Mus caroli (Ryukyu mouse): 110308639
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Entry
110308639 CDS
T05910
Symbol
Sec16a
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110308639 (Sec16a)
Membrane trafficking [BR:
mcal04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110308639 (Sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
ExsD_M
Motif
Other DBs
NCBI-GeneID:
110308639
NCBI-ProteinID:
XP_021036722
Ensembl:
MGP_CAROLIEiJ_G0023317
UniProt:
A0A6P5QRD0
LinkDB
All DBs
Position
2:complement(22306970..22344660)
Genome browser
AA seq
2378 aa
AA seq
DB search
MQPPPQAVPSGVAGPPPAGNPRSMFWANSPYRKPANNNAPVAPITRPLQPVTDPFAFNRQ
TLQNTPVGSSSKSSLPNLPGPALSGFSQWPGLPVTPTNAGDSSTGLHEPLSGTLSQPRAD
TSLFPPASTPSSLPGLEVSRNAEVDPSSGHEVQMLPQSPHYIPGMGPEQPLGGQMNDSGS
GPDQPTNRHAPHDGAVTHTASPFLPQPQMPGQWGPAQGGPQPSYQHHSPYLEGPVQNMGP
QAASLPHFPPPSSLHQGPGHESHVPQTFTPASLASGEGNEIVHQQSKNHPLSSFPPRHTF
EQNSRIGTMWASPELKQNPGVNKEHLLDPAHVNPFAQGNSPENQAHHPPGAATNHALQEA
ASGALSMFFQGEETENEENLSSEKAGLDNRLDLDSFSSTSRLGHPPPPGASGVYQAFPRG
PSSEAAPEGDMQPYFSQSVGVRLDKQTTVTRASDSWGDIAGAGTRCAGGPQCEDVENLEF
VQNQEVLPRETLNVDPFPLSDQIRYGPLPGPAVSRPVTVGLTRGGGLNLEAPDTPLHPTR
PDSVSSSYSSHSHRSPPGSARPQELVGTFIQQEVGKLEDDTSGSFFKQIDSSPVGGETDE
VTGSQNCCSSLSQPSTPSPPKPTGVFQTSANSSFEPVKSHLVGVKPVEADRANMVVEVRG
TRYCPKKRRAAVAPPDATSGNLEQPPDNMETPCAPQACPLPLSTTGEAGQLVSHTAGTPL
DTVRPVPDKRPSARAQGPVKCESPATTLWAQNELPDFGGNVLLAPAAPALYVPVKPKPSE
VVHHPEKGVSVQKAWKQGPVPPLQKQEPPGASENLENPPKAGEEEALPVQASSAYASLLS
SPPTESLHNQPVLIAQPDQSYNLAQPINFSVSLLNPNEKNQSWGDAVVGERSIVSNNWAL
GGDPEERAALSGVPASAVTGASLPSSVPQNCAPQGSGSSEMIASQSASWLVQQLSPQIPQ
SPHPNAEKGPSEFVSSPAGNTSVMLVPPASSTSVPNSNEASHSSNQEEAVGALDFTLTRT
LENPGRMYSPSPSDGPASQQPLPSHPRQSGPGLHNQDHFYQQVTKDAQDQHRLERAQPEL
VPPRPQNSPQVPQAVCPEPSNPESPPTQGQSESLAQPPASPASVNTGQLLPQPPQTSSAS
VTSTNSSQAAVRSEQPWLHPPPPNTFGPAPQDLASYYYYRPLYDAYQSQYPSPYPSDPGT
ASLYYQDMYGLYEPRYRPYDSSASAYAENHRYSEPERPSSRASHYSDQLAPRQGYPEGYY
NSKSGWSSHSDYYANYYSGQYDYGDPSRWERYYGSRLRDPRTWDRRYWYDSEHDPYRKDH
YAYSDRPEKCDDHWRYDPRFTGSFDDDAELHRDPYGEEADRRSIHSEHSARSLRSTHSLP
SRRSSLSSHSQQSQIYRSHHVTGGSFEAPHAPGSFHGDYAYGTYASNFSGAHGFPEYSYP
ADTSWPAVEQVPSRPTSPEKFTVPHVCARFGPGGQLLKVIPNLPSEGQPALVEIHSLETL
LQHTPEQEEMRSFPGPLGKDDTHKVDVINFAQNKATKCLQNESLIDKESASLLWKFIILL
CRQNGTVVGTDIAELLLRDHRTVWLPGKSPNEANLIDFTNEAVEQVEEEESGEAQLSFLT
DSQTVTTSVLEKETERFRELLLYGRKKDALESAMKNGLWGHALLLASKMDSRTHARVMTR
FANSLPINDPLQTVYQLMSGRMPAASTCCGDEKWGDWRPHLAMVLSNLNNNMDVESRTMA
TMGDTLASKGLLDAAHFCYLMAQVGFGVYTKKTTKLVLIGSNHSLPFLKFATNEAIQRTE
AYEYAQSLGAHTCSLPNFQVFKFIYLCRLAEMGLATQAFHYCEVIAKSVLTQPAAYSPVL
ISQLTQMASQLRLFDPQLKEKPEEESFVEPAWLVQLQHVERQIQEGTVLWSQDGTEPQQC
RITSGSEVEQSDGPGFNQQAGPRADNPLLMPSTEPLMHGVQLLPTAPQTLPDGQPAHLSR
VPMFPVPMSRGPLELSPAYGSPGSALGFPESSRSDPAVLHPGQALPPTTLSLQESGPPLQ
EAKSPDPEMVPRGSPVRHSPPELSQEEFGESFADPGSSRTAQDLETSPVWDLGSSSLTHA
PSLTPDSEGKKPAQAVKKEPKEPKKTESWFSRWLPGKKRTEAYLPDDKNKSIVWDEKKNQ
WVNLNEPEEEKKAPPPPPTSFPRVPQVAPTGPAGPPTASVNVFSRKAGGSRARYVDVLNP
SGTQRSEPALAPADFFAPLAPLPIPSNLFVPNPDAEEPQPADGTGCRGQAPAGTQSKAES
TLEPKVGSSTVSAPGPELLPSKPDGSQGGELSRCSSLSSLSQEVSRHFHQAPGDHCPAGA
PPGGSVPFYNPAQLVQASVTSGNSRPGRIGQRKYAALN
NT seq
7137 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaccacctcaggcagtaccgtctggggtggctggaccacccccagctgggaat
cctcggagcatgttctgggccaacagcccttacaggaagccagccaataataatgcacca
gtggctcccataacacgcccattgcagccagtaacggatccgtttgcttttaatagacag
actcttcaaaacacaccagtaggaagttcatccaaaagcagcctgcccaatttgcctggc
ccagccctctctggtttttctcagtggcctggtttgcctgtgactcccacaaatgctggg
gatagctccacaggactgcatgagcctctgtcaggaactctgtcacagcctagagcagat
accagtctatttcctcctgcatctaccccttcttcactacctgggctggaggtgagcagg
aatgctgaggttgatcccagctcaggacatgaagtccagatgctgccacagtcacctcac
tacattccaggaatgggtcctgagcagcctctcgggggccaaatgaatgacagtgggtcc
gggcctgaccaacccacgaataggcatgccccacatgatggtgctgtgacccacacagca
tctcctttcctccctcagccacagatgccaggtcagtgggggcctgcacaaggaggcccc
cagccctcctatcagcatcactcaccctacctggagggacctgttcagaacatggggccc
caggctgccagcttgccccattttccccctccatctagtctacaccagggacctggccat
gagtctcatgtcccacaaacatttactccagcatccttggccagtggtgaagggaatgag
atagtccaccagcaaagtaaaaatcacccattgagtagcttcccccctagacacactttt
gagcagaattccagaattgggactatgtgggcaagcccagagttgaagcagaatccagga
gtgaataaagagcatctgctagaccctgcccatgtcaatcccttcgctcagggaaatagt
cctgaaaaccaggcgcatcatcccccaggggcagcaactaaccatgccctgcaagaagca
gcctctggagcgctctcaatgttttttcaaggggaagagacagagaacgaggaaaatctc
tcgtctgaaaaagcaggccttgataacagattggacttggatagcttttcttctacctcc
agactgggccatccaccaccacctggagctagtggtgtctaccaggcctttcctagaggc
cctagcagcgaggctgctccggaaggagatatgcaaccttatttttctcagtctgtgggc
gttcgtcttgacaaacagaccactgtgacccgtgctagtgatagctggggtgatattgcg
ggtgctgggacccgctgtgctggtgggccacagtgtgaggatgttgagaacttagaattt
gttcagaatcaagaagttttgccccgtgagaccctgaatgtggatccctttcccctgagt
gatcagatccgatatgggccccttcctgggccagctgtctccaggcccgttactgtgggc
ctcaccagaggtggggggctaaatcttgaggccccagacacaccactgcaccctacacga
cctgacagtgtgtcatccagctacagcagccatagccacagaagtcctcctgggtcagcc
agaccccaagaattggtgggcacattcattcagcaagaagttggaaaacttgaagatgat
acttcagggagtttttttaagcagattgattcttctcctgttggaggtgaaacagatgag
gtgactgggagccaaaattgctgcagcagtctgtcccagccttcaaccccaagtcctcca
aaacctacaggagtattccaaacaagtgcaaacagttcttttgagccagtaaaatcccac
ttggttggagtaaaaccagttgaagcagatcgtgccaacatggttgttgaagtgagaggg
acccgatactgtccgaagaaacgcagggcagctgttgcaccacctgatgccacctcagga
aacctggaacagccaccagacaacatggagaccccgtgtgcacctcaggcctgccctttg
cctcttagcaccactggagaggctgggcaactggtttcacacacagcagggacacccctg
gatactgtgcgcccagtgcctgataagaggccctcagccagggcccagggacctgtgaag
tgtgagagcccagcaacaactctgtgggcacaaaatgagctgccagattttggtggcaat
gtccttctagcccctgctgcccctgcactttatgttcctgtaaaaccaaaaccttcagag
gttgttcatcatccagaaaagggagtgtctgtacagaaggcctggaaacaagggcctgtg
ccacctttgcagaagcaagagcctcctggtgcttctgagaaccttgagaaccctcccaag
gcaggagaagaggaggcccttccagtgcaggcaagttctgcttacgcgagtttgctttct
tcgccacccactgaatctttgcacaatcaacctgtcctgattgctcagcctgatcaaagc
tataatttggctcagcccattaatttttctgtgtccttactgaatcctaatgagaagaat
cagtcctggggagatgctgtggtgggggagagatctatagtgagcaacaactgggctctc
ggtggtgatcctgaagagcgtgctgctctgtctggagttccagccagtgctgtcactggt
gcgtctttgcctagcagtgtcccccagaattgtgcccctcaaggttcggggtcttctgaa
atgattgctagccagtctgccagttggttggttcaacagctatcccctcaaatccctcaa
agtccgcatcctaatgcagaaaagggtccttccgagtttgttagtagccctgctggcaat
acaagtgtgatgctagttccacctgcaagcagtacttcggttcctaacagtaatgaggcg
agtcactctagtaaccaggaagaagctgttggcgccctagacttcacattaactagaact
ttggaaaatcctgggagaatgtacagcccatctccttcagatggcccagcttctcagcag
cctcttcccagtcatcccagacagtctgggcctgggctgcataaccaggatcatttctac
cagcaggtaacaaaagatgctcaggaccagcatagactagaaagagcccagccagagctg
gtgcctcctcggccacagaattctccccaagtgccccaagcagtgtgtccagagccttca
aatcctgaaagcccacccacacaaggacagtctgaaagcttggcccagccaccagcaagt
ccagcttcagtcaacacaggccagctgctgcctcagccaccgcagacttccagtgcatcg
gttacatctaccaactccagccaggcagctgtgcggtcagagcagccgtggctacaccca
ccaccacctaatacttttggcccagcacctcaagacttggcatcctactactattataga
cccctgtatgatgcctaccagtctcagtacccttcgccgtacccgtcagatcctgggaca
gcctcgctgtactaccaggatatgtatggcctgtatgagcctcgttacagaccctatgac
agctcagcatctgcttatgccgagaaccaccgctattctgagcctgagcggcccagctcc
cgtgcaagtcactattccgaccagctcgctcccaggcaaggatatcctgaaggatactat
aattccaagagtggatggagcagtcacagtgattactatgcaaattattactctggccag
tatgattatggagaccccagccgctgggaacgttactatgggtctcgccttagggatcct
cgcacctgggaccggaggtactggtatgactctgaacatgacccatacaggaaggaccac
tatgcttacagtgacaggcctgagaaatgtgatgatcactggaggtatgaccctcgcttc
actgggagcttcgacgacgacgctgagctccacagggacccctatggagaagaagcagac
agacgcagcatccacagcgagcactctgcacggagcctgcgcagcactcacagtctgccc
agccgccgcagcagcctcagctcccattcacagcagagtcagatttacagaagccaccat
gtgactggcggttcatttgaggcccctcatgccccaggctcatttcatggtgattatgcc
tatggcacatatgccagcaacttcagcggtgcccatggttttccagagtacagctaccct
gcagacacctcctggcctgctgtggagcaagttccatcaagaccgacctctcctgagaag
tttacggtgcctcatgtctgtgccaggtttggtcctggtggtcagctccttaaagtgatt
cccaatttgccttcagaaggacagcctgcactggtggagatccacagcttagagaccttg
ctgcagcacacacctgagcaggaagagatgcgctccttcccaggacctctcggcaaagat
gatacccacaaagtagatgttattaactttgcacagaacaaagcaacaaaatgtttgcag
aatgaaagtttaattgataaagagtctgcaagtcttctttggaaattcattattctgtta
tgcagacagaatgggactgttgtgggaacagacattgcagagcttttgttacgggaccac
agaactgtatggcttcctgggaagtcacccaatgaggcaaacctgatagattttaccaat
gaggctgtggaacaagtggaagaggaggagtcaggggaggcccagctctcctttctcaca
gacagtcagacagtgaccaccagcgtgctggagaaggagactgagcggttccgtgagctc
ttgctgtatggccggaagaaggatgctctggagtctgccatgaaaaatggcttatggggt
catgctctgctgcttgcaagtaagatggacagccggacacatgcccgtgtcatgaccagg
tttgccaacagtcttccaatcaatgaccccctgcagactgtctaccagctcatgtctgga
cggatgcctgctgcatccacgtgttgtggagatgagaagtggggagattggaggccacat
cttgcaatggttttgtccaacctgaacaacaacatggatgttgaatctaggaccatggct
acgatgggtgatactctagcatcaaaaggcctgttggatgctgcacacttctgctacctg
atggcccaggttggatttggggtttatacaaagaaaactacaaaacttgtcttgatagga
tcaaatcacagtttgccctttttaaagtttgccaccaatgaagccattcaaaggacggag
gcttatgagtatgctcagtcccttggggcacatacctgctccttacctaacttccaggtg
tttaaattcatctacttgtgccgcctggctgaaatgggacttgccacacaggccttccac
tactgcgaagtaatagccaagagtgtcctgacacagcctgcggcatactctccggtactg
attagccagttgactcagatggcttcccagttacgcctcttcgatcctcaactgaaggag
aagccagaagaggagtcctttgtggagcctgcctggttggtgcagctgcagcacgtggag
aggcagatccaggagggcactgtgctgtggagccaggatggaactgaaccccagcagtgt
cgcattacatcgggctctgaggtggagcagtcagatggccctggattcaaccagcaggca
gggccacgggccgacaaccctctactgatgccaagcactgagcctttgatgcatggcgtg
caactgctgcccacagctcctcagacattgcctgatggccagcctgctcacctttccagg
gtgccgatgttcccagtgccaatgtctcgtgggcccctggagctgagtcctgcctatgga
tccccaggatctgcacttggcttcccagaatcctccagatctgatcctgcagtgctgcat
cctgggcaggccctgccacccactacactaagtctccaggaaagtgggcctccactccag
gaggccaaaagtccagacccagaaatggtgccccggggctcacctgtcagacactcccct
ccagagctcagtcaagaggagtttggcgagagcttcgctgacccgggctcttccagaaca
gcacaggacttggaaacctccccggtgtgggatcttggcagctccagtttgacacatgca
ccatctttaacacctgattctgaagggaagaaacctgcacaggctgtcaaaaaggagccc
aaggagcccaagaagactgagtcctggttctctcgttggctacctgggaaaaaaaggaca
gaagcttatctaccagatgacaagaacaaatcaattgtttgggatgaaaagaaaaaccag
tgggtgaatttgaatgaaccagaggaggagaagaaggctccacccccacctccaacatcg
ttccccagggttccccaggtggctcccactgggcctgcaggaccacccacggcctccgtg
aatgtgttttctagaaaagcaggtgggtccagagctcgatatgtggatgttctaaaccca
agtggaacacagcggagtgaaccagctcttgctcctgcagatttctttgctcctctcgcc
ccactgccaatcccttctaacttatttgtaccaaacccagatgcagaggagccacaacct
gcagatgggactggctgtaggggacaggcaccagctgggactcagtctaaggcagagtcc
accctggaacccaaggtgggaagttctacagtatcagcccctggacctgagctcttaccc
tccaaaccagatggctcccaaggaggagagctctcgcgttgtagctctctgagctcgctc
tcacaggaagtgagccggcatttccatcaggctcctggagaccattgtcctgcaggggcc
cctcctggtgggtctgtacccttttacaaccctgctcagttggtgcaggcttctgtcacc
tcggggaattcaaggccagggaggattggccaaagaaaatatgcggcattgaactag
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integrated database retrieval system
