Mus caroli (Ryukyu mouse): 110309328
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Entry
110309328 CDS
T05910
Symbol
Apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110309328 (Apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110309328 (Apex1)
Enzymes [BR:
mcal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
110309328 (Apex1)
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
110309328 (Apex1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
110309328
NCBI-ProteinID:
XP_021037578
Ensembl:
MGP_CAROLIEiJ_G0019209
UniProt:
A0A6P5R5V9
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All DBs
Position
14:42871518..42873725
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AA seq
317 aa
AA seq
DB search
MPKRGKKAAAEDGEEPKSEPETKKSKGAAKKTEKEAAGEGPVLYEDPPDQKTSPSGKSAT
LKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLTHQYWSA
PSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFESFVLVTAYVPNAGRGLVR
LEYRQRWDGAFRKFLKDLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFG
ELLQAVPLADSFRHLYPDTAXAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIR
SKALGSDHCPITLYLAR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcggggaaagaaagcggcggccgaggacggggaagaacccaagtcggagcca
gagaccaagaagagtaagggggcagcaaagaaaaccgagaaggaggccgcgggagagggc
cctgtcctgtatgaggaccccccagatcagaaaacctcacccagtggcaaatctgccaca
ctcaagatatgctcctggaatgtggatgggcttcgagcctggattaaaaagaaaggtttg
gattgggtaaaggaagaagcaccagatatcttgtgcctccaagagaccaaatgctcggag
aacaaactcccggctgaactgcaagagctgcctggactcacccatcagtactggtcagct
ccgtcagacaaagaaggatacagtggtgtgggcctactttcccgccagtgcccactaaaa
gtctcttatggcattggcgaggaagaacatgatcaagaaggccgggtgattgtggctgaa
tttgagtcctttgtcttggtaacagcctatgttcccaatgcaggcaggggtctggtaaga
ctggaataccgacagcgttgggatggagccttccgaaagtttctaaaggacttggcttcc
agaaagcctcttgtgctatgtggggatctcaatgtggctcatgaagaaattgaccttcgt
aaccccaaaggaaacaaaaagaatgctggctttactccccaggagcgccaaggttttggg
gaattgctacaggctgtaccattggctgacagcttccggcatctctaccccgacactgct
tangcttacactttctggacttacatgatgaatgcccgctctaagaatgttggttggcgc
cttgattactttttgctttcccactctcttttacctgcattgtgtgacagcaagatccgg
tccaaggctcttggcagtgaccactgtcccatcaccctttacctagcgcggtag
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integrated database retrieval system
