Mus caroli (Ryukyu mouse): 110307826
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Entry
110307826 CDS
T05910
Symbol
Uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110307826 (Uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110307826 (Uimc1)
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
110307826 (Uimc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
UIM
Rad50_zn_hook
UIM_2
Motif
Other DBs
NCBI-GeneID:
110307826
NCBI-ProteinID:
XP_021035717
Ensembl:
MGP_CAROLIEiJ_G0018550
UniProt:
A0A6P5QYC7
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All DBs
Position
13:complement(50441468..50509527)
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AA seq
727 aa
AA seq
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MPRRKKKIKEASESQNLEKKDLETSSSVSIKKKRRLEDLLIVISDSDGEETKEENGLQKT
KTKQSNRSKCLAKRKVAHMSEDEQFALALKMSEQEAREVNNQEEKEEELLRKAIAESLNS
CWSSAASATRSRPLATGPSSHSHQENTKDSATTEGVWQLVPPSLCKGSHVSQGNEAEQRK
EPWDHNENTEEEPVSGSSGSWDQSSQPVFENENVKCFDRCTGHLAEHTQCGKPQESTGSG
YAFSKAVQGRGDTSRQCLPIPADTKGLQDTGGTVHYYWGIPFCPAGVDPNQYTNVILCQL
EVYQKSLKMAQRQLIKKRGFGEPVLPRPPFLIQNECGQEDQTSDKNEGISEDMGDEAKEE
RQESRASVWHSETKDFQKSPIKSLKQKLLLEEEPTTSRGQSSQGLFVEETSEEGLKSSEG
DNSVPTTQSIAALTSKRSLVLMPESSAEEITVCPETQLSFLEPLDLNREGSPDSRELPSE
VRMAVSGKQVANREDCTKESPPPAVSSSTRVSCPLCNQDFPPTKIEQHAMYCNGLMEQET
VLTRRRREAKNKSDGRIAAQPALDASRKEKCYLCKSLVPLGEYQCHVEACLQLAKVDRED
GIEGMRRPRVCAPVEGKQQQRLKKPKDKGHSQGRLLSLLEQSEHRTTGVEKKPKSSEVRT
FRMPSPEVEEASCSREMQSSLSQLNLNESPIKSFIPVSEATNCLVDFKDQFAFRSRTKSG
RGRRRKS
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgccacgaagaaagaaaaaaattaaagaagcctctgaaagccagaacttggagaagaag
gatctggaaacaagcagttctgtcagtataaagaagaagcgtagacttgaggacttactc
atagtgatatctgatagtgacggagaggaaacaaaagaggagaatggattgcagaaaacg
aagacaaaacagtcgaacagatcaaagtgtttggctaaaagaaaagttgcacacatgtca
gaagacgaacaatttgctttggctctcaagatgagtgagcaggaagctagggaggtgaac
aaccaggaggagaaagaagaggagctcttgcggaaagccattgctgaaagcctgaatagt
tgctggtcttctgctgcttctgctaccagatctcggcctctggctactggaccatcttca
cattcccatcaagagaacaccaaagactctgcgaccactgaaggcgtatggcagctggta
cctccatcactgtgtaaaggctcacatgtcagtcagggaaacgaggctgagcaaagaaag
gagccctgggaccacaatgaaaacactgaagaggagccggtctctggcagctcaggaagc
tgggaccagtcaagccagccagtgtttgagaatgagaacgttaaatgttttgacagatgt
actggccacttggctgagcacacacagtgtgggaagccacaggaaagtactgggagtggt
tatgctttttccaaagctgtccagggtaggggggacacgtctaggcaatgccttcctatc
ccagcagacacaaaaggtctccaggacactgggggcactgtgcactactactggggtatt
ccattctgccctgctggagtagatcccaatcaatacaccaatgtcattctctgccagtta
gaggtttatcagaagagcctgaaaatggctcagagacagcttattaaaaaaagagggttt
ggggaaccagtgttacctagacctccttttctgatccagaatgaatgtggccaagaagat
cagactagtgacaaaaatgaaggcatctcagaagatatgggagatgaagccaaagaggaa
aggcaggaatctagggcatctgtctggcactcagaaaccaaggattttcaaaaaagtcca
attaaaagcttgaaacagaaacttttgttggaggaagaaccaacaaccagtcgtggtcag
tcttcccaaggtctgtttgttgaagaaacttctgaagaaggtctgaagagttctgaagga
gacaactctgtgcccaccacgcaaagcattgcagctttgaccagtaagagaagtttagtt
cttatgccggaaagttctgcagaagaaatcactgtttgccctgagacacagttaagtttc
cttgaaccccttgacctcaatagagaaggctctccagatagcagagagctccccagtgaa
gtaaggatggcagtgagcggtaagcaggttgctaatagggaagattgtacgaaggagagc
cctcctcctgcagtctcatctagtacccgggtatcctgcccgctgtgtaaccaagacttt
cctcccacaaagattgaacagcacgccatgtactgcaatggtctgatggagcaggaaaca
gtattgactcggagacgaagagaggccaagaacaagagtgacggtaggatagctgcacag
ccagctctggacgccagcaggaaggagaagtgttatctatgtaagtccctggttccactt
ggggagtatcagtgccatgtggaggcctgtctccagcttgcaaaggttgacagagaagat
gggattgaagggatgaggagaccaagggtgtgtgcacctgtggaggggaaacaacagcag
cggctgaagaagccaaaggacaaaggccatagtcaaggccgactcctcagtctcttggag
cagtctgagcataggaccacaggtgtagagaaaaaacccaagtcttcggaagtaagaacc
ttcaggatgccctcaccagaggtggaagaggctagctgcagcagagagatgcagagttcc
ctctcacagctcaacttaaatgagtctcccatcaagtcttttattcccgtttcagaagct
acaaattgcttagtggactttaaagaccagtttgctttccggtcacgaaccaaatcaggc
agaggaaggaggagaaaatcttga
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