Mus caroli (Ryukyu mouse): 110307685
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Entry
110307685 CDS
T05910
Symbol
Taf4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03022
Basal transcription factors
mcal05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110307685 (Taf4)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
110307685 (Taf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110307685 (Taf4)
03036 Chromosome and associated proteins [BR:
mcal03036
]
110307685 (Taf4)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110307685 (Taf4)
Coactivators
SAGA/TFTC/STAGA complex
110307685 (Taf4)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
110307685 (Taf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
110307685
NCBI-ProteinID:
XP_029324506
UniProt:
A0A6P7QE07
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All DBs
Position
2:complement(169435537..169500575)
Genome browser
AA seq
795 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAPRTPELRAAAAGALGN
HVVSGSPAGAAGAGPAASAEGAPAAAPEPPPAGRARPAGGGPRRPGSSSPRRLLVPAGPA
PAPAKLRPLPEAMPGALPGPAPGTPAGLAKGAAAATPSLPRTPAATTGAIRATLTPTVLA
PRLPQPPQNPTNIQNFQLPPGMVLVRSENGQLLMIPQQALAQMQAHAQAQPQSTMAPRPA
TPTGAPPVQISTVQAPGTPIIARQVTPTTIIKQVSQAQTTVQPTTTLQRSPGVQPQLVLG
GSAQPASLGTATAVQTGTPQRTVPGASTTSTAATETMENVKKCKSFLSTLIKLASSGKQS
TETAANVKDLVQNLLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKVIEGLCCPLLAGQGW
GSANEANSWLHGSVRWPLGCVCSCTMLAVPQVIQQPPKPGALIRPPQVTLTQTPMVALRQ
PHNRIMLTTPQQIQLNQLQPVPVVKPTVLPGTKALSTVSAQAAAAQKNKLKEPGGGSFRD
DDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDDTFLLPAPLQRRILEIGKKHG
ITELHPDVVSYVSHATQQRLQNLVEKISETAQQKNFSYKDDDRYEQASDVRAQLKFFEQL
DQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDANLTALA
AIGPRKKRKVDCTGPGSGAEGSGPGAAVPGGSGVGTPRQFTRQRITRVNLRDLIFCLENE
RETSHSLLLYKAFLK
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggacgaggtcttcttcaacagcgaggtggacgagaaa
gtggtgagcgatctggtgggctcgctcgagtcgcagctggcggccagcgcggcccaccac
caccacctcgcgccgcgcacgcccgagctgcgggccgcggccgccggcgcgctcgggaac
catgttgtgagcggcagcccggccggagccgcgggcgcagggccggccgcctccgccgag
ggcgcgcccgcagcggcgccggagccgccccccgcaggtagagcgcggccggcgggtggg
ggcccgcggcgcccgggctccagctcaccgcgccgcttgcttgtccccgcagggcccgcg
ccggcgcccgccaagctgaggccgctgcccgaggccatgccgggcgcgctgccggggcct
gcgcccgggacccccgcggggctggcgaagggtgcggccgcggcgacccccagcctgcct
cggacgccagcggccaccaccggcgctatccgggccacgctgacgcccaccgtgctggcc
ccgcgcctgccgcagccgccgcagaacccgaccaacatccagaacttccagctgccccca
ggaatggtcctcgtgcggagtgagaatgggcagttgttaatgatccctcagcaggccctg
gcccagatgcaggcccatgcccaggcccagcctcagagtaccatggcaccccgtcctgca
acccccacaggtgctccacctgtccagatctccaccgtgcaggctccaggaacacctatt
attgcacggcaggtgaccccaactaccataattaagcaagtgtctcaggcccagacgacg
gtacagcccactacaaccctacagcgatctcccggggtacagcctcagctggttctgggt
ggctccgcacagccagcctcacttggaacagccacagctgttcagacagggacacctcaa
cgaacagtccctggggccagcaccacctctacagctgccacggaaactatggaaaatgtg
aaaaaatgcaaaagttttctatctacattaataaaactggcttcctctggtaaacagtct
acagagacagctgctaatgtgaaagatttagtacaaaacttactggatgggaaaattgaa
gcagaagatttcactagcaggttataccgagaactgaactcttcacctcagccttacctt
gtgcctttcctgaaggtgattgagggcttgtgctgcccacttctggcagggcaaggttgg
ggtagcgccaatgaagcaaatagctggcttcatgggtcagtgcggtggcccctaggatgt
gtgtgctcatgcactatgctggctgtgccccaggtgatccagcagcccccgaagcctgga
gccttgatccggcccccgcaggtgaccttgacgcagacacccatggtcgcattgcggcag
cctcacaaccggatcatgctcaccacaccacagcagatccaactgaaccagctgcagcca
gtccctgtggtgaaacctaccgtgttacctggaaccaaagccctgtctactgtatctgca
caagcagctgctgcccagaaaaacaaactcaaggagccggggggaggctccttccgggat
gatgatgacatcaatgatgttgcgtcaatggctggagtgaacctgtctgaagaaagtgca
aggatattggccacaaactctgagttggtggggacgttgacccgatcctgtaaagacgac
accttcctcctccccgcgcctttgcagaggaggatactggagataggtaaaaagcacggc
atcacggaactgcatccagatgtagtgagttacgtgtctcatgccacacagcaaaggctg
cagaatcttgtagaaaaaatatctgaaacggctcagcagaaaaacttctcttataaggac
gacgacagatacgagcaagcgagtgatgtccgggctcagctcaaattctttgaacaactg
gatcagattgaaaagcagaggaaagatgagcaggagagggagatcttaatgcgggcagca
aagtctcgatccagacaagaagacccagagcaactaaggttgaagcagaaagcaaaagag
atgcagcagcaggagctggcacagatgcgacaacgagatgccaacctcactgcactggca
gcgatcgggcccaggaaaaagaggaaagtggactgcactgggccaggatcaggagcagag
ggctcaggcccgggcgcagcagtcccaggcggctccggcgtgggaacccccagacagttc
acacggcaaagaatcacgcgggtcaacctcagggacctcatattttgtttagaaaatgag
cgtgagacaagccattcactgttgctctacaaagcattccttaagtaa
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