Mus caroli (Ryukyu mouse): 110308685
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Entry
110308685 CDS
T05910
Symbol
Notch1
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal01522
Endocrine resistance
mcal04330
Notch signaling pathway
mcal04658
Th1 and Th2 cell differentiation
mcal04919
Thyroid hormone signaling pathway
mcal05020
Prion disease
mcal05165
Human papillomavirus infection
mcal05200
Pathways in cancer
mcal05206
MicroRNAs in cancer
mcal05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110308685 (Notch1)
09150 Organismal Systems
09151 Immune system
04658 Th1 and Th2 cell differentiation
110308685 (Notch1)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
110308685 (Notch1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110308685 (Notch1)
05206 MicroRNAs in cancer
110308685 (Notch1)
09162 Cancer: specific types
05224 Breast cancer
110308685 (Notch1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
110308685 (Notch1)
09164 Neurodegenerative disease
05020 Prion disease
110308685 (Notch1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
110308685 (Notch1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
NOD
Notch
NODP
Ank_4
Ank_5
Ank_3
EGF_3
EGF_Teneurin
Gurken_M
Motif
Other DBs
NCBI-GeneID:
110308685
NCBI-ProteinID:
XP_021036757
Ensembl:
MGP_CAROLIEiJ_G0023318
UniProt:
A0A6P5QY40
LinkDB
All DBs
Position
2:complement(22356819..22402824)
Genome browser
AA seq
2531 aa
AA seq
DB search
MPRLLTPLLCLTLLPALAARGLRCSQPSGTCLNGGRCEVANGTEACVCSGAFVGQRCQDS
NPCLSTPCKNAGTCHVVDHGGTVDYACSCPLGFSGPLCLTPLDNACLANPCRNGGTCDLL
TLTEYKCRCPPGWSGKSCQQADPCASNPCANGGQCLPFESSYICRCPPGFHGPTCRQDVN
ECSQNPGLCRHGGTCHNEIGSYRCACRATHTGPHCELPYVPCSPSPCQNGGTCRPTGDTT
HECACLPGFAGQNCEENVDDCPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNTHGGYNCVCVNGWTGEDCSENIDDCASAACFQGATCHDRVASFYCE
CPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDECALGA
NPCEHAGKCLNTLGSFECQCLQGYTGPRCEIDVNECISNPCQNDATCLDQIGEFQCICMP
GYEGVYCEINTDECASSPCLHNGHCMDKINEFLCQCPKGFNGHLCQYDVDECASTPCKNG
AKCLDGPNTYTCVCTEGYTGTHCEVDIDECDPDPCHYGICKDGVATFTCLCQPGYTGHHC
ETNINECHSQPCRHGGTCQDRDNSYLCLCLKGTTGPNCEINLDDCASNPCDSGTCLDKID
GYECACEPGYTGSMCNVNIDECAGSPCHNGGTCEDGIAGFTCRCPEGYHDPTCLSEVNEC
NSNPCIHGACRDGLNGYKCDCAPGWSGTNCDINNNECESNPCVNGGTCKDMTSGYVCTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCPLPYTGATCEVVLAPCATSPCKN
SGVCKESEDYESFSCVCPTGWQGQTCEVDINECVKSPCRHGASCQNTNGSYRCLCQAGYT
GRNCESDIDDCRPNPCHNGGSCTDGINTAFCDCLPGFQGAFCEEDINECASNPCQNGANC
TDCVDSYTCTCPVGFNGIHCENNTPDCTESSCFNGGTCVDGINSFTCLCPPGFTGSYCQY
DVNECDSRPCLHGGTCQDSYGTYKCTCSQGYTGLNCQNLVHWCDSAPCKNGGRCWQTNTQ
YHCECRSGWTGVNCDVLSVSCEVAAQKRGIDVTLLCQHGGLCVDEGDKHYCHCQAGYTGS
YCEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECLSQPCQNGGTCID
LTNSYKCSCPRGTQGVHCEINVDDCHPPLDPASRSPKCFNNGTCVDQVGGYTCTCPPGFV
GERCEGDVNECLSNPCDPRGTQNCVQRVNDFHCECRAGHTGRRCESVINGCRGKPCKNGG
VCAVASNTARGFICRCPAGFEGATCENDARTCGSLRCLNGGTCISGPRSPTCLCLGSFTG
PECQFPASSPCVGSNPCYNQGTCEPTSENPFYRCLCPAKFNGLLCHILDYSFTGGAGRDI
PPPQIEEACELPECQVDAGNKVCNMQCNNHACGWDGGDCSLNFNDPWKNCTQSLQCWKYF
SDGHCDSQCNSAGCLFDGFDCQLTEGQCNPLYDQYCKDHFSDGHCDQGCNSAECEWDGLD
CAEHVPERLAAGTLVLVVLLPPDQLRNNSFHFLRELSHVLHTNVVFKRDAQGQQMIFPYY
GHEEELRKHPIKRSTVGWATSSLLPGTSGGRQRRELDPMDIRGSIVYLEIDNRQCVQSSS
QCFQSATDVAAFLGALASLGSLNIPYKIEAVKSEPVEPPLPSQLHLMYVAAAAFVLLFFV
GCGVLLSRKRRRQHGQLWFPEGFKVSEASKKKRREPLGEDSVGLKPLKNASDGALMDDNQ
NEWGDEDLETKKFRFEEPVVLPDLSDQTDHRQWTQQHLDAADLRMSAMAPTPPQGEVDAD
CMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGET
ALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILLRNRATDLDA
RMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN
GANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIV
RLLDEYNLVRSPQLHGTALGGTPTLSPTLCSPNGYLGNLKSATQGKKARKPSTKGLACGS
KEAKDLKARRKKSQDGKGCLLDSSSMLSPVDSLESPHGYLSDVASPPLLPSPFQQSPSMP
LSHLPGMPDTHLGISHLNVAAKPEMAALAGGSRLAFEPPPPRLSHLPVASSASTVLSTNG
TGAMNFTVGAPASLNGQCEWLPRLQNGMVPSQYNPLRPGVTPGTLSTQAAGLQHSMMGPL
HSSLSTNTLSPIIYQGLPNTRLATQPHLVQTQQVQPQNLQIQPQNLQPPSQPHLSVSSAA
NGHLGRSFLSGEPSQADVQPLGPSSLPVHTILPQESQALPTSLPSSMAPPMTTTQFLTPP
SQHSYSSSPVDNTPSHQLQVPEHPFLTPSPESPDQWSSSSPHSNISDWSEGISSPPTTMP
SQITHIPEAFK
NT seq
7596 nt
NT seq
+upstream
nt +downstream
nt
atgccacggctcctgacgcccttgctctgcctaacgctgctgcccgcgctcgccgcaaga
ggcttgagatgctcccagccaagtgggacctgcctgaatggagggaggtgcgaagtggcc
aacggcactgaagcctgtgtctgcagcggagcctttgtgggccaacgatgccaggactcc
aatccttgcctcagcacaccgtgtaagaatgctggaacgtgccacgttgtggaccatggt
ggcactgtggattatgcctgcagctgtcccctgggtttctctgggcccctctgcctgaca
cctctggacaacgcctgcctggccaacccctgccgcaatgggggcacctgtgacctgctc
actctcacagagtacaagtgccgctgcccaccagggtggtcaggaaaatcatgtcagcag
gccgacccctgtgcctccaacccctgtgccaatggtggccagtgcctgccctttgagtct
tcatacatctgtcgctgcccgcctggcttccatggccccacctgcaggcaagatgttaat
gagtgcagccagaaccctgggctgtgccgccatggaggcacctgccacaatgagatcggc
tcctatcgctgtgcctgccgtgccacccatactggtccccactgtgaactgccctacgtg
ccctgcagcccctcaccctgccagaatggaggcacctgccgccctacaggggacaccacc
cacgagtgtgcctgcttgccaggttttgctggacagaactgtgaagaaaatgtggatgac
tgtccaggaaacaactgcaagaatggaggtgcctgtgtggacggcgtgaatacctacaat
tgccgctgcccaccggagtggacaggtcagtactgtacagaggatgtggacgaatgtcag
ctcatgcccaatgcctgccagaatggcggaacctgccacaacacacacggtggctacaac
tgtgtgtgtgtcaatgggtggactggcgaggactgcagcgagaacattgatgactgtgcc
agtgccgcctgtttccagggtgccacttgccatgaccgtgtggcttccttctactgcgaa
tgtccacatgggcgcacaggtctgctgtgccacctcaacgatgcgtgcatcagcaacccc
tgcaacgagggctccaactgtgacaccaaccctgtcaacggcaaagccatctgcacctgc
ccctcggggtacacagggccagcctgcagccaggacgtggatgagtgtgctctgggtgcc
aacccttgtgagcacgcaggcaagtgcctcaacacactgggttcttttgagtgccagtgt
ctacagggctacacaggaccccgctgtgagattgatgttaatgagtgcatctccaacccg
tgtcagaatgatgccacttgcctggaccagattggggagttccaatgcatatgtatgcca
ggttatgaaggtgtatactgtgaaatcaacacggatgagtgcgccagcagcccctgtctg
cacaatggccactgcatggacaagatcaatgagttcctatgtcagtgccccaaaggcttc
aacgggcacctgtgccagtatgatgtggatgagtgtgccagcacaccatgcaagaatggc
gccaagtgcctggatgggcccaacacctatacctgcgtgtgtacagaaggttacacgggg
acccactgcgaagtggacattgacgagtgtgaccctgacccctgtcactatggtatctgt
aaggatggtgtggccacctttacctgcctgtgccagccaggctacacaggccatcactgt
gagaccaacatcaatgagtgccacagccaaccgtgccgccatgggggcacctgccaggac
cgtgacaactcctacctctgcttatgcctcaagggaaccacagggcccaactgtgagatc
aacctagatgactgcgccagcaacccctgtgactctggcacctgtctggacaagattgat
ggctacgaatgtgcctgcgaaccaggctacacaggaagcatgtgtaacgtcaacattgac
gaatgtgcgggcagcccctgccacaacgggggcacttgtgaggatggcatcgcgggcttc
acttgccgctgccccgagggctaccatgaccccacgtgcctgtccgaggtcaacgagtgc
aacagtaacccctgcatccacggagcttgccgggatggcctcaatgggtacaagtgtgac
tgtgcccctgggtggagtggaacaaactgtgacatcaacaacaacgagtgtgagtccaac
ccttgtgtcaacggtggcacctgcaaggacatgaccagtggctacgtatgcacctgccga
gaaggcttcagtggccctaattgccagaccaacatcaacgaatgtgcctccaacccctgc
ctgaaccaggggacctgcattgatgatgtcgctggatacaagtgcaactgtcctctgccg
tatacaggagccacgtgtgaggtggtgttggccccatgtgctaccagcccctgcaaaaac
agcggggtatgcaaggagtctgaagactacgagagtttttcctgtgtctgtcccacaggc
tggcaaggtcaaacctgcgaggttgacatcaacgagtgtgtgaaaagcccatgtcgccat
ggagcctcctgccagaacaccaatggcagctaccgctgcctctgccaggccggctataca
ggtcgcaactgtgagagtgacatcgatgattgccgccccaacccgtgtcacaatgggggt
tcctgcaccgatggcatcaacacagccttctgcgactgcctgcccggcttccagggtgcc
ttctgtgaggaggacatcaacgaatgtgccagcaatccctgccaaaatggtgccaattgc
actgactgtgtggacagttacacgtgtacctgccccgtgggcttcaacggcatccactgc
gagaacaacacacctgactgtactgagagctcctgcttcaatggtggtacctgtgtggat
ggtatcaactccttcacctgtctgtgtccacctggcttcacgggcagctactgccagtat
gatgtcaatgagtgtgattcacggccctgtctgcacggtggcacctgccaagacagctat
ggtacctataagtgtacctgctcacagggctacactggtctcaactgccagaaccttgtg
cactggtgcgactcggctccctgcaagaatggtggcaggtgctggcagaccaacacgcag
taccactgtgagtgccgcagcggctggactggcgtcaactgcgacgtgctcagtgtgtcc
tgtgaggtggctgcacagaagcgaggcattgacgtcactctcctgtgccagcatggaggg
ctctgtgtggatgagggagataaacattactgccactgccaggcaggctacacgggcagc
tactgtgaggacgaggtggacgagtgctcacctaacccctgccagaacggggctacctgc
actgactatctcggtggcttttcctgcaagtgtgtggctggctaccatgggtctaactgc
tccgaggagatcaacgagtgcctgtcccagccctgccagaatgggggtacctgcattgat
ctgaccaactcctacaagtgttcctgcccccgggggacacagggtgtacactgtgagatc
aatgttgatgactgccatcccccccttgaccctgcctcccgaagccccaagtgcttcaac
aatggcacctgtgtggaccaggtgggtggctatacctgcacctgcccaccaggcttcgtc
ggggagcggtgtgagggtgatgtcaatgagtgtctctccaacccctgtgacccacgtggc
acccagaactgtgtgcagcgtgttaatgacttccactgcgagtgccgggctggccacact
ggacgccgctgtgagtcagtcatcaatggctgcaggggcaaaccgtgcaagaatgggggt
gtctgtgccgtggcctctaacaccgcccgtggattcatctgtaggtgccctgcgggcttc
gagggtgccacatgtgagaatgatgcccgcacttgtggcagcttgcgctgcctcaacggt
ggtacatgcatctcgggcccacgtagtcccacctgcctctgcctgggatccttcaccggc
cctgagtgccagttcccagccagcagcccctgtgtgggtagcaacccctgctacaatcag
ggcacctgtgagcccacatctgagaaccctttctaccgctgtctatgccctgccaaattc
aacgggctactgtgccacatcctggactacagcttcacaggtggcgctgggcgcgacatt
cccccaccacagattgaggaggcctgtgagctgcctgagtgccaggtggatgcaggcaat
aaggtctgcaacatgcagtgtaataatcacgcatgtggctgggatggcggtgactgctcc
ctcaacttcaatgacccttggaagaactgcacgcagtccctacagtgctggaagtatttt
agtgacggccactgtgacagccagtgcaactcggccggctgcctctttgatggcttcgac
tgccagctcaccgagggacagtgcaaccccctgtatgaccagtactgcaaggaccacttc
agtgatggccactgcgaccagggctgtaacagtgccgaatgtgagtgggatggcctagac
tgtgctgagcacgtacccgagcggctggcagccggcaccctggtgctggtggtgctgctt
ccacccgaccagctacggaacaactccttccacttcctgcgggagctcagccacgtgctg
cacaccaacgtggtcttcaagcgtgatgcgcaaggccagcagatgatcttcccgtactat
ggccacgaggaagagctgcgcaagcacccaatcaagcgctctacagtgggttgggccacc
tcttcactgcttcctggtaccagtggtgggcgccagcgcagggagctggaccccatggac
atccgtggctccattgtctacctggagatcgacaaccggcaatgtgtgcagtcatcctcg
cagtgcttccagagtgccaccgatgtggctgccttcctaggtgctcttgcatcacttggc
agcctcaatattccttacaagattgaggccgtaaaaagtgagccggtggagcctccgctg
ccctcgcagctgcacctcatgtacgtggcagcggccgccttcgtgctcctgttctttgtg
ggctgtggggtgctgctgtcccgcaagcgccggcggcagcatggccagctctggttccct
gagggtttcaaagtgtcagaggccagcaagaagaagcggagagagcccctcggcgaggac
tcagtcggcctcaagcccctgaagaatgcctcagatggtgctctgatggacgacaatcag
aacgagtggggagacgaagacctggagaccaagaagttccggtttgaggagccagtagtt
ctccctgacctgagtgaccagactgaccacaggcagtggacccagcagcacctggacgct
gctgacctgcgcatgtctgccatggccccaacaccgcctcagggggaggtggatgctgac
tgcatggatgtcaatgttcgaggaccagatggcttcacacccctcatgattgcctcctgc
agtggagggggccttgagacaggcaacagtgaagaagaagaagatgcacctgctgtcatc
tctgacttcatctaccagggcgccagcttgcacaaccagacagaccgcaccggggagacc
gccttgcacttggctgcccgatactctcgttcagatgctgcaaagcgcttgctggaggcc
agtgcagatgccaacatccaggacaacatgggccgtactccgttacatgcagcagtttct
gcagatgctcagggtgtcttccagatcctgctccggaacagagccacagatctggatgcc
cgaatgcatgatgggacaactccactgatcctggctgcgcgcctggccgtggagggcatg
ctagaggacctcatcaactcacatgctgatgtcaatgccgtggatgacctaggcaagtcg
gctttgcattgggcagccgctgtgaacaatgtggatgctgctgttgtgctcctgaagaac
ggagccaacaaagacatgcagaacaacaaggaggagacccccctgttcctggccgcccgt
gagggcagctatgagactgccaaagtgttgctggaccactttgccaaccgggacatcacg
gatcacatggaccgattgccgcgggacatcgcacaggagcgtatgcaccatgatatcgtg
cggcttttggatgagtacaacctggtgcgcagcccacagctgcatggcactgccctgggt
ggcacacccactctgtctcccacactctgctcgcccaatggctacctgggcaatctcaag
tctgccacacagggcaagaaggcccgcaagcccagcaccaaagggctggcttgtggtagc
aaggaagctaaggacctcaaggcacggaggaagaagtcccaggatggcaagggctgcctg
ttggacagctcgagcatgctgtcgcctgtggactccctcgagtcaccccatggctacttg
tcagatgtggcctcgccacccctcctcccctccccattccagcagtctccatccatgcct
ctcagccacctgcctggtatgcctgacacccacctgggcatcagccacttgaatgtggca
gccaagcctgagatggcagcactggctggaggtagccggttggcctttgagccacccccg
ccacgcctctcccacctgcctgtagcctccagtgccagcacagtgctgagtaccaatggc
acgggggctatgaatttcactgtgggtgcaccggcaagcttgaatggccagtgtgagtgg
cttccccggctccagaatggcatggtgcccagccagtacaacccactacggccgggtgtg
acgccgggcacactgagcacacaggcagctggcctccagcatagcatgatggggccacta
cacagcagcctctccaccaataccttgtccccgattatttaccagggcctgcccaacaca
cggctggccacacagccccacctggtgcagacccagcaggtgcagccacagaacttacag
atccagcctcagaacctgcagccaccatcgcagccacacctcagtgtgagctcggcagcc
aatgggcacctgggccggagcttcttgagtggggagcccagccaggcagatgtacaaccg
ctgggccccagcagtctgcctgtgcacaccattctgccccaggaaagccaggccctgccc
acatcactgccatcctccatggccccacccatgaccactacccagttcctgacccctcct
tcccagcacagctactcctcctcccctgtggacaacacccccagccaccagctgcaggtg
ccagagcaccccttcctcaccccatcccctgagtcccctgaccagtggtccagctcctcc
ccgcattccaacatctctgattggtccgagggcatctccagcccgcccaccaccatgccg
tcccagatcacccacattccagaggcatttaaataa
DBGET
integrated database retrieval system
