Mus caroli (Ryukyu mouse): 110307843
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Entry
110307843 CDS
T05910
Symbol
Cdhr2
Name
(RefSeq) cadherin-related family member 2
KO
K16502
cadherin-related family member 2
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110307843 (Cdhr2)
Cell adhesion molecules [BR:
mcal04515
]
Cadherins
Cadherin related
110307843 (Cdhr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
DUF5758
Motif
Other DBs
NCBI-GeneID:
110307843
NCBI-ProteinID:
XP_021035742
Ensembl:
MGP_CAROLIEiJ_G0018543
UniProt:
A0A6P5QVZ5
LinkDB
All DBs
Position
13:50124559..50159067
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AA seq
1309 aa
AA seq
DB search
MAWLWLLCALLPAFTVSVKVNSPPSFGSNMTLVTLPEDLPVGAVAFWLVATDSDNDQLTY
GISGPNATYFSVNSSTGEVKLASPLDFETVPFFKITISASDGLNIRTAEMQVIVQDRNDN
IPVFLNTEFSTNISETLPVGSVVFSVLAEDKDTGAAGLVQYFIEKVIPSTANSNNLFRIL
ENGSIVLNDRLSYNNKSAFYQLELKACDSGGILDNKPKTQCSQPVFVSISVIDEPDLDPR
FIREFYSASVAEDATLGTSVLTVEAVDSDKGINDIVTYSVSNSTRPGWFNIRENGVIFVS
GSLDREQLLLENEEVQIQVTATEKNLNIYGQEAKASMWVTIRVTDVNDHKPEFYNCSLPG
CSFSPQEAQVNFTGYVDEHASARISIDNLTMVAYDPDQGDNGTFLLSLDGQDAEAFNVSP
ERAAGSVSVQVVVRNSEMVDYEKKTVMVVEVVATDSVSNDYSVATVTIHLRNINDHRPVF
SQSLYELTVPEHCPTGYLVTDKIQATDLDGDEWGPITYSLLPGNGADLFEVEPNSGNLTV
KNGTLLDREKQAVYYLTLQATDGGNQSTTTALEITLLDINDNPPVVRGSYNVFVPEENGN
VSVTIQAYDDDQPDTNNSLLLFSLLPGPYSSNFSLDPNTGLLRNLGPLDREAIDPALEGR
IVLTVIVADCGEPSLSTNVNVTITVEDINDNLPVFNQSSYEFFVLERVSGAWVGTVKAWD
ADQTAANNRISFSLSGTGANNFTLQGDVLEQGWAEGSLWLLPDVGLDYETQKFFHLTVSA
ENPGPQGLDSTAKVNVTVMDVNDEPPTLVAASLQAISVTENGSEHGQVAQVIAQDKDTTA
LLRIELVDVICTKAGVDVGSVCHGWFSVNDNGSVYINQSEAIDYEACHLVTLVVRAYDLN
TDPRFDAYSSNGSLLINIKDKNDNAPYFLPNNQTFVIIPELVLPNQQVASVQARDEDSED
NGIIMFSILKAEFVRKDGTTNPVQVFRITRSVEAGLFTGSIELVTNLDSTIQGTYQVTVQ
AQDQPTVGPALETQTTLNLFTVDQSYRVRLQFSTSKEDVGANVEEIKEALIQATRTSVYV
VTIQNIDSTARARASSYMDAYFVFSNGTALTLTQLNMMIRKDQDALRQLLQLGLVVVSSQ
ESQEPDQQKLLTSVIIGLVVSLVLVLVIMITALVCLRKSYHRKLRAMKAGKEARKTPIET
TAPTAAIPGTNVYNTDRANPVLDLTTKDLGLECPSSSDLDYDSLNSLDENSVDLDMDSKE
FKRKDLPGDPPEPDPEPLTAVLSGRSAGASEQQKKNLSFTNPGLDTTDL
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggcctggctgtggctgctttgtgcactgcttcctgccttcacggtatctgtgaaagtc
aactcgccaccatcgtttgggagcaatatgacattagtgaccctgccagaggacttacca
gtgggtgctgtggccttctggttggtggctacagacagtgataatgaccaactgacctat
ggaattagtggcccaaatgccacctacttctccgtcaactcaagcactggggaagtgaag
cttgccagccctttggactttgagacagttcctttcttcaagatcaccatctccgcaagt
gatggtctcaacatcagaacagccgagatgcaggtgattgtgcaagacagaaatgataac
atacctgttttcctgaacactgaattctccaccaacatcagtgagaccctgccggtcggt
tctgtggtgttttctgtgctggcggaggacaaggacacaggggcagccggtttggtgcaa
tatttcatagaaaaggtcatccccagtaccgccaacagcaataatctcttccgcatcctg
gaaaatggctccattgtactgaatgacaggctcagttacaacaacaagagtgccttctac
cagctggagctgaaggcctgtgactcagggggaatattggataacaagccaaaaacccaa
tgctcccagccggtcttcgtatccatctcagtgattgatgagccagacctggaccctcgg
tttatcagggagttctactcagcctctgtggctgaggatgccaccttggggacgtctgtg
ctgaccgtggaggctgtggacagtgacaaaggcatcaatgacattgtgacctacagtgtc
tccaactccacgaggcctgggtggttcaacatcagggaaaatggggtcatcttcgtcagt
ggctccctggacagagaacagctgcttctggaaaatgaagaagtgcagatacaggtcacg
gccaccgagaagaatctgaacatctatgggcaagaggccaaggcaagcatgtgggtcaca
ataagggtgacagatgtcaacgaccacaagccggaattttataactgcagcctcccgggc
tgctcctttagcccccaggaggcccaagtcaacttcacaggctacgtggatgagcatgcc
tctgcccgaatctccatcgataatctgaccatggtggcctatgatccagaccagggcgac
aatggtaccttcctgctgtccctggatggccaggatgctgaagccttcaatgtgtcccca
gagcgagcggcagggtctgtcagtgtgcaggtggtggtgagaaactcagagatggtggac
tacgagaagaagacagtgatggttgtggaggttgtggccactgactcagtcagcaacgac
tactctgttgccacggtgaccatccaccttagaaacatcaatgaccacaggcccgtgttc
tctcagagcctgtatgaactcactgtgccagagcactgtccaacaggttatctggtcact
gacaaaatccaggctacagacctggatggggatgaatggggtcctatcacctacagtctg
cttccaggaaatggagcagacctgtttgaggtggagccaaactcagggaatctgacggtg
aaaaatggcacgctgctggaccgggagaagcaggccgtgtactacctcacgctgcaggcc
actgacggtggcaaccagtcgaccaccaccgccctggagatcactctgttggatatcaat
gacaacccgcccgtggtccgaggctcctacaatgtctttgtgccggaggagaatggcaat
gtctctgtgaccatccaggcctatgatgatgaccagccagacactaacaacagcctcctg
ctcttcagcctgcttcctgggccctacagcagcaacttctccttagaccccaacacaggg
ctcctcaggaatcttgggcccctggaccgagaggccattgaccctgccctggagggccgc
atcgtgctaactgtgatcgtggctgactgcggcgagccttccctgagcactaatgtcaat
gtcaccatcacggtagaggacatcaatgacaacctgcctgtcttcaaccagtcttcttat
gaattctttgtgctggagagagtttcaggagcatgggtgggcacagtgaaggcctgggat
gctgaccagacggcagccaacaaccgcatcagcttcagcctgtctgggactggcgccaac
aattttaccctccaaggcgatgtgctggaacaagggtgggcagagggtagcctctggttg
cttccggatgtgggcctggattacgagacacagaagttcttccacctgacagtgagtgct
gagaacccaggcccccagggcctcgattctacagccaaagtcaacgtgacggtgatggat
gtgaatgatgagccacctaccctggtcgcagcctcactccaggccatctctgtgactgag
aatggctccgagcatggccaggtggctcaggtgatagcccaggataaggatactactgcg
ttgctgaggatagagctggtggacgtcatctgcaccaaggctggggttgacgtgggcagc
gtgtgtcatggctggttctccgtgaatgacaacggctctgtgtacattaatcagagtgag
gccatcgactatgaggcttgtcacctggtcacgctggtcgtgcgggcgtatgacctcaac
acggatccccgctttgatgcttacagcagcaatggaagccttctcatcaacatcaaggac
aagaatgacaatgccccctactttctgcctaacaaccagaccttcgtgatcatcccagag
cttgtgttgcccaaccagcaggtggcttctgtccaggccagagatgaggactcagaagac
aatgggatcatcatgttctccatcctgaaagcagaatttgtccgcaaagatggaactacc
aaccctgtccaggtcttccggattaccagatcagtggaagctggcctgttcactggcagc
atcgagctggtgaccaaccttgattctactatccaaggcacataccaggtgacagttcag
gcccaagatcagcccactgtgggtcctgccctagagacacagaccactctgaatctcttc
actgtggaccagagttaccgcgtgaggctgcagttctccaccagcaaggaggatgttggt
gccaatgtggaggagatcaaggaggctcttatccaggcgaccaggacctctgtctacgtt
gtgaccatccagaacattgactctacggctcgggcccgagccagctcctacatggacgcc
tactttgtcttttccaatgggacagccctgacacttactcagctgaatatgatgatccgg
aaagaccaggatgcactgaggcagctgctgcaactggggctggtggtggtgagctcccag
gagagccaggagcccgatcagcagaaactgctcaccagtgtcatcataggactggtggtg
tctttggtgctagtccttgtgattatgattacggccctcgtgtgtttgcggaagagctat
caccggaagcttcgagctatgaaggctggcaaggaggcccgaaagacaccaatagagacg
acagctccaactgctgctatcccggggactaacgtgtacaatactgatcgggccaacccc
gtcctggacctcaccaccaaggatctggggttggagtgcccctcctccagtgacttggac
tatgacagcctcaattccctagatgagaactctgtggacttggacatggacagtaaggaa
ttcaagaggaaggatcttccaggagaccctcctgagcctgaccctgagcccctcactgca
gtgctctcaggaaggtcggcaggtgcgagtgaacagcagaaaaagaatctgtccttcacc
aaccctggcctggacaccacagatctgtga
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