Mus caroli (Ryukyu mouse): 110309082
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Entry
110309082 CDS
T05910
Symbol
Ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X2
KO
K16474
intraflagellar transport protein 88
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcal03037
]
110309082 (Ift88)
Cilium and associated proteins [BR:
mcal03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
110309082 (Ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_7
TPR_8
TPR_19
TPR_16
TPR_14
TPR_6
TPR_11
ANAPC3
TPR_10
TPR_17
TPR_CcmH_CycH
ARM_TT21_4th
TPR_9
ARM_TT21_5th
TPR-S
TPR_21
ARM_TT21_N
RPN7
TPR_15
DUF6584
ARM_TT21_C
HEAT_Nup120
HAT_PRP39_C
Coatomer_E
ARM_TT21_2nd
Motif
Other DBs
NCBI-GeneID:
110309082
NCBI-ProteinID:
XP_021037143
Ensembl:
MGP_CAROLIEiJ_G0019349
UniProt:
A0A6P5QYU7
LinkDB
All DBs
Position
14:48673053..48764805
Genome browser
AA seq
825 aa
AA seq
DB search
MMENVHLAPETDEDDLYSGFNDYNPAFDTEELENDTGFQQAVRTSHGRRPPVTAKIPSTA
VSRPIATGYGSKTSLTSSMGRPMTGTIQDGVARPMTAVRAAGFSKAALRGSAFDPLGQSR
GPAPPLEAKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVR
QREQITSPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNAGRLKVNMG
NIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGITFIKTGQYSDAINSFEHIMS
MAPSLKAGFNLILSCFAIGDREKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNLLIEAI
KNDHLRQMERERKAMAEKYIMTAAKLIAPVIEASFAVGYNWCVEVVKASQYVELANDLEI
NKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNS
DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALD
SFLKLHAILRNSAQVLCQIANVYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELYDSE
GDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLM
VASCFRRSGNYQKALATYKEIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRLEKM
KEMREQRIKSGRDSSGGSRSKREGSAGSDSGQNNSASSKSERLSAKLRALPGTDEPYESS
GNKEIDASYVDPLGPQIERPKTAAKKRIDEDDFADEELGDDLLPE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaatgttcatctggcaccagaaacagatgaggacgacctttactctggtttc
aacgactacaacccagcctttgatactgaggagttggagaatgacacgggttttcagcaa
gcagtgagaaccagtcatggcagaagacctccagtaactgctaaaataccaagcacagca
gtcagcagacccatagctactggatatgggtccaagacatccctgacatcatcaatggga
agaccgatgacagggacgattcaggatggagttgctcgaccgatgacagcagtgagagca
gctggcttttccaaggcagctttgcgaggctctgcatttgacccccttggtcagtccagg
ggccctgctcctcctttggaagccaaaaatgaagacagtccagaagaaaaaattagacag
ttggagaagaaagtaaatgagttggtggaagaaagctgtattgccaacagttgtggagac
ttaaaactggccttagagaaggcaaaagatgcaggaagaaaagagagagtcctggtgaga
caacgagagcaaatcacaagtccagaaaatatcaacttggacttaacctactccgttctt
ttcaacttggccagtcagtattctgctaatgaaatgtatgcagaagcactaaacacatac
caagttatagtgaaaaataagatgtttagcaatgcaggaagactgaaagtgaatatggga
aatatttatttaaagcagagaaattattccaaagccattaagttctaccgaatggcctta
gatcagatcccaagtgtccataaagaaatgaggattaaaataatgcagaacattggaatc
acatttataaaaactggtcagtactcagatgccatcaactcatttgagcacattatgagc
atggccccgagcctgaaggcaggcttcaaccttattcttagttgttttgccattggagat
cgggagaaaatgaagaaggcattccaaaaattaattgctgttccgttagaaattgatgaa
gatgataaatatatctccccaagtgatgatccccatactaacttactgattgaagctata
aaaaatgaccaccttaggcaaatggaacgtgaaaggaaagccatggcagaaaaatacatc
atgacagctgcaaaactcattgctcctgtgatcgaagcatcttttgctgtgggttataat
tggtgtgtggaagtagtgaaagcctctcagtatgtggagctggccaacgacctggagatt
aacaaagcaattacttacttgagacaaaaggactttaaccaagctgtagacacattgaaa
atgtttgagaagaaggacagtagagtgaagagtgcagctgcgaccaacctctcattcctg
tattatctggaaaacgaatttgcccaagccagcagctatgcagatttagctgtgaactcg
gatagatataacccgtcagctctcactaataaagggaacacagtctttgcaaatggtgat
tatgagaaggcagctgagttctataaagaggccctgagaaacgactcttcctgtactgaa
gcactttataacattggcctcacctataagaagttaaaccgtctggatgaagccttggac
tccttcctgaaactgcacgcaatccttcggaacagcgctcaagttctttgccagatagca
aacgtatatgagttaatggaagatcccaatcaagctattgaatggctgatgcagttgatc
agcgttgttccaactgactcccaagctctgtctaaactgggagagttatacgatagtgag
ggagacaagtcccaggcattccaatattactatgagtcatacaggtatttcccttctaac
attgaagtcattgaatggcttggagcttattacattgatacccagttctgcgagaaagcc
attcagtactttgaaagagcttcccttatacaacccacacaagtgaaatggcagctgatg
gtagctagctgctttagaagaagtggtaactaccaaaaggcattagctacttataaagag
attcacaggaaatttccggagaatgttgaatgtttgcgtttcttggttcgtctctgcaca
gatattggattaaaagaagttcaagaatatgccacaaaactcaagaggttggaaaaaatg
aaagaaatgagggaacagcgcataaaatcgggcagagacagcagcgggggttctcgcagc
aaacgagaggggagcgcgggcagtgacagtggccagaacaatagtgccagtagtaagagt
gaacgactgagtgccaagctcagagctttgcctgggacagatgaaccttatgaaagtagc
ggtaacaaagaaatagatgcctcctacgtggatccactgggccctcagatagaaagacca
aaaactgcagccaagaaaagaattgacgaggatgattttgctgatgaagagttaggagat
gacttgctcccagaataa
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integrated database retrieval system
