Mus caroli (Ryukyu mouse): 110308306
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Entry
110308306 CDS
T05910
Symbol
Trim27
Name
(RefSeq) zinc finger protein RFP
KO
K12009
tripartite motif-containing protein 27 [EC:
2.3.2.27
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110308306 (Trim27)
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110308306 (Trim27)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110308306 (Trim27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-Tbcl_FmdE
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
110308306
NCBI-ProteinID:
XP_021036418
Ensembl:
MGP_CAROLIEiJ_G0018264
UniProt:
A0A6P5R374
LinkDB
All DBs
Position
13:16410641..16423654
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AA seq
513 aa
AA seq
DB search
MASGSVAECLQQETTCPVCLQYFVEPMMLDCGHNICCACLARCWGAAETNVSCPQCRETF
PQRHMRPNRHLANVTQLVKQLRTERPSGPGGEMGVCEKHREPLKLYCEQDQMPICVVCDR
SREHRGHSVLPLEEAVEGFKEQIQNRLDHLRRVKDLKKRRRAQGEQARAELLSLTQMERE
KIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSGLIAQLEEKQ
QQPTRELLQDIGDTLSRAERIRIPEPWITPPDLQEKIHIFAQKCLFLTESLKQFTEKMQS
DMEKIQELREAQLYSVDVTLDPDTAYPSLILSDNLRQVRYSYLQQDLPDNPERFNLFPCV
LGSPCFIAGRHYWEVEVGDKAKWTIGVCEDSVCRKGGVTSAPQNGFWAVSLWYGKEYWAL
TSPMTALPLRTPLQRVGIFLDYDAGEVSFYNVTERCHTFTFSHATFCGPVRPYFSLSYSG
GKSAAPLIICPMSGIDGFSGHVGNHGHSMETSP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgggagcgtggccgagtgcctgcagcaggagactacctgccccgtgtgcctt
cagtacttcgtggagcccatgatgctcgactgcggccacaacatctgttgcgcgtgcctg
gcccgctgctggggtgccgcggagactaacgtgtcgtgtccgcagtgccgggagaccttc
ccgcagcgccacatgcgacccaaccggcacctggccaacgtgacccaactggtgaagcag
ctgcgcaccgagcggccgtcggggcccggcggcgagatgggcgtgtgcgagaagcaccgg
gagcctctgaagctgtactgcgagcaggaccagatgcccatctgcgtggtgtgcgaccgc
tcgcgcgagcaccgcggccacagcgtgctgcccctggaggaggcggtggagggcttcaag
gagcaaatccagaaccgactggaccacctaagaagagtgaaagacttgaagaagagacgg
cgggcacagggggagcaggcccgagctgagctcttgagcctgactcagatggagagggaa
aaaattgtttgggagtttgagcagctctatcactcgttgaaggagcatgagtaccgcctg
ttggctcgccttgaggagctcgacttggccatctataacagcatcaacggggccatcact
cagttctcctgcaacatctcccacctcagtggcctgattgcccagctggaagagaagcag
cagcagcccactcgggagctcttacaggacattggagacacactgagcagggctgaaaga
atcaggatccctgagccctggatcacacccccagatctacaagagaaaatccatattttt
gcccaaaaatgtctgtttttgacagaaagtctaaaacagttcacagaaaagatgcagtca
gatatggagaagattcaagagttgagagaggctcagttatactcagttgatgtgaccctg
gacccagacacagcctatcccagtctgattctttctgataatcttcggcaagtacggtac
agttacctccagcaggatcttccagacaaccctgagcgattcaatctgtttccctgtgtc
ttgggctctccatgtttcatcgctgggagacattactgggaggtagaggtgggagataaa
gccaagtggaccataggtgtctgtgaagactcggtgtgcagaaaaggtggagtgacctca
gccccccagaatggattctgggcagtgtcattgtggtatgggaaagaatattgggctctt
acatccccaatgactgcactccccctgcggacccctctccagagggtagggattttcttg
gactatgatgctggtgaggtttccttctacaatgtgaccgagaggtgccatacctttact
ttctctcatgctaccttctgtgggccagtccggccctacttcagcctaagctactcggga
gggaagagcgcagctcctttgatcatctgccctatgagtgggattgatgggttttctggc
catgttgggaatcatggtcattccatggagacctctccgtga
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