Mus caroli (Ryukyu mouse): 110307933
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Entry
110307933 CDS
T05910
Symbol
Fancc
Name
(RefSeq) Fanconi anemia group C protein isoform X1
KO
K10890
fanconi anemia group C protein
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
110307933 (Fancc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110307933 (Fancc)
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
110307933 (Fancc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_C
Motif
Other DBs
NCBI-GeneID:
110307933
NCBI-ProteinID:
XP_029324131
Ensembl:
MGP_CAROLIEiJ_G0018633
UniProt:
A0A6P7QBP6
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Position
13:complement(58644235..58764160)
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AA seq
678 aa
AA seq
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MMPRERAGPQSALRVRTTARAAPLPCDRGKIPNTSKQKSSVRPCQVFKPQKPGGGFFSAA
AQSAEAALGEDHPGRSPFPARAEKTRENVRPSLNVGEPRSRGALDLRLDGCCDGTVLFSE
MAQESADLTSDYQFWLQKLSAWEQASSKETQEDTCLHLSRFQEFLRQMYEILKEMDSDAI
LERFPTIGQLLAKACWNPLILAYDESQKLVIWCLCCLVNKEPRTSAESGLNSWIRGLLSH
VLSAFRFDMKEVCLFTKSLGYESIDYYPSLLKNMVLSLVSELRESHLNGLNTQSRMAPER
MMSLSQVCVPLVTLPDMEPLVEALLTYHGHEPQEVLAPEFFEAVNEAFLSEKIVLPTSSV
VSLWFRHLPSLEKATLHLFEKLFSSKIICLRRMECCIRESFLPQAACQPAIFRIVDEMFR
FVLLETDGAPEVLAALQVFTSCLVEALKKENKQLKFALRTYFPYGAPCLAAALSQHPEAI
PQGHRLQPLLHISQLLREAVEDCTRGSPRDPFESWFLFAHFGGWVDLAVAESLLREEAEP
PAGLLWLLVFYYSPQDGSQRREQSMVELKVLINHLLMLLRIGHLSATDLQEAAESPSGDP
RPPVCGQLVRRLLLSLLLWTPEGHAIVWEAVTHMAHTDAVIQEIIGFLDQTLYRSHHLCV
EASRKLARELLKELQAQV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgcgggagcgcgctgggccccagagtgcactgcgcgtgcgtacgaccgcgcgc
gcagccccactcccttgcgaccgcgggaaaattccaaacacgtcaaaacaaaaaagttcc
gtgaggccgtgccaagttttcaagccgcagaagccgggcggtggcttcttttccgccgcg
gcccagtctgctgaggcagctctgggtgaggaccacccgggaagatcgccgtttcctgct
agggcagagaagactcgcgagaacgtgcgcccgagtctcaacgtgggcgagccgcgctcc
cgcggcgcgctggatctgaggctggacggctgctgtgacgggacagtgctgttctcagag
atggctcaggagtctgcagaccttacttctgactatcagttttggctgcagaagctttct
gcatgggaacaggcctcttctaaggaaacccaggaggacacttgtcttcacttgtcccgg
ttccaggagttcctgaggcagatgtatgaaatcttgaaggagatggattctgatgcaatc
ctggaaaggttccccacaattggtcaactgttggcaaaagcttgttggaatcctctcatc
ttagcatatgatgaaagccaaaaacttgtaatatggtgcttatgttgtctggtgaacaaa
gaacctcggacttctgcagagtcaggacttaactcgtggatccggggtttgttatctcat
gtactttccgcattcagattcgatatgaaagaagtttgtctttttaccaaaagtcttgga
tatgagtctatcgattactatcctagtttgcttaaaaatatggttttgtcattagtgtct
gagctcagagagagtcatcttaatggattgaacactcaaagtcggatggctcctgagcgc
atgatgtccctgtcacaagtttgtgtccctcttgttactctgcctgatatggaacccctg
gtagaggctctactcacctaccatggacatgagccccaggaagtcctcgctcctgagttc
ttcgaagctgtgaatgaggccttcttgtcggaaaaaattgttctacccacgtcctctgtg
gtcagcctctggtttcggcatctccccagtcttgaaaaagcaacactgcatctttttgaa
aagcttttctccagcaagataatttgcctgagaaggatggagtgctgtataagagagtca
ttcctgcctcaagcagcctgccaacctgccatcttcagaattgttgatgaaatgttcagg
tttgtgctgctggaaactgatggagccccagaagtactagctgctcttcaggttttcaca
tcgtgcttggtagaagctctgaaaaaagaaaacaagcagctgaagtttgccctcaggacc
tactttccttacggtgctccatgtcttgctgcagcgctgtcccagcaccctgaagcaatc
ccacagggacaccggctccagcctctgctgcacatttcccaactcctcagagaagcagtt
gaagactgtactcgtgggtctccgagagatccctttgagagctggtttctgtttgctcac
tttggaggatgggttgacctggctgtggcagagtcactgctgagggaggaagctgagcct
cctgccggcctgctgtggctcttggtgttctattacagcccacaggatgggagtcagcgg
agagagcagagcatggtggagctgaaggtattaatcaaccatctcctgatgctgctcaga
atcggccacctctcagctactgatctgcaggaagcagctgagagtcccagtggagaccct
agaccacctgtatgtggacagctggtcagacgccttcttcttagtctcttgctctggacc
ccagaaggccatgcaattgtctgggaagctgtcacccatatggcccacacagatgctgta
atccaggagattattggttttcttgaccagaccttgtacagatcacatcatctttgtgtt
gaagcctcaagaaaactggcccgagagctcctaaaggagctgcaagcccaggtctag
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