Mus caroli (Ryukyu mouse): 110307850
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Entry
110307850 CDS
T05910
Symbol
Ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03420
Nucleotide excision repair
mcal04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110307850 (Ercc8)
09124 Replication and repair
03420 Nucleotide excision repair
110307850 (Ercc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110307850 (Ercc8)
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110307850 (Ercc8)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110307850 (Ercc8)
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
110307850 (Ercc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD_LRWD1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_1st
Beta-prop_Nup120_160
Beta-prop_WDR11_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
110307850
NCBI-ProteinID:
XP_021035751
Ensembl:
MGP_CAROLIEiJ_G0018878
UniProt:
A0A6P5QYF2
LinkDB
All DBs
Position
13:101582469..101621791
Genome browser
AA seq
397 aa
AA seq
DB search
MLSFLSARQTGLEDPLRLRRAQSTRRVLGLELNKDRDVERIHGSGVNTLDIEPVEGRYML
SGGSDGVVVLYDLENASRQPHYTCKAVCSVGRSHPDVHKYSVETVQWYPHDTGMFTSSSF
DKTLKVWDTNTLQAADVFNFEETVYSHHMSPAATKHCLVAVGTRGPKVQLCDLKSGSCSH
ILQGHRQEILAVSWSPRHDYILATASADSRVKLWDVRRASGCLLTLDQHNGKKSQAVESA
NTAHNGKVNGLCFTSDGLHLLTIGTDNRMRLWNSSSGDNTLVNYGKVCNDSRKGLQFAVS
CGCSSEFVFVPHGSTIAVYAVHSGERLAMLKGHYKSVDCCVFQPNFQELYSGSRDCNILA
WVPASYEPVPDDDDEAPAKSQLNPAFADAWSSSDEDG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgttgagctttttgtccgctcgacagacgggtttggaggaccctcttcgcttgcgtaga
gcgcagtccacacggagggtcctggggctggagttaaacaaagacagggatgtggaaaga
atccatggcagtggagttaacaccctcgacattgagcccgttgaaggaagatacatgttg
tcaggtggctccgatggcgtggttgtactctatgaccttgagaacgccagcagacagccc
cattacacatgtaaagcagtgtgttccgtcggcagaagccatcccgatgttcacaaatac
agcgtggagactgttcagtggtatcctcatgacactggcatgttcacatccagctcgttt
gataaaactctgaaagtgtgggatacaaacacattgcaggctgcagatgtgtttaatttt
gaggaaacagtttacagtcatcacatgtccccagcagccaccaagcactgtctggtagca
gttggaacaagaggacccaaggtacaactttgtgacttaaagtctggatcctgttctcac
attctacagggtcacagacaggaaatattggcagtttcctggtcaccacgccatgactat
atcttggcaacagcaagtgctgacagtagagtaaaattatgggatgtgagaagagcgtca
ggatgcttgcttactcttgaccagcataatgggaagaagtcacaagctgttgagtcagca
aacactgctcacaatgggaaagttaacggcttatgttttacaagtgacggccttcacctg
ctcaccattggcacagacaaccgaatgcgcctctggaatagctccagcggggacaacaca
ctggtgaactatgggaaggtgtgtaacgacagcaggaaagggctgcagttcgcggtctcc
tgtggctgcagctcagagtttgtgtttgttccccacggcagcaccatcgccgtgtatgca
gtccactcgggagagcggctcgccatgctcaagggacattacaaaagcgtcgactgctgt
gtgttccagcctaatttccaggaactttacagtggaagcagggactgcaatattcttgct
tgggtaccagcttcctatgagccagttcctgatgatgacgatgaagctccagccaaatcc
cagttaaacccagcattcgcggacgcctggagcagcagtgacgaggatgggtga
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integrated database retrieval system
