Mus caroli (Ryukyu mouse): 110307128
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Entry
110307128 CDS
T05910
Symbol
Syne3
Name
(RefSeq) nesprin-3 isoform X1
KO
K21761
nesprin-3
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110307128 (Syne3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcal03036
]
110307128 (Syne3)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
110307128 (Syne3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KASH
Spectrin
DUF3288
Spectrin_SYNE1
Motif
Other DBs
NCBI-GeneID:
110307128
NCBI-ProteinID:
XP_021035038
Ensembl:
MGP_CAROLIEiJ_G0018081
UniProt:
A0A6P5QZZ8
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All DBs
Position
12:complement(99414313..99494840)
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AA seq
976 aa
AA seq
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MTQQPQEDFERSVEDAQAWMKVIQEQLQVNDNTKGPRAALEARLRETEKICQLESEGFVK
VELVLRAAEALLATCQEGQKPEILARLRDIKSQWEETVTYMTHCHSRIEWVWLHWSEYLL
AQDEFYRWFQKMVVALEPPVELQLGLKEKQWQLSHAQVLLHNVDNQAVLLDRLLEEAGSL
FSRIGDPSVDEDAQKRMKAEYDAVKARAQHRVDLLAQVAQDHEQYREDVNEFQLWLKAVV
EKVHSCLGRNCKMATELRLSTLQDIAKDFPRGEESLKRLEEQAVGVIRNTSPLGAEKISG
ELEEMRGVLEKLRVLWKEEEGRLWGLLQSRGDCEQQIQQLEAELEELKKSLQRLAQEGLE
TTVKTATEDELLAQWRLFSGTRAALASEEPRVDRLQTQLKKLVTFPDLQSLSDSVVATIR
EYQSMKGKNTRLHNATRAELWQRFQRPLNDLQLWKALAQRLLDITASLPDLASIHTFLPQ
IEAALTESSRLKEQLAMLQLKTDLLGSIFGQERAATLLEQVTSSVRDRDLLHNSLLQRKS
KLQSLLVQHKDFGVAFDPLNRKLLDLQARIQAEKGLPRDLPGKQVQLLRLQGLQEEGLDL
GTQIEVVRPLAHGNSKHQQKVDQISCDQQALQRSLEDFVDRCQQNVREHCTFSHRLSELQ
VWITMATQTLESHQGDVRLWDAESQEAGLETLLSEIPEKEVQVSLLQALGQLVMKKSSPE
GAAMVQEELRKLMESWQALRLLEENMLSLMRNQQLQRTEVDTGKKQVFTNNIPKAGFLIN
PQDPIPRRRHRANPLEGHDLPEDHPQLLRDFEQWLQAENSKLHRIITMRAATAKDLRTRE
VKLQELEARIPEGQHLFENLLRLGPARDPSNELEDLRYQWMLYKSKLKDSGHLLTESSPG
ELTAFQKSRRQKRWRSPCSLLQKACRVALPLQLLLLLFLLLLFLLPAGEEERSCALANNF
ARSFALMLRYNGPPPT
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagcagccccaggaggactttgagaggagcgtggaggatgcccaggcctggatg
aaggtgatacaggagcagcttcaggtcaatgacaacacgaaggggccccgagcggccctg
gaggcgaggcttcgagagacagagaaaatctgccagctggagtctgaaggattcgtgaag
gtggaactggtcctgcgggcggcggaggccctcttggcaacttgccaggagggccagaaa
cctgagatcctggcccggctgagggatatcaagtctcagtgggaggagacggtcacctac
atgacccactgccacagtcgcatcgagtgggtgtggctgcactggagcgagtacctgctg
gcccaggatgagttttaccgctggttccagaagatggtggtcgcactggagccccccgtg
gagctgcagctgggcctgaaggagaagcaatggcagctgagccacgcccaggtgctgctg
cacaacgtggacaatcaggctgtgctcctggacaggctgctggaggaggcgggctccctg
ttcagcaggatcggagaccccagcgtggatgaagatgcccagaagaggatgaaggctgag
tacgatgctgtgaaggccagagcccagcacagggtggacctcctggcccaggtggcccag
gaccatgaacagtaccgggaggacgtgaatgagttccagctgtggctgaaggcggtggtg
gagaaggtgcacagctgtctggggcggaactgcaagatggccacagaacttcgcctttct
acgctgcaggacatcgccaaggatttccctaggggtgaggagtccctgaaaagattggag
gaacaggctgtgggtgtcattcgaaacacctctcccttgggtgcagagaagatctcaggg
gagctggaggagatgcggggtgtcctcgagaagctgagagtcctctggaaagaggaggaa
gggaggctgtggggcctgctccagtccaggggggactgtgagcagcagatccaacagctg
gaggcagaactggaagagttgaagaaaagccttcagaggctggcccaggagggcttggag
accacggtgaagacagccacagaggatgagctgctggcccagtggaggctgttctcgggg
actcgggctgcactggcttcagaggaaccccgtgtagaccggttacaaactcaactgaag
aaacttgtcaccttcccggacctgcagtcactctctgacagcgtggtagccaccattcgg
gaataccaaagtatgaaggggaagaataccaggctccacaatgcgacccgggcagagctg
tggcagcgtttccagcggcccctaaatgacctgcagctgtggaaggccctggcccagagg
ctcctggacatcacggccagcctgcccgacctggcctccattcacacctttctaccccag
attgaggcagccctcacggaaagctcccgcctgaaagagcagctggcgatgctgcagttg
aagaccgacctgctgggcagcatctttggccaggagagagcagccaccctcctggagcag
gtgacaagttctgtgagggacagagacctactgcataacagccttcttcagcggaagagc
aaacttcagagcctgcttgttcagcacaaggactttggggtggcttttgatcccctaaac
aggaagctcctagacctccaggccaggatccaagcagagaaagggcttcctcgggacctt
cctggaaaacaggtccagctgctaaggttgcaggggctgcaggaggaggggctggacctg
gggacacagatcgaggttgtgaggcctcttgcccacgggaactctaagcaccagcagaaa
gtagaccagatctcctgtgaccagcaagccctgcagaggtccctggaggatttcgtggac
aggtgtcagcagaacgtacgggaacattgtaccttcagtcacaggctgtcggagctgcag
gtatggatcaccatggccacacagacgttggagtcacaccaaggggatgtgcgtctgtgg
gatgctgagtcccaagaggctggactcgagacgctgctgtctgaaatcccagagaaagag
gtccaggtgtccctgctccaagcactgggccagcttgtgatgaagaagtcttccccagag
ggggcagccatggtccaggaggagctgaggaagctgatggagtcttggcaggccctgcgg
ctgctagaggagaacatgctgagtctcatgagaaaccagcagctgcagaggacagaggtg
gacacgggaaagaagcaggttttcaccaacaacatcccgaaggccggctttctcatcaac
cctcaggaccccattcccaggagacggcacagggcaaacccactggaaggacacgacctc
cctgaagatcatccccagctcctgagggactttgaacagtggctgcaggcagaaaactcc
aagctacatagaatcatcacaatgagagcggccacagccaaggacttgaggaccagagag
gtgaagctgcaggagctggaagcccgaatcccagaaggccagcacctctttgagaacctg
cttcgtcttgggccggcaagggacccctccaacgagctggaagatctgcgctaccagtgg
atgctgtataagtccaagctcaaggactctggccacctgctgactgagagttctccgggg
gagctgactgcattccagaagagtcggaggcagaagcggtggcggagtccctgctctctc
ctacagaaagcgtgccgcgtggcgctgccattgcagctgttgctcctgctctttctgctg
ctgctgttcctgctgccagccggcgaggaggagcgcagctgcgccctggccaacaacttc
gcccgctcctttgcgctcatgcttcggtacaatggccccccgcccacctag
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