Mus caroli (Ryukyu mouse): 110306938
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Entry
110306938 CDS
T05910
Symbol
Lamb1
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04151
PI3K-Akt signaling pathway
mcal04510
Focal adhesion
mcal04512
ECM-receptor interaction
mcal05145
Toxoplasmosis
mcal05146
Amoebiasis
mcal05165
Human papillomavirus infection
mcal05200
Pathways in cancer
mcal05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
110306938 (Lamb1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110306938 (Lamb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110306938 (Lamb1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110306938 (Lamb1)
09162 Cancer: specific types
05222 Small cell lung cancer
110306938 (Lamb1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
110306938 (Lamb1)
09174 Infectious disease: parasitic
05146 Amoebiasis
110306938 (Lamb1)
05145 Toxoplasmosis
110306938 (Lamb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
CorA
ATG17_like
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-GeneID:
110306938
NCBI-ProteinID:
XP_021034769
Ensembl:
MGP_CAROLIEiJ_G0017674
UniProt:
A0A6P5QTQ7
LinkDB
All DBs
Position
12:27675136..27742110
Genome browser
AA seq
1834 aa
AA seq
DB search
MEGPLSSLPTFAFSPRYLSRKEDPKKRQAACLLRPPSRVASPRLRGLHMGLLQVFAFGVL
ALWGTRVCAQEPEFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLHKPEPYCIVSHLQE
DKKCFICDSQDPYHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVENVTIQLDLEAEFH
FTHLIMTFKTFRPAAMLIERSSDFGKTWGVYRYFAYDCESSFPGISTGPMKKVDDIICDS
RYSDIEPSTEGEVIFRALDPAFKIEDPYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRM
EIREKYYYAVYDMVVRGNCFCYGHASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCELC
MDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGR
NCEQCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHV
EGERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQ
CLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYYFTTL
DHYIYEAEEANLGPGVVVVERQYIQDRIPSWTGPGFVRVPEGAYLEFFIDNIPYSMEYEI
LIRYEPQLPDHWEKAVITVQRPGKIPASSRCGNTVPDDDNQVVSLSPGSRYVVLPRPVCF
EKGMNYTVRLELPQYTASGSDVESPYTFIDSLVLMPYCKSLDIFTVGGSGDGEVTNSAWE
TFQRYRCLENSRSVVKTPMTDVCRNIIFSISALIHQTGLACECDPQGSLSSVCDPNGGQC
QCRPNVVGRTCNRCAPGTFGFGPNGCKPCDCHLQGSASAFCDAITGQCHCFQGIYARQCD
RCLPGYWGFPSCQPCQCNGHALDCDTVTGECLSCQDYTTGHNCERCLAGYYGDPIIGSGD
HCRPCPCPDGPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDDCASGFFGNPSDFGGS
CQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQLCQYGYYGDALRQDCRKCVCNY
LGTVKEHCNGSDCHCDKATGQCSCLPNVIGQNCDRCAPNTWQLASGTGCGPCDCNAAHSF
GPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGIETPQCDQSTGQCV
CVEGVEGPRCDKCTRGYSGVFPDCTPCHQCFALWDAIIGELTNRTHKFLEKAKALKISGV
IGPYRETVDSVEKKVNEIKDILAQSPAAEPLKNIGILFEEAEKLTKDVTEKMAQVEVKLS
DTASQSNSTAGELDALQAEAESLDKTVKELAEQLEFIKNSDIQGALDSITKYFQISLEAE
KRVNASTTDPNSTVEQSALTRDRVEDLMLERESQFKEKQEEQARLLDELAGKLQSLDLSA
AAEMTCGTPPGADCSESECGGPNCRTDEGEKKCGGPGCGGLVTVAHSAWQKAMDFDRDVL
SALAEVEQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLRNLIKQIRNFLT
EDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVETLSQVEVILQQSAADIARAE
LLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEAAIKQADEDIQGTQNLLTSIES
ETAASEETLTNASQRISNLERNVEELKRKAAQNSGEAEYIEKVVYSVKQNADDVKKTLDG
ELDEKYKKVESLIAQKTEESADARRKAELLQNEAKTLLAQANSKLQLLEDLERKYEDNQK
YLEDKAQELVRLEGEVRSLLKDISEKVAVYSTCL
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggaagggcccctctcctctctcccaacatttgccttttctccccgctacctctccaga
aaggaagacccgaagaaaagacaggcagcttgcctgctgcgtcctccttcccgtgtcgcg
tcccctcggctgcgaggactgcacatggggctgctccaggtgttcgcctttggtgtccta
gccctatggggcacccgagtgtgcgctcaggaaccggagttcagctatggctgcgcggaa
ggcagctgctaccctgccactggcgaccttcttatcggccgagcgcaaaagctctcagtg
acctcgacatgtggactgcacaagccagagccctactgtattgtcagccacctgcaggag
gacaagaaatgcttcatatgtgactcccaagatccttatcatgagaccctcaatcccgac
agccatctcattgagaatgtggtcacaacatttgctccaaaccgccttaagatttggtgg
caatctgaaaatggtgtggagaacgtgactatccaactggacctggaagcagagttccac
ttcactcatctcatcatgactttcaagacattccgcccagctgccatgctgatcgagcgg
tcttctgactttgggaagacttggggcgtgtacagatacttcgcctacgactgtgagagc
tcgttcccaggcatttcaactggacccatgaagaaagtggatgacatcatctgtgactct
cgatattctgacattgagccctcgacagaaggagaggtaatatttcgtgctttagatcct
gctttcaaaattgaagacccttatagtccaaggatacagaatctattaaaaatcaccaac
ttgagaatcaagtttgtgaaactgcacaccttgggagataaccttttggactccagaatg
gaaatcagagagaagtactattacgctgtttatgatatggtggttcgagggaactgcttc
tgctatggccacgccagcgaatgcgcccctgtggatggagtcaatgaagaagtggaagga
atggttcacgggcactgcatgtgcagacacaacaccaaaggcctgaactgtgagctgtgc
atggatttctaccacgatttgccatggagacctgctgaaggccggaacagcaacgcctgc
aaaaaatgtaactgcaacgaacattccagctcgtgtcactttgacatggcagtcttcctg
gctactggcaacgtcagcgggggtgtgtgtgataactgtcagcacaacaccatggggcgc
aactgtgagcagtgcaaaccgttctacttccagcaccctgagagggacatccgggacccc
aatctctgtgaaccatgtacctgtgacccagctggttctgagaatggcgggatctgtgac
gggtacactgatttttctgtgggtctcattgctggtcagtgtcggtgcaaattgcatgtg
gagggagagcgctgtgatgtgtgtaaagaaggcttctacgacttaagtgctgaagacccg
tatggttgtaaatcatgtgcttgcaatcctctgggaacaattcctggtgggaatccttgt
gattctgagactggctactgctactgtaagcgcctggtgacaggacagcgctgtgaccag
tgcctgccgcagcactggggcttaagcaatgatttggatgggtgtcgaccttgtgactgt
gaccttggaggggcgttgaacaatagctgctccgaggactccggccagtgctcctgcctg
ccccacatgattgggcggcagtgtaacgaggtggagtccggttactacttcaccaccctg
gaccactacatctacgaagccgaggaagccaatctggggcctggagtcgttgtggtggaa
aggcagtacattcaggaccgcattccttcctggacaggacctggcttcgtccgggtgcct
gaaggggcttatttggagtttttcattgacaacataccgtattccatggagtatgaaatc
ctgattcgctatgagccacagctgccagaccactgggagaaagctgtcatcactgtacag
cggccggggaagattccagccagcagccgatgtggtaacacggttcccgatgatgacaac
caggtggtgtccttgtcaccgggttcaagatatgttgtcctccctcgccccgtgtgcttt
gagaagggaatgaactacacggtgaggttggagctgccccagtatacggcatcgggcagt
gacgtggagagcccttacacattcatcgactcgcttgttctcatgccctactgtaaatcg
ctggacatcttcactgttggcggctcaggcgacggggaggtcaccaatagtgcctgggaa
accttccaacgctacaggtgtctggagaacagccggagtgtggtaaaaacacctatgacg
gatgtctgcagaaacattatcttcagcatctctgccttgattcaccagacgggccttgct
tgtgaatgtgaccctcagggatctctgagttccgtgtgtgaccccaacggtggccagtgc
cagtgccgtcctaatgtggttggaagaacctgcaacaggtgtgccccgggcacctttggc
tttggccccaacggatgcaaaccttgtgactgccatctgcaagggtctgccagtgccttc
tgtgacgcgatcactggccagtgccactgtttccagggcatctatgctcggcaatgtgac
cgatgtctccctgggtattggggctttcccagctgccagccctgccagtgtaatggccat
gctctagactgtgacacagtgacaggggagtgtctgagctgtcaggactacaccacaggc
cacaactgcgaaaggtgcctggctggctactacggtgatcccatcattgggtcaggagac
cactgtcgcccttgcccttgtcctgatggtcctgacagtggacgccagtttgccaggagc
tgttatcaagaccccgtcactctccagcttgcgtgtgtttgtgatcctgggtacattggc
tccagatgtgatgactgtgcctctggattttttggcaatccctcagactttgggggttca
tgtcaaccatgtcagtgccaccacaacattgacactaccgatccagaagcctgtgacaag
gagacgggacgatgcctcaagtgcctgtaccacacggaaggggaccattgccagctctgc
cagtatgggtactacggcgatgctcttcggcaagactgtagaaagtgtgtctgcaattac
ctgggcacggtgaaggaacattgtaatggctctgactgccactgtgacaaagccactggt
cagtgctcgtgccttcccaatgtgatcgggcagaactgtgaccggtgtgcgcccaacacc
tggcagctggctagcgggactggctgcgggccctgcgattgcaatgctgcgcattccttt
gggccatcctgcaacgagttcacaggacagtgccagtgcatgccgggctttggaggccga
acctgcagcgagtgccaggagctcttctggggagaccctgatgtggaatgccgagcctgt
gattgtgatcccaggggcattgagacacctcagtgtgaccagtccacgggccagtgtgtc
tgtgtggagggtgtagagggtcctcgctgcgacaagtgcaccagaggttactcgggggtc
tttcctgactgcacaccctgccaccagtgctttgctctctgggatgccatcattggtgaa
ctgaccaacaggacccacaaattcctggagaaagccaaggctctgaaaatcagtggtgtg
attggtccctaccgagagaccgtggactctgtagagaagaaagtcaatgagataaaagac
atcctggcccagagcccagcagcggaaccactgaaaaacattggcattctctttgaggag
gcagagaaattaaccaaagatgtcacagaaaagatggctcaggtagaagtgaaattatct
gatacagcttcacagagtaacagcacagctggagagctcgacgcattgcaggcagaagca
gagagccttgacaagaccgtgaaagagctggcagaacagctggaatttataaaaaactcc
gatattcagggtgccttggatagcatcaccaagtatttccagatctctcttgaggcagag
aagcgggtgaatgcctccaccacagaccccaacagcactgtggagcagtctgccctcacg
agagacagagtagaagatctgatgttggagcgagagtctcagttcaaggagaagcaggag
gaacaggcacgccttctggatgaactggccggcaaactgcaaagtctcgacctgtcggct
gctgcagagatgacctgtgggacgcctccaggggctgactgttccgaaagtgaatgtggc
ggccccaactgcagaactgacgaaggagagaagaagtgtggggggcctggctgtggtggc
ctggtcactgtggcccacagtgcttggcagaaagccatggattttgaccgtgatgtcctg
agtgccctggccgaagtcgaacagctctccaagatggtctctgaagcaaaagtgagagca
gatgaggcgaagcagaatgcacaggatgtcctgttaaaaacaaatgctaccaaagaaaaa
gtggacaagagcaacgaggacctgcggaacctcatcaagcagatcagaaacttcctgact
gaggacagtgctgatctagacagcattgaagcagttgccaatgaagtactgaagatggag
atgcctagcacgccacagcagctacagaacctaacggaagacatccgggagcgagttgaa
accctttctcaagtcgaggttattctgcagcagagtgcagctgacattgccagagctgag
ctgttgcttgaggaagctaagagagcaagcaaaagtgcaacagatgttaaagtcactgca
gacatggtgaaggaagcattagaagaagcagaaaaggcccaggttgcagcagaggcggcg
attaaacaagctgatgaggatatccaaggaacccaaaacctgctaacatcgattgaatct
gaaacggcagcttctgaggaaaccctgaccaacgcctcccagcgcatcagcaatcttgag
aggaacgtggaggagcttaagcgtaaagctgcccagaactctggggaggcagaatatatt
gaaaaagtggtatattctgtaaaacagaacgcagacgatgttaagaagactctagatggc
gaacttgatgaaaagtataagaaggtagaaagtttaattgcccaaaaaactgaagagtca
gcagatgccaggaggaaagctgagctgctacagaatgaagcaaaaacactcttggctcaa
gccaacagcaagctccagctgttggaagacttagaaagaaaatatgaggacaatcaaaaa
tacttggaagataaagctcaagaattagtgcgactggaaggagaggtccgctccctgctt
aaggacataagtgagaaagttgcggtttacagcacctgcttataa
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integrated database retrieval system
