Mus caroli (Ryukyu mouse): 110308549
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Entry
110308549 CDS
T05910
Symbol
Irx1
Name
(RefSeq) iroquois-class homeodomain protein IRX-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110308549 (Irx1)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
110308549 (Irx1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
MRP-S32
Motif
Other DBs
NCBI-GeneID:
110308549
NCBI-ProteinID:
XP_021036638
Ensembl:
MGP_CAROLIEiJ_G0018697
UniProt:
A0A6P5QR49
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Position
13:complement(66607466..66612970)
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AA seq
480 aa
AA seq
DB search
MSFPQLGYPQYLSAAGPGAYGGERPGVLAAAAAAAAAASSGRPGTAELGAGAGAAAVTSV
LGMYAAAGPYAGAPNYSAFLPYAADLSLFSQMGSQYELKDNPGVHPATFAAHTTPAYYPY
GQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
ARRRLKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESIDIDQIDERDGDQ
SNEDEEDKAEAPRARVAPPASARDQSSPLSAAETLKSQDSPLGLVKEVSEPGSTRLLSPG
AAAVGLQGAPHSKPKIWSLAETATSPDGAPKASPPPPSSHASAHGPPSGSPLQHPAFLPS
HGLYTCHIGKFSNWTNGAFLAQGSLLNMRSFLGVSAPHAAPHGPHLTAPPPPQPPVQVAT
GVLHGEKASTRSSPTLPERDLVTRPDSPPQQLKSPFQPVRDNSLAPQEGTPRILAALPSA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccgcagctgggctacccgcaatacctaagcgccgcgggcccgggcgcctat
ggtggagagcgccctggggtgctggctgcggccgcggctgctgcggccgccgcctcgtcc
ggccgtcccgggactgcggagctgggagcgggcgcgggagcggccgcggtcacctcggtg
ctgggcatgtatgccgcggcgggaccgtacgcgggcgcacccaactacagcgccttcttg
ccctatgccgcggacctcagcctcttctcgcagatgggctctcagtatgaactgaaggac
aaccccggggtgcacccagctaccttcgcagcccacacaacgcctgcttattacccctat
ggccagtttcaatacggggatcccggacggcccaagaacgccacgcgcgagagcaccagc
acgctgaaagcctggctcaacgaacaccgcaagaacccataccccaccaaaggagagaag
atcatgctggccattatcaccaagatgaccctcacacaggtctccacctggttcgccaat
gcgcgccggcgcctcaagaaggagaacaaggtgacttggggggcgcgcagcaaggaccag
gaagacggcgccctctttggcagcgacaccgagggcgaccccgagaaggccgaggacgac
gaggagatcgacctggagagcattgacatcgatcagatcgacgagcgtgatggcgaccag
agcaacgaagacgaggaggacaaggcagaggctcctagggcgcgcgtagcccctcccgcc
tcagctcgggaccagagctccccgttgtcggccgctgagacactcaagtcccaagattcg
cccttgggcctggttaaggaggtctcagagcccggcagtacacgcctgctgagtcctggc
gccgcggcggtcggcctgcagggcgcgccgcacagcaagcccaagatctggtctctggct
gagacagccactagccccgacggtgcgcctaaggcgtctccaccgccaccctccagccac
gccagcgcacacgggccgcccagcggctcacccctgcaacacccggcctttctacccagc
cacggactgtacacctgtcacataggcaagttttccaactggaccaacggcgcgttccta
gcacagggctcgctgctgaacatgcgatctttcctgggcgtcagcgcgccgcatgcagca
cctcacggcccacacctgaccgcaccacctcctccacaaccgccagtccaggttgccacc
ggggtgcttcatggtgagaaggcctccacacgcagcagtcctacacttccagagagagac
ctagtcaccagaccggattcgcccccacaacagttaaagtcgcccttccagcccgtgcgc
gacaactcgctggccccgcaggagggaacgcctcggatcctcgcagccctcccgtctgcc
tga
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