Mus caroli (Ryukyu mouse): 110309270
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Entry
110309270 CDS
T05910
Symbol
Nr1d2
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
110309270 (Nr1d2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110309270 (Nr1d2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mcal03310
]
110309270 (Nr1d2)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
110309270 (Nr1d2)
Nuclear receptors [BR:
mcal03310
]
1. Thyroid hormone like
1D. Rev-Erb
110309270 (Nr1d2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
LpxD
Motif
Other DBs
NCBI-GeneID:
110309270
NCBI-ProteinID:
XP_021037486
Ensembl:
MGP_CAROLIEiJ_G0018972
UniProt:
A0A6P5QZL7
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Position
14:complement(11014422..11042871)
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AA seq
575 aa
AA seq
DB search
MELNAGGVIAYISSSSSASSPASCHSEGSENSFQSSSSSVPSSPNSSNCDANGNPKNTDI
SSIDGVLKSDRTDCPVKTGKPSTPGMTKSHSGMTKFSGMVLLCKVCGDVASGFHYGVHAC
EGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVRFGRIP
KREKQRMLIEMQSAMKTMMNTQFSGHLQNDTLAEQHEQSALPAQEQLRPKSQLEQENIKN
TPDFAKEEVIGMVTRAHKDTFLYNQEHGENSSESMPPQRGERIPRNMEQYNLNQDHRGSG
LHKHFPCSERLPHLSGQYKGRNIMHYPNGHAVCIANGHCMNFSSAYTQRVCDRIPVGGCS
QTENRNSYLCNTGGRMHLVCPMSKSPYVDPQKSGHEIWEEFSMSFTPAVKEVVEFAKRIP
GFRDLSQHDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLS
SMFEFSEKLNALQLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLIMKNH
PNEASIFTKLLLKLPDLRSLNNMHSEELLAFKVHP
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaacgcaggaggtgtgattgcctacatcagttcctctagctctgcctccagc
cccgcctcttgtcacagtgagggttctgagaatagtttccagtcttcgtcctcgtctgtt
ccatcttctccaaatagctctaactgtgatgccaacggcaatcccaagaacactgatatc
tctagcatcgatggtgttctgaagagtgaccgcacagattgtcctgtgaagacaggcaaa
cccagtactcctggcatgactaagagtcacagtggaatgacaaaatttagtggcatggtt
ctactgtgtaaagtctgtggggatgtggcatcaggattccactatggagttcatgcttgt
gaaggctgtaagggtttctttcggaggagcattcagcaaaacatccagtataagaagtgc
ctgaagaatgagaactgttccatcatgaggatgaacagaaaccggtgccagcagtgccgc
tttaagaagtgtctatctgtgggaatgtcacgagatgctgttcgatttggccggattcct
aagcgtgaaaaacagagaatgctaattgaaatgcaaagtgcaatgaagaccatgatgaac
acccagttcagtggccacctgcagaatgacaccttagcagaacagcatgaacagtcagca
ctaccagctcaggaacagctgcggcccaagtcccagctggagcaagaaaacatcaaaaac
actcctgattttgcaaaggaggaagtgattggcatggtgaccagagcccacaaggacacc
tttctgtataatcaggaacatggagaaaactcatctgagagcatgccacctcagagagga
gaacggattcccaggaacatggagcagtataatttaaatcaagaccatcgtggcagtggg
cttcacaagcacttcccctgtagtgagaggctgccacatctcagtggacagtacaaaggg
aggaacataatgcattacccaaacggccatgctgtttgtattgcaaatggacactgtatg
aacttctccagtgcttatactcaaagagtctgtgatagaattccagtaggtggatgttct
cagactgagaacaggaatagttacctgtgcaacactggagggaggatgcatctggtgtgt
cctatgagtaagtctccatatgtggaccctcagaagtctggacatgaaatctgggaagaa
ttttcaatgagttttaccccagcagtaaaagaggtggtggaatttgcaaagaggattcct
ggcttccgagatctgtctcagcacgatcaggtcaatctgttaaaagctgggacttttgag
gttttaatggtacgatttgcttcattatttgatgcaaaggaacggactgtcacctttcta
agtggtaagaagtacagtgtggatgatctgcactcaatgggagcaggggatctgctcagc
tctatgtttgagttcagtgagaagctgaatgccctccagctcagtgatgaggaaatgagc
ttgttcacagcagttgttctggtatctgcagatcgatctggaattgaaaatgtcaactca
gtggaggctttgcaggaaacactcatccgtgcactaaggaccttaataatgaaaaaccat
ccaaatgaggcctccatttttacaaaattacttctaaagttgccagatcttcgatcttta
aacaacatgcactctgaggaactcttggcctttaaagttcatccttaa
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