Mus caroli (Ryukyu mouse): 110307484
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Entry
110307484 CDS
T05910
Symbol
Chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcal03036
]
110307484 (Chd6)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110307484 (Chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
HTH_CHD1_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
110307484
NCBI-ProteinID:
XP_029330232
Ensembl:
MGP_CAROLIEiJ_G0024604
UniProt:
A0A6P7QPM2
LinkDB
All DBs
Position
2:complement(152848165..153006883)
Genome browser
AA seq
2727 aa
AA seq
DB search
MKMKIQKKEKQLSKLRALNHSPMSDASVNFDYKSPSPFDCSPDQGENIEEAANHCLPHKN
LYTTEEEADTLFSRKLTSHNGMEDSGGRGTGVKKKRKKKEPGEQEGTKGSKDREPKPKRK
REPKEPKEPRRAKEPKRAKEPKETKQKDGVKKPRKHREASSTKEGKEKRSCTDYGSRTKS
KKASREQGPTPVERKKKGKRKNETTVESLELDQSLPNPSLQSPEEPSESADSQKRRSGRQ
VKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASK
TVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHI
FTEPDEDLFNPDYIEIDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPA
KVKEFESLQILPEVKHVERPASDAWQKLETSREYRNSNRLREYQLEGMNWLLFNWYNRKN
CILADEMGLGKTIQSIAFLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG
SQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH
RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD
LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF
LTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSSEASDFQLQAMIQA
AGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAA
IDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKA
VKVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKGSTNGVQQLSKMEVEDLLRKGAY
GALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDPN
FWQKWAKIAELDTEANNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTR
SRRLSDKARRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWPLNEKDMEMICRALLVYC
VKHYKGDEKIKSFIWELITPSKDGQVQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKNA
DWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPARELD
VLLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSLS
AEQGVTDGTSDIPESTRERGPCEHGRCASFRGNIDKEDSAEDKLDGLQKQTASPSDGSDG
IFGEKKDDSQAAQDGSDPDKSPWPVSSALTARLRRLVTIYQRCNRKELCRPEILGPGNQG
YWVQEEVFRRTSEMDLINKEAQKRWTRREQADFYRTVSSFGVVYDQEKKAFDWTQFRVIS
RLDKKSDESLEHYFYSFVAMCRNVCRLPAWKDDGPPDASIYVEPITEERAAKTLYRIELL
RKVREQVLMCPQLHERLQLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQ
LSFLDAYRNYAQHKRTDTQAPGSLCCLYQSNSKLYESLTYTPVSRTSESLESEPENLMRM
ESRDDHLCLPEGGLPDITCENFVSKVQEVISLDHDENLLPESLENMIYGKTGLSQEPHSF
QEAPTTNTQSRKNTITISASRNESCQPPGIEAEITSASSLMSSLEAGVAKMNIKNGKHLL
VSISKEGEPCCSETGRRPETIGHREAKCLVSPTLDTGHESGFVDLCSLSVYDPKRNFSSD
EQLIDLLENKSLESKLILHQSDEEEEENEDDTLAIVASTTEKPEVLDFPKPTVNIPRGKN
LNFHQDEAKKGRLEVVSKTAGPQRVFPPPANQCHCKHIERWAHGLGSEDSEVEKPKAYQP
DLYRSKANNTTVEGEAAIIPPETLKLKHELLKEPWKASSEGGKSFSMCVPEGSEPKPEDM
DFENKDDYEKDGTCHSQDYPGKYSEEESKSSASGVAGDLGEEAQEVRAPTIAQLLQEKTL
YSFSEWPKDRVIINRLDNICHVVLKGKWPCSHQYEPSGALPTPVLSSSAGSRSSLSEPEA
TEHSFSNGAALAAQIQKESFLAPVFTKDEQKHRRPYEFEVERDAKARSLEEYSATHGRPP
IVLNGWHGESAIDLSCSSEGSPGATSPFPVGASTPKIGAISSLQGALGMDLSGILQAGLI
HPVTGQIVNGSLRRDDAAMRRRRGRRKHIEGGMDLIFLKEQTLQAGILEVHEDAGQTTLS
TTHPEVPGAASSAPEPTAAASSQAEKAVPSKSLLDWLRQQADYSLDVPGFGTSFSDKPKQ
RRPRCKEPGKLDISSLSGEERVPAVPKEPGLRGFLPESKFNHTLAEPVIRDAGPRRRGRR
PRNELLKAPAIVADSPSGMGPLFMNGLIAGMDLVGLQNVRNIPGIPLTGLVGFPAGFATM
PTGEEVKNTLSMLPMMLPGMAAVPQMFGVGGLLNTPMATTCTTTASASLASTKSGTSATE
KSTEDKLSGHDVNTDALVDDKPGPSPFSDQSEPTITTSSPVAFNPFLIPGVSPGLIYPSM
FLSPGMGMALPAMQQARHSEMVGLETQRRKKKKTKGDSPTQEPASVCEKEPGSDQNCTES
SATVSPEREHGAQAREEGLKDSNDDTN
NT seq
8184 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaaatacagaagaaagagaagcagttgtccaagttaagagctttgaatcac
tccccaatgtcggatgcctctgttaactttgactacaaatctccgtcaccattcgattgc
agtcctgatcagggagaaaacattgaagaagctgccaatcattgtctgccccataagaac
ctctatactactgaagaggaagctgacacccttttttctaggaaattgacatcccataat
gggatggaggatagtggaggcagaggtactggagtaaagaagaaacggaagaaaaaggag
ccaggggagcaagaggggacaaagggaagcaaggacagagagcctaagccaaagaggaaa
cgagaacctaaagagccaaaagaacccagaagggccaaggagccgaagagagccaaggag
cccaaggagacaaagcagaaagatggtgtcaagaagccccggaagcaccgggaggcctcc
agtaccaaggaaggtaaagagaagaggagctgcactgattatggatccaggacaaagtcc
aagaaggccagcagggagcaaggaccaaccccagtggagagaaagaagaaaggaaaaagg
aaaaacgaaaccaccgtggagagtttagagctggaccagagtcttccaaacccatctctg
cagagtcctgaggagcccagtgagtctgcagacagccagaaacggcgctcaggacggcaa
gtaaagcgcagaaaatacaatgaggacctggacttcaaagtggtggatgatgatggggaa
acaattgctgttttgggagctggccgcacatctgcactctcggcttccactctggcctgg
caggctgaggagcctccagaagatgatgcaaacataattgagaagatcctggcatctaag
actgtccaggaggttcacccaggagaacctccatttgacctagagcttttctacgttaag
tatagaaatttttcctatttacattgtaaatgggccacaatggaagaattggaaaaggat
ccccgcatcgcacagaagatcaagcgatttaggaacaaacaggcccagatgaagcacatt
ttcactgagcctgatgaagacttgttcaatccagattatatagaaattgatcgtatctta
gaagtggcccacaccaaggatgcagaaacaggggaggaagtaacacattacctggtaaaa
tggtgctccctgccatatgaagaaagcacctgggagctagaagaagatgtggatcctgca
aaagtgaaagaatttgaatctctacaaattctccctgaagttaaacatgtggaacgacct
gcctctgatgcatggcagaaactggagacatcccgtgagtataggaacagtaaccggctg
cgagagtaccaactcgaggggatgaactggcttcttttcaactggtacaacagaaaaaac
tgtatattggctgatgaaatgggcctagggaaaaccatccagtccatcgcattcctttca
gaaatctttgtcaggggaatccacggcccctttctcatcattgccccactttccaccatc
actaactgggagcgagaattccggacatggacggagatgaatgctattgtgtaccacggc
agccagatcagcaggcagatgatccagcagtatgaaatggtatacagagacgcgcaggga
aaccccctttcaggagtcttcaagttccatgtcgtcatcacgacatttgagatgatcctg
gcagattgcccagagctgaagaaaattcactggagctgtgtgataattgatgaggcccac
agattgaagaataggaactgcaagcttctggaagggttaaagctcatggccctggaacac
aaagtgctgctcacaggaacacccttgcagaactctgtggaagagctcttcagtttgctt
aactttctagagccctcacagttcccttcagaaactgctttcttagaggagtttggcgat
ctcaaaacagaagaacaggtaaagaaattgcagtctatcctgaaaccaatgatgcttcgg
cgcctgaaagatgatgtggaaaagaaccttgctcctaagcaagagaccatcattgaagta
gaactgaccaatatccagaaaaagtactatcgtgctatcctagagaaaaacttttccttt
ctgaccaaaggtgcaaatcaacacaacatgcccaatcttatcaatactatgatggagctc
agaaaatgctgtaaccacccctacctgatcaatggggcagaggaaaagattctggaagat
ttcagaaaagcccacagctctgaagcctctgacttccagctgcaggccatgatccaggca
gcggggaagctggtgctgatcgacaagcttctccccaagctcattgcagggggccacaaa
gtgctcatcttctctcagatggtgcgctgtctcgacatcctggaagattatctcatccag
aggagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggcagcc
atcgaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcaccagagca
ggaggcctgggaatcaatctcacagctgctgatacctgcatcatatttgattctgactgg
aacccacaaaatgacttgcaggctcaggcccgatgtcatcgtataggccagagcaaagcc
gtgaaggtatatcgcctaatcactcgaaactcctatgagcgggaaatgtttgacaaggcc
agcctgaagctgggcctggacaaggctattcttcaggacatcaacagaaagggcagcacc
aatggagtacagcagctctcaaaaatggaagtggaggatttgctccggaaaggtgcttat
ggagctttaatggacgaggaagacgaaggctccaagttctgtgaggaagatatagaccag
atcctgcagagaagaacccataccatcaccatccagtcagaaggcaaggggtccactttt
gccaaggctagttttgtggcttcaggaaacagaacagatatttccttggatgaccctaat
ttttggcagaaatgggctaaaatagctgaattagacaccgaagcaaataatgaaaaggag
agcttagtgattgaccggccacgtgtgaggaagcagaccaagcactacaactcttttgag
gaggatgagcttatggagttctcagagttagacagtgactcagatgaaaggcccacaagg
tccagacgcctcagtgacaaagcccgacgctacctccgcgctgagtgcttccgagtggaa
aagaacctgctcatctttggctggggccggtggaaggacatcctgactcacgggcgattc
aagtggcccctgaatgagaaggatatggagatgatttgcagggccctgctggtgtactgt
gtcaagcattacaaaggggatgaaaaaatcaaaagttttatttgggaactaatcacacct
tccaaagatgggcaagttcagaccctgcagaaccactcaggcttgtctgccccagtcccc
agagggaggaaaggaaaaaagacaaaaaaccagctcttgctcccagaactgaagaatgca
gactggctggccacctgcaatcctgaggtggtcttacatgatgatggatacaagaaacac
ctcaaacagcactgtaataaggtgcttttgagagtccggatgctgtactacctaaaagct
gaaatactgggagaagcagctgataaagcatttgagggaactcctgccagagagctggat
gtgcttctgcctgacattgactatgtggagatcccagtggattggtgggatgctgaagct
gataagtcccttctcattggcgtgttcaagcacggttatgagaggtacaatgccatgcgg
gctgacccagcgctctgcttcctggagaaagttggcatgcctgacgagaagtccctttct
gcagagcagggtgttacagatggaacttcggacattcctgaaagcacaagagagagagga
ccttgtgagcatggtcgctgcgcttccttccgaggcaacatagataaagaagacagtgct
gaggacaagttggatggtctccagaagcaaacggcgagtcccagtgatggaagtgatggc
atttttggtgaaaagaaggatgacagccaggcagcccaggatggctccgacccagacaaa
tcaccctggccagtttcctctgccctcactgctcgactcaggcgtctggtcactatttac
cagcgctgcaaccgcaaggagctatgcagacctgaaatcttaggcccaggtaaccaagga
tactgggttcaggaggaagtgttcaggagaacttcagaaatggacctcatcaacaaggaa
gcccaaaaaaggtggactagaagagagcaagctgacttctataggacagtgtcttccttt
ggtgttgtgtatgaccaagaaaagaaagcctttgactggacacagttccgcgtcatttct
cgtttggacaagaagtcagatgagagcctggagcactatttttatagttttgtagccatg
tgtcggaatgtgtgtcgtctccccgcctggaaagatgatggtccccctgatgccagcatc
tatgttgaacccatcactgaggagcgggcagcaaagactctgtaccgtattgaactgctg
aggaaagtccgtgagcaggtgctcatgtgtcctcaactacatgagcgcctccagctttgc
aggcccagcctctacctcccagtctggtgggagtgtgggaaacatgatcgagacctgctc
attggcaccgccaaacatgggctcaaccgcactgactattacatcatgaatgacccccag
ctatccttcctagatgcctatagaaactatgcccaacacaaaagaactgacacccaggca
cctggaagtctctgctgcctttaccagagcaattctaaactatatgagtctcttacttat
accccagtgagtaggacttcagagtctcttgaaagtgagccagagaatctgatgagaatg
gaaagcagggatgatcatctctgcctgcctgagggtggcttacctgacataacgtgtgaa
aactttgtttccaaagttcaggaggtcatttctcttgaccatgatgaaaacttgctgcct
gagtctttggagaacatgatatatggtaagacaggactcagccaagagccgcattctttt
caggaggccccaactaccaacacacagtccaggaaaaatactatcaccatctcagccagc
agaaatgagagctgccagcctcctggtattgaggcagaaattacttcagcttcctctctc
atgagcagcttagaagcaggagtagctaaaatgaatattaaaaatggaaaacatttgctg
gtatctatctcaaaagaaggggagccctgctgcagtgagacaggacggagacctgaaacc
ataggccaccgagaggccaaatgcttagtgtcccctaccttagatacaggacatgaaagt
gggtttgtagatctatgtagtcttagtgtctatgaccccaaaagaaacttctcctcagat
gagcaattaattgacttattagaaaacaagagtttagaaagtaagttgattttacatcag
agtgatgaggaggaggaagaaaatgaggacgacactttagccatagtagcaagcaccact
gaaaagccagaggtcttggatttccccaagcccactgtaaacatcccaaggggaaagaac
ctcaacttccaccaagatgaagccaagaaaggaaggctggaggtggtgagcaagactgct
gggccacagagggtctttcctcccccagccaatcagtgccactgtaaacacattgaaagg
tgggcacatggcctggggagcgaggactctgaagtagagaaacccaaggcttatcagcca
gacctgtacagaagcaaagccaataatacgacagtggaaggtgaggctgctattattcca
ccagagacacttaaactgaagcatgagcttttaaaggaaccatggaaagcaagttcagag
ggggggaagagtttctccatgtgtgttcctgagggaagtgagcccaaaccagaagacatg
gattttgagaataaagatgattatgagaaagatggaacctgccacagtcaagactaccca
ggcaagtactctgaggaagagagtaagagttcggcgtcaggcgttgcaggagaccttggg
gaagaggcacaggaagtgcgggctcccaccattgctcagctactgcaggagaaaaccctc
tattccttctcagaatggccaaaggatcgtgtgataattaaccgcctagataatatttgc
catgtggtgttaaaggggaagtggccctgcagccaccagtatgagccctcaggtgcactg
cccacaccagtgttatccagcagtgcaggttctcgaagcagcctctcagagccagaggca
acagaacacagcttcagcaatggtgcagcactggcggcccagatccagaaggagagcttc
ttagccccagtcttcacaaaagatgaacaaaagcacagacgtccctatgagtttgaggtg
gaaagggatgccaaagctcggagcctagaagaatactctgccacccatgggcgtccaccc
attgtcctcaatggctggcatggagagtcagctatagacctctcctgctcctcagagggg
tctccaggagccacatctcctttcccagtgggtgccagcacccctaagattggtgctatc
agttcacttcaaggagctctcggtatggacttgtctggaattctgcaagctggtctaatc
cacccagtgactgggcagattgtcaacggaagcctcaggagggatgatgctgccatgaga
aggcggagaggaaggcgaaaacatattgaaggagggatggacctcatcttcctgaaggag
caaacacttcaggctggaatcttggaagtccatgaagatgcaggacagactaccctgagc
accacacaccctgaagtgccaggagctgcttcctcagctcctgagccaacagcagcagcc
agcagccaggctgagaaagctgttcccagcaagagcctacttgactggctgcggcagcag
gctgactactctttggatgttcctggctttgggacaagtttttcagacaaacccaagcag
agaagaccacgctgcaaagaacctggaaaattagacatcagctctctaagtggagaagag
agggttcctgctgtccccaaggagccaggactcagggggtttctcccagaaagcaaattc
aatcacacccttgctgagcctgtgattcgagatgcaggtccccgcaggagggggaggcgg
cctcgaaatgaactcctaaaagctccagccattgtagcggactctccttctggaatggga
ccactgttcatgaatgggctgattgcgggaatggacctggtaggattgcagaatgtgaga
aatattccaggcattcctctcactgggctggtgggcttcccagctggttttgccaccatg
cccactggtgaagaggttaagaacaccctgagcatgctgcccatgatgctgccaggcatg
gccgcggtaccccagatgtttggagttggcggactcctcaacacacccatggcaaccacc
tgcacgaccactgcatcagcgtctcttgcaagcacaaaaagtggtacctcagccactgaa
aaatctacagaggacaagctgagtggccatgatgtaaacacagacgctctggtagacgat
aagcctggccctagtccgttttctgatcagtcagaacccacaataactactagtagtcct
gtggctttcaacccatttctcatcccaggagtgtctcctggactcatctacccttccatg
tttctttcccctggcatgggcatggctctgccagccatgcagcaggccagacactcagag
atggtcggtcttgagacccagaggaggaaaaagaagaaaacaaagggggacagccccacc
caagagcctgcgtctgtgtgtgagaaggagccaggcagtgatcagaactgcaccgagtcc
agtgccactgtgtccccagagagagaacatggggcacaggccagggaggaggggctcaaa
gactccaatgatgataccaattag
DBGET
integrated database retrieval system
