Mus caroli (Ryukyu mouse): 110308915
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Entry
110308915 CDS
T05910
Symbol
Zswim8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110308915 (Zswim8)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
110308915 (Zswim8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
Motif
Other DBs
NCBI-GeneID:
110308915
NCBI-ProteinID:
XP_021036930
Ensembl:
MGP_CAROLIEiJ_G0018998
UniProt:
A0A6P5QYG4
LinkDB
All DBs
Position
14:13480410..13496240
Genome browser
AA seq
1903 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTGGGGG
GGSGGTRTRDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDI
RLYSCLANGSADEFQRGDQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDR
CRVTSCSCTCGAGAKWCTHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLI
SELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLTDNIKK
TLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKR
RDSNAAPLLEILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMC
DEMVTLWRLAVLDPALSPQRRRELCAQLRQWQLKVIENVKRGQHKKTLERLFPGFRPAVE
ACYFNWEEAYPLPGVTYSGTDRKLALCWARALPARPGASRSGGLEESRPRPLPTEPAVRP
KEPGAKRKGLGEGISSQRGPRRLSAEGDKALHKMGPSGGKAKVLGGTGSGGKSSAGSGSK
RRLSSEDSSLEPDLAEMSLDDSSLALGAEASTFGGFPESPPPCPSSVGSRGPSTFLPEPP
DTYEEDAGVYFSEGPEPPTASVDHPGLLPGEVCTRDDLPSTDDSGSGLHKTKETAPAVGE
EDDDYQAYYLNAQDGAGGEEEKAEGGTGEEHDLFAGLKPLEQESRMEVLFACAEALHAHG
YSNEASRLTVELAQDLLANPPDLKVEPPPAKGKKNKVSTSRQTWVATNTLTKAAFLLTVL
SERPEHHSLAFRVGMFALELQRPPASTKALEVKLAYQESEVAALLKKIPRGPSEMSTIRC
RAEELREGTLCDYRPVLPLMLASFIFDVLCAPVVSLTGSRPPSRNWTNEMPGDEELGFEA
AVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQAKLKKILDKLLDRESQTH
KPQTLSSFYSSSRPATANQRSPSKHGAPSAPGALQPLTSSSAGPAQPGNVAGAGPGPAEG
FTEKNVPESSPHSPCEGLPPEAALTPRPEGKVPSRLALGSRGGYNGRGWGSPGRPKKKHT
GMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSSSGSR
RASASGGARAKTVDVGRCYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSST
SIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEI
GSAALTILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNEIQ
RALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWFWLYEETAGGSSTAREGA
TSCSGSGMRAAGEAGRGLPEGRGAPGTEPVTVAAAAVTAAATVVPVISVGSSLYPGPGLG
HGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVPSSAYPQGVHPAFLG
AQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACEFRGQGTVSSVHPA
STFPAIQGASLPALTTQPSPLVSGGFPPPEEETHSQPVNPHSLHHLHAAYRVGMLALEML
GRRAHNDHPNNFSRSPPYTDDVKWLLGLAAKLGDRHGDAAAAEPHSCPQPPSSPGLPSTG
AALSAGIHAVHPSPLNSPDSCRLRRLCECNPQRSQRLLPDTHGHDAVQRHPTEPQTQQTD
QGVVAAGLSGDNHLLPLSLVPVGPYLGTQACGYGEPSHRGSGDSWLDRSSPLNSLVAQTG
SCSWAVAWGQDVSDLRSLGLGETALSGRGRWVASGIYLAFINI
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atggagctgatgttcgcggagtgggaggacggcgagcgcttctcgtttgaggattccgac
cgctttgaggaggattcactctgttcgttcatttccgaggccgagagcctttgccagaac
tggcgaggatggcgcaaacagtcagcggggcccaattcccccactggaggcggtggcgga
ggtggcagtggcggtaccagaacgcgagatggattggtaatcccattggtggagctgtca
gcaaagcaggtggcatttcacatcccatttgaagtcgtagagaaagtttatcctccagtg
ccagaacaactccaactccgaattgctttttggagcttccctgagaatgaagaggacatt
cgtctgtattcatgcctagccaatggcagcgcggatgagtttcagcgaggggatcagctg
ttccgaatgagggctgtgaaagacccactgcagatagggttccatctgagcgccacagtg
gtgccaccgcagatggtccctcccaagggggcctacaatgtagctgtgatgtttgaccgc
tgccgggtcacttcctgtagctgtacctgtggggctggggccaaatggtgcacccatgtc
gtggccctctgcctcttccgcattcacaacgcatctgcagtctgcctgcgggctccagtc
tcagagtccctgtctcggctacaaagggaccagcttcaaaaatttgctcagtaccttatc
agtgagcttcctcagcagattctccccacagcccagcgtcttctagacgagctcctttcc
tcccagtccacagccatcaacacagtgtgtggggctccggaccctacagcagggccctca
gcttcagaccagagcacttggtatttggatgagtcaacactcactgacaacataaagaag
acactacataagttctgtggcccctcccctgtggtcttcagtgatgtaaactctatgtat
ctctcttccacggaacctcctgctgctgctgaatgggcatgtctgctgcggcctctgagg
ggtcgagagcctgagggtgtctggaacctgcttagcattgttcgagagatgttcaagcga
agggacagcaatgctgcccccttgctggaaatactcactgaccagtgcctcacctatgaa
cagataacaggctggtggtatagtgtgcgcacctcagcttcacacagcagtgccagtggt
cacacaggccgtagcaatgggcagtcagaggtagcagcccatgcatgtgcaagtatgtgc
gacgagatggttaccctctggaggctggctgtgctggaccctgccctcagccctcagcgc
cgccgggaactgtgtgcacagctgcgtcagtggcaactgaaggtgattgagaatgtcaag
cggggccagcacaagaagaccttagagaggctcttccctggcttccggccagctgtggag
gcctgctactttaactgggaagaggcttatcctcttcctggtgttacctacagtggcact
gaccggaagctagccctgtgctgggcccgggccctgcctgctaggccaggagcgtctaga
tctgggggcctggaagagtcccggccccgacctcttcctactgagccagctgtgaggccc
aaggaacctggggccaaacgcaaaggattgggtgaggggatctcctcacagcggggcccc
cgccgcctctctgcagaaggagataaggctctgcataagatgggtccaagtgggggcaaa
gccaaggtactcgggggaactggcagcgggggcaagagctcagcaggcagtgggagcaaa
cggcggctaagcagtgaagacagctccctggaaccagacctggcagagatgagcctggat
gacagcagcctggccctgggtgcagaggccagcacctttggtggattccctgagagccct
ccaccctgtccttcctccgttggctccagaggaccttccaccttccttcctgagccccca
gatacttatgaggaagatgctggtgtatacttttcagaagggcctgagcctcccacagcc
tctgtagaccaccctggtctgctgcctggggaggtctgtacccgagatgacctcccttca
acagacgacagtggcagtgggctacacaaaaccaaagaaacagctcctgcagttggagag
gaggatgacgactaccaagcatattacctgaatgcccaggatggggctggaggcgaggag
gagaaggcggagggcgggactggggaggaacatgacctgtttgctggtttgaagccactg
gaacaggagagccgaatggaggtgttgtttgcctgcgctgaggccctgcatgcccatggc
tacagcaatgaggcctcccgcctcactgtggagcttgcccaggacctgctagccaaccca
cctgacctcaaggtagagccgccccctgccaagggcaagaaaaacaaggtgtccacaagc
cgtcagacctgggtggctaccaacactctgaccaaagcagccttcctgttgacagtgctt
agtgagcgccccgagcaccacagcctggccttccgagttggcatgtttgcgctggagcta
cagcggcctcctgcttcaaccaaggccttggaggtaaagttggcatatcaggaatctgag
gtagctgctctgctcaagaagatccctcgcggccccagtgaaatgagcaccattcggtgc
cgggcagaagaacttcgggagggtacactgtgtgactatcggcctgtcttgcccctcatg
ttggccagtttcatctttgatgttctctgtgctccagtggtttctctcacgggttcccgg
cccccaagtcgaaactggactaatgagatgcctggagatgaggagctaggatttgaagca
gcagttgctgccttaggcatgaagacaacagtgagtgaggcagaacatcccctcctatgt
gaaggcacacgtcgggagaagggtgacctggccttagcactcatgatcacctacaaggat
gaccaggccaagctcaagaagatcctagacaaactcttggaccgagaaagccagacacat
aagccacagaccctgagttctttctactcatctagccggccagccacagccaaccagaga
tctccttcaaagcacggggccccatctgctcccggagccctgcagccactgacttcaagc
tctgcagggcctgctcagccagggaatgtggcaggggctgggccaggtcccgctgagggc
ttcacagagaagaatgtgcccgaaagttccccacattccccctgtgaaggtctcccacct
gaggcagctttgactccacggccggaggggaaggttcctagccgcctagcacttggcagt
cgtggaggttataatggtcgaggttggggctctccagggcggcccaaaaagaaacacaca
ggcatggccagcattgacagcagtgcccctgaaaccacatcggacagctctcctacctta
agccgacggccacttcgagggggctgggctcctacatcctggggtcgaggacaagacagt
gacagcattagcagctcttcctcagactctctgggctcttcatcctccagtggaagccgc
cgggctagtgccagtggaggggcccgggcaaagacagttgacgttggcaggtgttacaaa
ggccgccgccctgagagtcatgccccccacgtacccaatcagccgtcagaggcagctgca
cacttctacttcgaattggcgaagacagttctgatcaaggcagggggcaacagcagcacc
tccattttcacacatccatcttcctcaggaggccaccagggtcctcaccgcaacctgcac
ctttgcgcctttgagattgggctttatgccctaggcctgcataactttgtctctcctaac
tggctctctcgtacctattcttcccatgtatcctggattacagggcaggccatggagatt
ggcagtgcagccttgactatactggtggaatgctgggatgggcacctgacacccccggag
gtcgcatcgctggccgacagagcgtcacgggcacgagactccaacatggtgagggcagcg
gcagagctggctctaagctgcctgcctcatgcccacgcactgaaccccaatgagattcag
cgggccttggtgcagtgcaaggaacaggataacctgatgttggagaaggcctgcatggct
gtggaagaggcagccaagggtgggggcgtataccctgaagtgctgtttgaggttgctcat
cagtggttctggctttatgaggagacagcaggcggctcgtccacagctcgtgaaggggct
acaagctgtagtggcagtgggatgagggccgctggggaggctgggcggggactccctgag
ggtaggggtgccccagggactgaacctgttacagtggctgcggcggcagtgacagcagca
gccacagtggttccagtcatctcagtggggtccagtttatatccaggtccaggactgggg
catggtcactctcctggcctgcacccctacactgctctccagccccacttgccctgcagc
cctcagtacctcacccacccagctcaccctgcccaccctatgcctcatatgccccggcct
gccgtcttccctgtgcccagctctgcatacccacagggtgtgcatcctgcattcctgggg
gctcagtacccttactcagtgactcctccctcgcttgctgccacagctgtatctttccct
gtcccttccatggctcccatcacagtccatccttaccacacagaaccagggctcccactg
cccaccagtgtggcttgtgagtttcggggacagggaacagtgagcagtgtccatccagca
tctacgtttccagccatccagggtgcctcactgcctgctctgaccacacagcccagccct
ctggtaagcgggggttttccaccacccgaagaggagacacacagtcaaccggtcaatcca
catagcctgcaccatctgcatgctgcttaccgtgttgggatgctggcactggagatgcta
ggtcgccgggcacacaacgatcaccccaacaacttttcccgctcccccccttacactgat
gatgtcaaatggttgctggggctggcagcaaagctgggagatcgtcatggagacgctgca
gcggctgaaccccattcatgcccacaaccaccttcgagccccggccttccatcaactggt
gcagcgctgtcagcaggcatacatgcagtacatccatcaccgcttaattcacctgactcc
tgccgactacgacgactttgtgaatgcaatccgcagcgctcgcagcgccttctgcctgac
acccatgggcatgatgcagttcaacgacatcctacagaacctcaaacgcagcaaacagac
caaggagttgtggcagcgggtctctctggagataaccaccttctccccctgagtctggtc
cctgtagggccctatttagggacacaggcctgtggctatggggagccctcacacagaggg
tcaggcgactcttggctggacagatcatccccactcaattcccttgtagcccagactggc
agctgctcttgggctgtagcttggggccaagatgtctcagaccttagaagtctagggttg
ggggagacagctttgtctgggagagggcgttgggtggcctctggtatttatttggcattt
ataaatatataa
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