Mus caroli (Ryukyu mouse): 110307828 Help Entry 110307828         CDS       T05910                                  Symbol Prpf6 Name (RefSeq) pre-mRNA-processing factor 6   KO K12855   pre-mRNA-processing factor 6 Organism mcal  Mus caroli (Ryukyu mouse) Pathway mcal03040   Spliceosome Brite KEGG Orthology (KO) [BR:mcal00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     110307828 (Prpf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:mcal03041]     110307828 (Prpf6) Spliceosome [BR:mcal03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     110307828 (Prpf6)  Complex C    U5 SnRNP specific factors     110307828 (Prpf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_14 PRP1_N TPR_19 HAT_PRP39_N TPR_16 HAT_PRP39_C Suf HAT_Syf1_CNRKL1_C HAT_Syf1_CNRKL1_N TPR_17 TPR_8 TPR_CcmH_CycH FAT ARM_TT21_2nd T7SS_EccA1_N ARM_TT21_C Motif Other DBs NCBI-GeneID:  110307828 NCBI-ProteinID:  XP_029324531 Ensembl:  MGP_CAROLIEiJ_G0024814 UniProt:  A0A6P7QE61 LinkDB All DBs Position 2:171137065..171192239 Genome browser AA seq 993 aa AA seqDB search MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM KKNQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR YAVLYCVYQNNFFVVVFYLGLGGKLQYCFLMVSSGSLAGSPFPFSSSRPPPFSPLLSHWL ISSRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFAKHLQTGENHTSVDPR QTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDMRKIGQARNTLMDMRLSQVRIRHA SFLILKWGKSKIFGGCCSVVSHLPSVCNKTLNNFVPSNIYSDIKKARLLLKSVRETNPHH PPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRH LPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVE CCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIID RAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRKHTWMEDAD SCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAE VLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKA RSSAPTARVFMKSVKLEWVLGNISAAQELCEEALRHYEDFPKLWMMKGQIXEQGELMEKA REAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLEY RAGLKNIANTLMAKALQECPNSGILWSEAVFLEARPQRKTKSVDALKKCEHDPHVLLAVA KLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKRCENAEPRH GELWCAVSKDITNWQRKIGEILVLVAAGIKNTF NT seq 2982 nt NT seq  +upstreamnt  +downstreamnt atgaacaagaagaagaagccgttcctgggcatgcctgcgccgctgggctacgtacccggg ctgggcaggggtgccactggcttcaccacccgatcagacatcgggcctgctcgggatgca aacgatcctgtggatgatcgccatgccccaccagggaagagaactgtgggggaccagatg aagaaaaatcaggcggctgatgatgatgatgaagatctgaatgataccaactacgatgag tttaatggctatgctgggagcctcttctcaagtgggccctatgaaaaagatgatgaggaa gcagatgctatttatgcagctctggataaaaggatggatgaaagaagaaaagagagaagg tatgctgttctgtactgtgtttatcaaaataacttttttgttgttgtgttttatttgggg ctgggaggaaagttgcaatactgttttctcatggtgtcttctggatccctggctggatcc ccatttcctttctcctcctctcgtccacccccattctctcccctgctcagtcattggctg atcagttctaggaagctggcagaagtcacagaagaagagtggctgagcatcccagaagtt ggcgatgccagaaacaaacgtcaacggaacccacgttatgagaagttgactcctgttcct gatagtttctttgccaaacatttacagactggagagaaccatacttccgtggatccccga cagactcaatttggaggtctgaacacaccctacccgggaggcctgaacactccataccca ggtggaatgacacctggattgatgacacctggtacaggggagctggacatgaggaagatt ggccaggcaaggaataccctgatggacatgaggcttagccaggtgagaattcgtcatgca tcttttcttatactgaaatggggaaaaagcaaaatatttgggggatgttgctcagttgtt agtcacttacctagcgtgtgcaacaaaacactcaataattttgtgccttctaatatttac agtgacatcaagaaagcacgactacttctcaaatctgttcgagaaacaaaccctcatcac ccaccagcttggattgcatcagctcgcctggaagaagtcactggaaagttacaagtggct cgaaaccttattatgaaagggacagagatgtgccccaagagtgaagatgtctggctagaa gcagctaggttacagcctggggacacagccaaggctgtggtggcacaagctgtccgtcat ctcccgcagtctgttaggatttacatcagagcagcagagctagaaacagacattcgagca aagaagcgtgttcttcggaaagcacttgagcatgttccaaactctgttcgattgtggaaa gcagctgttgagcttgaagagcctgaagatgctagaatcatgctgagccgagcagtagag tgctgtcccaccagtgtagagctatggcttgctttggcaagactagaaacttacgaaaat gctcgcaaggtcttaaataaagcacgtgagaacattcctacagatcggcacatctggatc acagctgccaagctggaggaggccaacgggaacactcagatggtggaaaagatcattgac cgagccatcacctcccttcgggccaatggtgtagagatcaaccgcgaacagtggatccag gatgctgaggagtgtgacagggcagggagtgtggccacgtgccaggctgtcatgcgcgct gtaattggtattgggattgaggaggaagatcgcaaacacacctggatggaagacgctgac agttgtgtggcccacaatgccctggagtgtgcgcgagccatatatgcttatgccctacaa gtcttccccagcaagaaaagtgtgtggttacgagctgcatactttgagaagaatcatggt accagggaatctctggaagcactcttgcagagggctgtagcccactgccccaaggcagag gtgctatggctcatgggtgccaagtcaaagtggctggcaggggatgtacctgcagcaagg agcatcctggccctggcctttcaggccaaccccaacagcgaagagatctggctggcggct gtgaagctggagtcagagaacaatgaatacgagcgagcccggaggctactggccaaggct cggagcagtgcacccactgcccgtgtattcatgaagtctgtgaagctggagtgggttctg gggaacatctctgcggcgcaggagctgtgtgaagaggctctgaggcactatgaagatttc cccaagctctggatgatgaaggggcagattgangagcagggagaactgatggagaaggcc cgggaggcctacaaccaggggctgaagaaatgtcctcattccacaccgctatggctcttg ctttcccgactagaggaaaagattgggcagctgacacgtgctcgggccattttagagaaa tctcgtctgaaaaacccaaagaaccctgggctatggttggagtcagtgcggctggaatac cgggcagggctgaagaacattgccaataccctcatggccaaggcgctgcaggagtgtcct aactctggtatcctgtggtctgaagctgtcttccttgaggcaaggccccagagaaagacc aagagtgtggatgccctgaagaagtgtgaacatgacccccatgtgcttttagctgtggct aagttgttctggagtgaaaggaagatcaccaaggctcgggagtggttccatcgcactgtg aagattgactcagatctgggggatgcctgggccttcttctacaaatttgaactgcagcat ggaactgaggagcaacaggaggaggtgaggaaacgctgtgagaatgcagagccccgacat ggagagctgtggtgtgctgtgtccaaggatatcaccaactggcagaggaagattggggaa atcctagtgctggtggccgccggcatcaaaaataccttctga

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