Mus caroli (Ryukyu mouse): 110307932
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Entry
110307932 CDS
T05910
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03022
Basal transcription factors
mcal03420
Nucleotide excision repair
mcal05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110307932
09124 Replication and repair
03420 Nucleotide excision repair
110307932
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
110307932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110307932
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110307932
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110307932
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110307932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
110307932
NCBI-ProteinID:
XP_021035877
Ensembl:
MGP_CAROLIEiJ_G0018841
UniProt:
A0A6P5QYS9
LinkDB
All DBs
Position
13:complement(94215094..94265912)
Genome browser
AA seq
398 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEILKEDETGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHITSLKKAVDMTCNGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKTLKTAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDETHYKELLAHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDNNSTEPGLTLGGYFCPQCRAKYC
ELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYKGERFCYGCQGELKDQHVYV
CTVCQNVFCVDCDVFVHDSLHCCPGCIHKIPTPSAHHD
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaacctgagagaaccaagcggtgggaaggaggttatgagagaacctgggaa
attcttaaagaagatgaaactggatcacttaaagctacaatagaagatattctcttcaag
gcaaagaggaaaagagtgtttgagcaccatggacaagttcgacttggaatgatgcgccac
ctgtatgtggtggtggatggatcgagaacaatggaagatcaggatttaaagcccaataga
ctgacgtgcactttaaagttgctggaatactttgtagaagaatattttgatcaaaaccct
atcagtcagattggaataattgtaactaagagtaaaagagctgaaaaactgactgaactc
tcaggaaacccaaggaaacatataacatctttgaagaaagctgtagatatgacctgcaat
ggagaaccatcgctctataattccttaagcatggctatgcagaccctaaaacacatgcct
ggacatacaagtagagaagtgctaatcatcttcagcagccttaccacctgtgatccatct
aatatttacgatctcatcaagaccctgaagacagctaaaattagagtgtctgttattgga
ttatctgcggaggttcgagtttgtactgtacttgctcgtgaaactggtggcacataccat
gttatcttagatgaaacccattacaaggagttgttagcacatcatgtgagcccccctcct
gccagctcaagctccgagtgctcactcattcgcatgggattccctcagcataccattgct
tctttgtctgatcaggatgcaaaaccatctttcagcatggcgcatttggataataatagc
actgagccagggcttacattgggaggctacttctgcccacagtgtcgagcaaagtactgt
gagcttcctgttgaatgtaaaatatgtggtcttactttggtgtctgcacctcatctggca
agatcttaccatcatttatttcctttggatgcttttcaagaaattcccctagaagaatat
aaaggagaaaggttttgttatggatgtcagggggaattgaaagaccaacatgtctatgtt
tgcacagtgtgccaaaatgttttttgtgtggactgcgatgtctttgttcatgactctctc
cactgctgtcctggctgtattcataagatcccaactccttcagcgcatcatgactga
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integrated database retrieval system
