Mus caroli (Ryukyu mouse): 110307153
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Entry
110307153 CDS
T05910
Symbol
Six4
Name
(RefSeq) homeobox protein SIX4 isoform X1
KO
K15615
homeobox protein SIX4
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
110307153 (Six4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110307153 (Six4)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
110307153 (Six4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
110307153
NCBI-ProteinID:
XP_021035080
Ensembl:
MGP_CAROLIEiJ_G0017841
UniProt:
A0A6P5QX05
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Position
12:complement(67707021..67720713)
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AA seq
775 aa
AA seq
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MSSSSPTGQIASAADIKQENGMESASEGQEAHREVAGGAAAGLSPPAPAPFPLEPGDAAA
ASRVSREEGAAAAGAADQVQLHSELLGRHQHAAAAQPPLAFSPDHVACVCEALQQGGNLD
RLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPELYSILESHSFESANHPLLQQLWY
KARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRY
PSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTEDESSKGHEDL
SPHPLSGTSDGVTNLSLSSHVEPVYMQQIGNAKISLSSSGVLLNGSLVPASTSPVFLNGN
SFIQGHNGVILNGLNVGNTQTVSLNPPKMSSNIVGNGIAMTDILGSTSQDVKEFKVLQSS
AVNSAATTSYSPSAPVSFPGLIPCTEVKREGIQTVASQDGGSVVTFTTPVQINQYGIVQI
PNSGANGQFLNGSIGFSPLQLPPVSVAASQGNLSVTPSTSDGSTFTSEPATVQHGKLFLS
PLTPSAVVYTVPNSGQTVGAVKQEGLERGLVFSQLMPVNHSAQVNASLSSENLSGSGLHP
LTSSLVNVSAAHGFSLTPPTLLNPAELNPDLAESQPVSAPVASKCTVSSVSNSNYATLQN
CSLIPGQDLLSGPMTQAALGEIVPTAEEQVSHASTAVHQDFVREQRLVLQSVPNIKENFI
QNSENKATNNLMMLDSKSKYVLDGMVEAGCEDLGTDKKELAKLQTVQLDEDMQDL
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcctcccccaccgggcagattgcaagtgcggcggacatcaagcaggagaat
gggatggaaagcgcctcggaaggacaggaggcgcaccgagaagtggcggggggcgcggcg
gctgggctgagccccccggctccagctcctttccccctggagccgggggacgccgcggct
gcctccagggtaagccgggaggaaggggcagcggcggcgggagcggcagatcaggtacaa
ctccactcggaacttctgggcaggcaccagcacgcagccgccgcgcagcccccgctggcc
ttctcgccggaccatgtcgcctgcgtgtgcgaggctttgcagcaggggggcaacctggac
cgcctggcccggtttctttggtccctgccccagagcgatctgctacgtggcaacgagagc
cttctgaaggcgcgagcgctcgtggccttccaccagggcatctaccctgagttgtacagc
atcctcgagagccacagcttcgagtcggccaaccatccgctgctgcagcagctctggtac
aaggcgcgctacaccgaggccgagcgagcgcgcggccggccgctgggcgccgtggacaag
taccggctgcgcaggaaattccccttgccccgcaccatctgggacggcgaggagacggtg
tattgtttcaaggagaagtcgcgcaacgcgctcaaggagctctacaagcagaatcgctac
ccctcgccggctgagaagcggcacctggccaagatcaccggcctctccctcacccaggtc
agcaactggttcaagaaccggcggcagcgtgaccgaaacccctccgagacccagtccaaa
agcgaatcagatggcaaccccagcactgaggatgaatccagcaagggacatgaggatttg
tctcctcatccactttcaggcacatctgatggcgtcaccaacctcagcctctctagccac
gtggagccagtatatatgcaacaaattggaaatgctaagatatcactaagctcgtctgga
gttttgttgaatggaagcttagtacctgcaagtacttcacctgtcttccttaatggcaat
tcttttattcagggacacaatggagttatccttaatggactgaatgtgggaaatacacag
acagtgtcactgaacccacccaaaatgtcttcaaacattgtgggcaatggcatagccatg
acagacatcctgggatctacctcccaggatgtgaaagaattcaaagtcctccagagttct
gctgtgaactcagcagccaccacctcctacagccctagtgcccctgtgtcattcccaggg
ctgataccctgcactgaagtaaaaagagaaggcattcagacagtggcctcccaggacggt
ggctctgtggtgacttttactacacccgtgcaaattaaccagtatggcattgtccagatc
cctaattctggagccaacggccagttccttaatgggagcattggattctctccactgcag
ctgcctcctgtctcagtagcagcttcacaaggtaatctttcagttaccccaagcacttcg
gacggaagcacatttacaagtgagccagccacagtccagcacggtaaacttttcctaagc
cctcttacccccagtgcagtggtatacaccgttcctaattcaggccagactgtaggagct
gtgaaacaggaaggcttagaaagaggcctggtcttttctcagttgatgcctgtcaatcac
agtgcacaagtaaatgcaagcctgtcttcggaaaatctctctgggagtggcctccatcca
ctgacctcgtcgttggttaatgtgtccgctgcccacggtttttccctgaccccccctaca
ctacttaatcccgctgagctcaaccctgaccttgccgagagccagcctgtgtctgcacct
gtggcaagcaaatgtactgtgtcatctgtcagcaacagtaactatgcaacccttcagaac
tgttcccttattccgggtcaagacctattgtccggcccgatgacccaggctgccctgggt
gagatcgtacccacagctgaagagcaggtgagccacgcctcgacagcagtccaccaggat
tttgtcagagaacagcgcttggttctgcagtcagtccctaacataaaagagaatttcata
caaaattctgagaacaaagcaacaaacaacttaatgatgttagactcgaaatccaagtac
gtcctggacggcatggttgaagccggctgtgaagacctaggaacggacaaaaaagagctg
gccaagctccaaaccgtccagttggatgaagacatgcaagacttataa
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