Mus caroli (Ryukyu mouse): 110308686
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Entry
110308686 CDS
T05910
Symbol
Otp
Name
(RefSeq) homeobox protein orthopedia
KO
K24901
homeobox protein orthopedia
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110308686 (Otp)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
110308686 (Otp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
110308686
NCBI-ProteinID:
XP_021036756
Ensembl:
MGP_CAROLIEiJ_G0018791
UniProt:
A0A6P5R0U8
LinkDB
All DBs
Position
13:88535124..88544594
Genome browser
AA seq
325 aa
AA seq
DB search
MLSHADLLDARLGMKDAAELLGHREAVKCRLGVGGSDPGGHPGDLAPNSDPVEGATLLPG
EDITTVGSTPASLAVSAKDPDKQPGPQGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNELE
RSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGTLLPTPG
LPQFPSAAAAAAAAMGDSLCSFHANDTRWAAAAMPGVSQLPLPPALGRQQAMAQSLSQCS
LAAGPPPNSMGLSNSLAGSNGAGLQSHLYQPAFPGMVPASLPGPSNVSGSPQLCSSPDSS
DVWRGTSIASLRRKALEHTVSMSFT
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctcacgccgacctcctggacgccaggctaggtatgaaagatgccgccgagctt
ctgggccaccgggaggcggtgaagtgtaggctgggtgtggggggctctgaccctgggggc
catccaggggacctggcacccaactcggacccggtcgaaggagccactctgctgccaggc
gaggacatcaccaccgtgggctctactcctgcttcgctggcggtgagcgccaaagaccca
gacaagcagccggggccccagggcggccccaaccctagccaagccggccaacagcagggc
caacagaaacagaagcgccaccggacacgcttcaccccagcacagctcaacgaattggag
aggagcttcgccaagactcactaccccgacatcttcatgcgtgaggagctagcgctgcgt
atcgggctgaccgagtcgcgggtgcaggtctggttccagaatcgccgcgccaagtggaag
aagcgcaagaagaccaccaacgtgttccgcgcgcccggcacgctgctgcccacgccgggg
ctgccccagttcccgtcggccgccgccgccgcggccgccgccatgggcgacagcctgtgc
tctttccacgccaacgacacccgctgggcggcggccgccatgcctggcgtgtcccagctg
ccgctgccgcccgcgctcggtcgccagcaggccatggcgcagtcgctgtcccagtgcagc
ctggcggccgggccaccgcccaactccatgggcttgtccaacagcctggcgggctccaac
ggcgcggggctgcagtcgcacctctaccagcccgccttccccggcatggtgcccgcctcc
ctccccggccccagcaacgtctccggctcgccccagctctgcagctctccggacagcagc
gatgtgtggcggggcacgagcatcgcctccctgcgccgcaaggcgctcgagcacacagtc
tccatgagcttcacctaa
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