Mus caroli (Ryukyu mouse): 110307047
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Entry
110307047 CDS
T05910
Symbol
Esr2
Name
(RefSeq) estrogen receptor beta isoform X1
KO
K08551
estrogen receptor beta
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal01522
Endocrine resistance
mcal04081
Hormone signaling
mcal04915
Estrogen signaling pathway
mcal04917
Prolactin signaling pathway
mcal04929
GnRH secretion
mcal05200
Pathways in cancer
mcal05207
Chemical carcinogenesis - receptor activation
mcal05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
110307047 (Esr2)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
110307047 (Esr2)
04915 Estrogen signaling pathway
110307047 (Esr2)
04917 Prolactin signaling pathway
110307047 (Esr2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110307047 (Esr2)
05207 Chemical carcinogenesis - receptor activation
110307047 (Esr2)
09162 Cancer: specific types
05224 Breast cancer
110307047 (Esr2)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
110307047 (Esr2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110307047 (Esr2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mcal03310
]
110307047 (Esr2)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
110307047 (Esr2)
Nuclear receptors [BR:
mcal03310
]
3. Estrogen like
3A. Estrogen receptor
110307047 (Esr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERbeta_N
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
110307047
NCBI-ProteinID:
XP_021034917
Ensembl:
MGP_CAROLIEiJ_G0017859
UniProt:
A0A6P5QMB6
LinkDB
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Position
12:complement(70668350..70721855)
Genome browser
AA seq
567 aa
AA seq
DB search
MSICASSHKDFSQLRPTQDMEIKNSPSSLTSPASYNCSQSILPLEHGPIYIPSSYVESRH
EYSAMTFYSPAVMNYSVPSSTGNLEGGPVRQTASPNVLWPTSGHLSPLATHCQSSLLYAE
PQKSPWCEARSLEHTLPVNRETLKRKLSGSGCASPVTSPNAKRDAHFCAVCSDYASGYHY
GVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRR
ERCGYRIVRRQRSASEQVHCLNKAKRTSGHTPRVKELLLSSLSPEQLVLSLLEAEPPNVL
VSRPSMPFTEASMMMSLTKLADKELVHMIGWAKKIPGFVELSLLDQVRLLESCWMEVLMV
GLMWRSIDHPGKLIFAPDLVLDRSSEDPHWHVAQTKSAVPRDEGKCVEGILEIFDMLLAT
TARFRELKLQHKEYLCVKAMILLNSSMYPLATASQEAESSRKLTHLLNAVTDALVWVISK
SGISSQQQSVRLANLLMLLSHVRHISNKGMEHLLSMKCKNVVPVYDLLLEMLNAHTLRGY
KSSISGSECCSTEDSKSKESSQNLQSQ
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtccatctgtgcctcttctcacaaggatttttctcagctgcggcctacgcaagacatg
gagatcaaaaactcaccatcaagccttacttcccccgcttcttataactgtagccagtcc
atcctgcccttggagcatggccccatctatatcccttcctcctatgtagagagccgtcac
gaatactcagccatgacattctacagtcctgctgtgatgaactacagtgtccccagcagc
accggtaacctggaaggtgggcctgtccgccagaccgcaagcccaaatgtgctatggcca
acttctggacacctctctcctttagccacccactgccaatcatcgcttctctatgcagaa
cctcaaaagagtccttggtgtgaagcaagatcactagaacacaccttacctgtaaacaga
gagacactgaagaggaagcttagcggcagcggttgtgccagccctgttactagtccaaac
gccaagagggatgctcacttctgcgctgtctgcagtgattacgcatctgggtatcattac
ggtgtctggtcctgtgaaggatgtaaggccttttttaaaagaagcattcaaggacataat
gactatatctgcccagccacgaatcagtgtaccatagacaagaaccggcgtaaaagctgc
caggcctgccgacttcgcaagtgttatgaagtaggaatggtcaagtgtggatccaggaga
gaaaggtgtgggtaccgaatagtacgaagacagagaagtgccagtgagcaggtgcattgc
ctgaacaaagccaagagaaccagtgggcacacaccccgggtgaaggagctgctgctgagc
tctctgagtcccgagcagctggtgctcagcctgctggaagctgagccacccaatgtgcta
gtgagccgtcccagcatgcccttcaccgaggcctccatgatgatgtccctcacgaagctg
gctgacaaggaactggtgcacatgattggctgggccaagaaaatccctggctttgtggag
ctcagcctgttggatcaagtccgtctcttggaaagctgctggatggaggtgctgatggtg
gggctgatgtggcgctccatcgaccaccccggcaagctcatctttgctccagacctcgtt
ctggacaggtcctcagaagaccctcactggcacgttgcgcagacgaagagtgctgtccca
agggatgaggggaagtgcgtagaagggattctggaaatctttgacatgctcctggcgacg
acggcacggttccgtgagttaaaactgcagcacaaagaatatctgtgtgtgaaggccatg
attctcctcaactccagtatgtaccccttggctaccgcaagccaggaagcagagagtagc
cggaagctgacacacctattgaacgcagtgacagatgccctggtctgggtgatttcgaag
agtggtatctcttcccagcagcagtcagtccgtctggccaacctcctgatgcttctttct
catgtcaggcacatcagtaacaaaggcatggaacatctgctcagcatgaagtgcaaaaat
gtggtgccagtgtacgacctgctgctggagatgctgaatgctcacacacttcgagggtac
aagtcctcaatctcggggtctgagtgctgctcgacagaggacagtaagagcaaagagagc
tcccagaacctccagtcacagtga
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