagcagtcttggtagagagtggccctgtgtcgtaccatcctgaggaggat
gcagatgaggaggatgccgaggacgaggatggagagccctgcgtcagtgctctgcagatg
atgggtggcaatgattacggctgtgatggtgatgaggatgatggctactga
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