Mus caroli (Ryukyu mouse): 110307852
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Entry
110307852 CDS
T05910
Symbol
Xrcc4
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
110307852 (Xrcc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110307852 (Xrcc4)
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
110307852 (Xrcc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4_C
XRCC4
XLF
PRKCSH
DUF6563
CMAS
Motif
Other DBs
NCBI-GeneID:
110307852
NCBI-ProteinID:
XP_021035756
Ensembl:
MGP_CAROLIEiJ_G0018756
UniProt:
A0A6P5QW12
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All DBs
Position
13:complement(83722540..83944753)
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AA seq
326 aa
AA seq
DB search
MERKISRIYLASEPNVPYFLQVSWERTIGSGFVITLTDGHSAWSATVSELEISQEADDMA
MEKGKYIDELRKALVPGSGAAGTYKFIFSKESRHFSLEKELKDVSFRLGSFNLDKVSNSA
EVIRELICYCLDTITEKQAKNEHLQKENERLLRDWNDVQGRFEKCVSAKEALEADLYQRF
ILVLNEKKTKIRSLHKLLNEVQQLEESTKPERENPCSDKTPNEVGLYEGSTDEESGAPVQ
AAETLHKDDSIFSSPDVTDIAPSRKRRHQMQKNLGTEPKMAPQELPLQEKERVASSLPQT
LKEESASAENMSLETLRNSSPEDLFD
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggaaaataagcagaatctatcttgcttctgaacccaatgtaccttattttctg
caagtgtcttgggagagaacaataggatccggctttgttattacacttactgatggccat
tcagcctggtctgcaacagtttctgaattggagatttcccaagaagctgatgacatggct
atggagaaaggaaaatacattgatgagctgagaaaggcactggtgccagggtcaggagca
gctggtacatacaagttcatcttttctaaggagtctcggcatttctcccttgagaaagaa
ctgaaagatgtttcattcagacttggttccttcaacctagacaaagtttcaaactcagct
gaagtcataagagaactcatttgttactgcctggacaccattacagaaaagcaagccaaa
aatgagcacctgcagaaagaaaatgaaaggctcctgagagactggaatgatgttcaaggc
cgatttgagaaatgtgtgagtgccaaagaagccttggaggctgatttgtatcaaagattt
atcttggtgctgaatgagaagaaaacaaagatacgaagcttgcataaattgttaaatgaa
gtccagcagctggaggagagtaccaagcctgaaagggaaaatccatgctctgacaaaaca
cctaatgaggttgggctttatgaaggaagcactgatgaagaaagtggagcccctgtgcag
gctgcagaaactcttcataaggatgattccatattttcaagtccggatgtcactgacatt
gcaccaagtaggaagaggagacaccaaatgcagaagaatcttgggacagaacctaaaatg
gctccacaggagttgccgctacaggagaaggaaagggttgcctcttcactgcctcagacc
ttgaaagaggagagcgcctctgctgaaaacatgtctttagaaaccctgagaaacagcagc
ccagaagatctctttgattag
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