Mus caroli (Ryukyu mouse): 110307207
Help
Entry
110307207 CDS
T05910
Symbol
Six1
Name
(RefSeq) homeobox protein SIX1
KO
K15614
homeobox protein SIX1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
110307207 (Six1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110307207 (Six1)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
110307207 (Six1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
110307207
NCBI-ProteinID:
XP_021035143
Ensembl:
MGP_CAROLIEiJ_G0017840
UniProt:
A0A6P5QX52
LinkDB
All DBs
Position
12:complement(67657258..67661423)
Genome browser
AA seq
284 aa
AA seq
DB search
MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENTENNNSSSNKQNQLSPLEGGKPLMSSSEEEFSPPQSPDQNSVLLLQSNMGH
ARSSNYSLPGLTASQPSHGLQAHQHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgctgccgtcgtttggttttacgcaagagcaagtggcgtgcgtgtgcgaagtt
ctgcagcaaggagggaacctggaacgcctgggcaggttcttgtggtcgctgcccgcctgc
gatcacctgcacaagaacgagagcgtgctcaaggccaaggcggtggtcgccttccaccgc
ggcaacttccgcgagctctacaagatactggagagccaccagttctcgcctcacaatcac
cccaaactgcagcagctgtggctgaaagcgcactacgtggaggccgagaaacttcgcggc
cgacccctgggtgccgtgggcaaatatcgggtgcgccgaaaattcccgttgccgcggacc
atctgggacggcgaggagaccagctactgctttaaggagaagtctcggggcgtgctgcgg
gagtggtacgcgcacaacccctacccctcaccgagggagaaacgggagctggccgaggcc
accggcctcaccaccacccaggtcagcaactggtttaagaaccggaggcaaagagaccgg
gccgccgaggccaaggaaagggagaacaccgaaaacaataactcctcctccaacaagcag
aatcaactctctcctctggaagggggcaagccgctcatgtccagctcagaagaggaattc
tcacctccccaaagtccagaccagaactcggtccttctgctccagagcaatatgggccac
gccaggagctcaaactattctcttccaggcctcacggcctcccagcccagccacggtctg
caagcccatcagcaccagctccaggactctctgctgggcccactcacctccagtctggtg
gacttgggatcctaa
DBGET
integrated database retrieval system
