Mus caroli (Ryukyu mouse): 110307235
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Entry
110307235 CDS
T05910
Symbol
Cdhr3
Name
(RefSeq) cadherin-related family member 3
KO
K16503
cadherin-related family member 3
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110307235 (Cdhr3)
Cell adhesion molecules [BR:
mcal04515
]
Cadherins
Cadherin related
110307235 (Cdhr3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PQQ
Motif
Other DBs
NCBI-GeneID:
110307235
NCBI-ProteinID:
XP_021035167
Ensembl:
MGP_CAROLIEiJ_G0017689
UniProt:
A0A6P5QUP2
LinkDB
All DBs
Position
12:complement(29446039..29507095)
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AA seq
845 aa
AA seq
DB search
MKILCGRTHREPSSMQGAVIVLVLFGITSGGEALHLVHLPATSNVAENAPPATLVYKFSV
NLSVSLSPVIPGFPLVVNPRPFTEAFRVNRLSATNFEVVTTGKEQLDFERGPKVFDLQIY
VKDDVGVTDVQVLTVQVTDVNEPPQFQGILAQGLNLYVIERTNPGFIYQVEAFDPEDTSR
SIPLGYFLISPSKNFRMSANGTLFSTTELDFEAGHKSFNLLVGVRDSGNLEASTALQVTI
VNINDETPRFTSPRRVYSIPEEVPLGTMVANITAMDPDDEGFPGRLLYSITTTSSYFMVD
QLTGTIQVARRLDRDAGELRQNPIISLEVRVRDRPSGGQENRMQITFIVEDINDNPATCR
KLTFSIMLPERAANGTLLLDLNKFCFDDDSEAPNNKFNFTTPSGAGSSRRFSQHPAGSGR
IVLTGDLDYENPSNLAVGNEYNVIIQVQDAAPPYYKKSIYISILTSPENEFPLIFERPSY
VFDVPEGRPARTQIGQVRATDADFPRSPVVYSVSRGGSSLQYPNIFWINPKTGELQLITQ
ADHETTSVYILTVEATNGEDRSSVTVTVNILGENDEKPVCTPNFYFMAIPVDLKVGTNIQ
NFKLTCTDLDSSPSSFRYSIGSGNINNHFTFSPNAGSNITRLLLASRFDYSSLDTVWDYQ
LLVHITDDNLLSGSTKAKALVETGTVTLSVKVIPHPTTTITTPRPRITYQIRRENMYSPS
AWYVPFIVTLGSILLLGLLGSLMVLLSKAVYRHCSSTTRRDRKPLTKKRDTKRMNREAMV
ESIQMNSVFDGEAVDPVTGEIYEFNSKTGARRWKGPLTQLPNWPEPSSQHRGTAGEAPVP
KHAGR
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctctgtggccgtacacacagggagccatccagcatgcagggggcagtcatt
gtccttgttctcttcgggatcacctcaggaggggaagcgctacacctggtccacctgcct
gccactagcaacgtggcagagaacgctccacctgccactttggtgtacaagttttctgtg
aatttatcagtatcgttgtcacctgtgatcccagggtttcccttggtcgtcaacccaaga
cccttcactgaggccttcagggtgaacagactgtcagcaaccaactttgaggtggtcacc
accgggaaagaacaactagattttgaaagaggaccgaaagtattcgatttgcagatttac
gttaaggatgacgtcggtgtcacagatgtgcaagtcctgactgttcaggtgacagatgtg
aatgagcctcctcagttccaaggcatcttggcacaaggtttaaacctctatgtcatagaa
agaacaaaccctggattcatttaccaggtggaggcatttgacccagaagacacaagccgg
agcataccccttgggtatttcctcatttctccctcgaagaacttcagaatgtctgcaaat
ggcaccctcttctccaccacagaactggactttgaagcagggcacaagagcttcaacctc
cttgtgggagtgagagacagtgggaacctcgaagcctccacagcactccaggtgactatt
gtgaacatcaacgatgagaccccacgctttaccagccccaggagagtgtactccatccca
gaggaagtgcctctaggaaccatggtggcgaacatcacagcaatggatcctgatgatgag
ggttttcctggccgcctcctctacagcatcactaccaccagcagctatttcatggtagac
cagctgacagggacaatccaagtggcccgaaggctagatcgagatgcaggcgaactgaga
cagaatcccatcatttctctggaagttcgagtgagggacaggccctctgggggtcaggag
aaccgcatgcagataaccttcattgtggaagacatcaatgacaaccctgcaacatgcaga
aagctcaccttcagcattatgttgcctgaaagagcagccaacgggacgttgcttttggac
ctgaacaagttctgctttgatgatgacagcgaagctccaaacaacaaattcaactttacc
acgccatctggagcggggagcagccgcagattttcacagcatccagctggctctgggaga
attgtgttgactggtgatctagactatgaaaatccaagcaacctcgccgttggcaatgag
tacaatgtgataatccaagtgcaggatgctgctcctccatactacaaaaaaagcatctac
atctctatcctaacaagcccagaaaatgaatttcctctcatctttgaaagaccatcctac
gtgtttgatgtgccagagggaagaccagctagaacccagattgggcaggtgcgagctact
gatgcagacttcccccggagtccagtggtgtattccgtatccagaggagggtccagcctc
cagtacccaaacatattttggattaaccccaagacaggagaactccaactaataactcaa
gcagaccatgaaaccacttctgtctacattctcacggtcgaggccactaacggcgaggac
aggagctcagtcactgttactgtgaacatccttggagaaaatgacgaaaagccagtatgt
actccaaatttttacttcatggccatcccagtggatctaaaagttggcacaaacattcag
aatttcaagctgacgtgcactgaccttgattctagccccagttcttttcgatactccatt
ggctcaggcaacatcaacaatcatttcaccttctctcccaatgccggctccaacatcacg
cgcctgctgctggcttcccgctttgactacagcagccttgatactgtctgggactaccag
ctgcttgtccacattactgatgacaacttgctgtctggcagcacaaaagccaaggctctt
gttgaaacagggacagtgactctgagtgttaaagtcattcctcatccaaccacaaccatc
accactcccaggcccaggattacctaccagatccgcagggaaaacatgtactccccatct
gcatggtatgtgccgttcatcgtcactctgggatccatacttcttcttggtcttctgggg
tccctgatggtgctgctgtccaaagcagtctacagacattgctcctctacaaccaggaga
gacagaaaacctctgacaaagaaaagagacacaaaaagaatgaatagagaggccatggtg
gaatctatccagatgaactctgtctttgatggagaagccgtagatccagtgaccggggaa
atatatgaattcaactcaaaaactggtgccaggaggtggaaaggcccattaacccagctg
ccgaattggccggagcccagtagccagcacagaggcacagctggagaagcaccagtccct
aaacacgcagggagataa
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