Mus caroli (Ryukyu mouse): 110307236
Help
Entry
110307236 CDS
T05910
Symbol
Nkx2-1
Name
(RefSeq) homeobox protein Nkx-2.1 isoform X1
KO
K09342
homeobox protein Nkx-2.1
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110307236 (Nkx2-1)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
110307236 (Nkx2-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
110307236
NCBI-ProteinID:
XP_021035168
Ensembl:
MGP_CAROLIEiJ_G0017766
UniProt:
A0A6P5QMX1
LinkDB
All DBs
Position
12:complement(52098460..52103392)
Genome browser
AA seq
423 aa
AA seq
DB search
MPRLWWLPKTWRRAKTNARQPPSLHSSQLRRTRSTPLRVHPTRSALSRRRIMSMSPKHTT
PFSVSDILSPLEESYKKVGMEGGGLGAPLAAYRQGQAAPPAAAMQQHAVGHHGAVTAAYH
MTAAGVPQLSHSAVGGYCNGNLGNMSELPPYQDTMRNSASGPGWYGANPDPRFPAISRFM
GPASGMNMSGMGGLGSLGDVSKNMAPLPSAPRRKRRVLFSQAQVYELERRFKQQKYLSAP
EREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQQLQQDSGGGGGGGGGAGCPQQQ
QAQQQSPRRVAVPVLVKDGKPCQAGAPAPGAASLQSHAQQQAQQQAQAAQAAAAAISVGS
GGAGLGAHPGHQPGSAGQSPDLAHHAASPAGLQGQVSSLSHLNSSGSDYGAMSCSTLLYG
RTW
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcctctggtggctgcctaaaacctggcgccgggctaaaacaaacgcgaggcag
cccccgagcctccactcaagccaattaaggcggactcggtccactccgttacgtgtacat
ccaacaagatcggcgttaagccgacgccgaatcatgtcgatgagtccaaagcacacgact
ccgttctcagtgtctgacatcttgagtcccctggaggaaagctacaagaaagtgggcatg
gagggcggcggcctcggggctccgctcgcagcgtacagacagggccaggcggccccgccg
gccgcagccatgcagcagcacgccgtggggcaccacggcgccgtcaccgccgcctaccac
atgacggcggcgggggtgccccagctctcgcactccgccgtggggggctactgcaacggc
aacctgggcaacatgagcgagctgccgccttaccaggacaccatgcggaacagcgcttcg
ggccccggatggtacggcgccaacccagatccgcgcttccccgccatctcccgcttcatg
ggcccggcgagcggcatgaatatgagcggcatgggcggcctgggctcgctgggggacgtg
agcaagaacatggccccgctgcccagtgcgccccgccggaagcgccgggtgctcttctcc
caggcgcaggtgtacgagctcgagcgacgtttcaagcagcagaagtacctgtcggcgccg
gagcgcgagcatctggccagcatgattcacctgacacccacgcaggtcaagatctggttc
cagaaccaccgctacaagatgaagcgccaggctaaggacaaggcggcgcagcagcaactg
cagcaggacagcggcggcggcggaggcggcggtggcggtgcgggatgcccgcagcagcag
caagctcagcagcagtcgccgcgccgggtggccgtgccagtcctagtcaaagacggcaaa
ccctgccaggcgggcgcccctgccccgggagccgccagcctgcaaagccacgcgcagcaa
caagctcagcagcaggcgcaggcggcgcaagcggctgccgcggccatttcggtgggcagc
ggtggcgcgggtctaggagcacacccaggccaccagccgggcagtgcagggcagtccccg
gacctggcgcaccacgcagccagccccgcagggctgcagggccaggtctccagcctatcc
catctgaactcctcgggctcggactatggcgccatgtcttgctctaccttgctttatggt
cggacctggtga
DBGET
integrated database retrieval system
