Mus caroli (Ryukyu mouse): 110309409
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Entry
110309409 CDS
T05910
Symbol
Psmc6
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03050
Proteasome
mcal05010
Alzheimer disease
mcal05012
Parkinson disease
mcal05014
Amyotrophic lateral sclerosis
mcal05016
Huntington disease
mcal05017
Spinocerebellar ataxia
mcal05020
Prion disease
mcal05022
Pathways of neurodegeneration - multiple diseases
mcal05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
110309409 (Psmc6)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
110309409 (Psmc6)
09164 Neurodegenerative disease
05010 Alzheimer disease
110309409 (Psmc6)
05012 Parkinson disease
110309409 (Psmc6)
05014 Amyotrophic lateral sclerosis
110309409 (Psmc6)
05016 Huntington disease
110309409 (Psmc6)
05017 Spinocerebellar ataxia
110309409 (Psmc6)
05020 Prion disease
110309409 (Psmc6)
05022 Pathways of neurodegeneration - multiple diseases
110309409 (Psmc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mcal03051
]
110309409 (Psmc6)
Proteasome [BR:
mcal03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
110309409 (Psmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_2
AAA_22
AAA_5
RuvB_N
PRS7_OB
nSTAND3
Prot_ATP_ID_OB_N
AAA_14
DUF815
AAA_7
AAA_11
TIP49
AAA_33
RNA_helicase
TPR_MLP1_2
AAA_3
NPHP3_N
Csa3_N
AAA_18
Mg_chelatase
bpMoxR
DUF3829_2nd
AAA_28
DUF5906
AAA_lid_PRS2_C
TsaE
AAA_24
NACHT
ATPase
AAA_25
Occludin_ELL
AAA_17
ATPase_2
Parvo_NS1
IstB_IS21
DUF4140
Med4
Motif
Other DBs
NCBI-GeneID:
110309409
NCBI-ProteinID:
XP_021037701
Ensembl:
MGP_CAROLIEiJ_G0019150
UniProt:
A0A6P5R021
LinkDB
All DBs
Position
14:37223463..37244112
Genome browser
AA seq
403 aa
AA seq
DB search
MALPGIPYERRLLIMADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND
LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLT
IMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP
PKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQ
PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLD
PALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNV
CTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKPV
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcccttcccggcatcccctatgagcgacggcttctcatcatggcggaccctagagat
aaggcgcttcaggactatcgcaagaagctgctagagcacaaggagattgacggccgtctt
aaggagctaagggaacaattaaaagaacttaccaagcagtatgagaagtctgaaaatgat
ttgaaggcactacaaagtgttgggcagattgtaggtgaagtgctaaaacagttaacagaa
gaaaaattcattgttaaagcaacaaatggaccaagatacgtcgtaggttgtcgtcgtcag
cttgacaaaagtaagctgaagccaggaaccagagtagctttggatatgaccacactaacc
atcatgagatatctgccgagagaggtggatccattggtttataacatgtctcacgaggat
cctggaaatgtatcttattctgaaattggaggcctttcagaacagattcgggagttaaga
gaggtaatagaattgcctcttacaaatccagaattattccagcgtgtaggaataatacct
ccaaaaggctgtttgctctatggaccgccaggcactgggaaaacactcttggcacgagct
gttgccagccagctggactgcaacttcctaaaggttgtatctagttctattgtagacaag
tacattggtgaaagtgctcgtttgattagagaaatgtttaattatgccagggaccaccag
ccatgcatcatttttatggatgaaatagatgctattggtggccgtcggttttctgaggga
acatcagctgacagagagattcagagaactttaatggagttactaaatcaaatggatgga
tttgatactctgcatagagttaaaatgatcatggctacaaacagaccagatacactggat
cctgctttgctgcgcccaggaagattagatagaaaaatacatatcgatttaccaaatgaa
caagcaagattagatatattgaaaatccacgcgggccctattacaaagcatggtgaaata
gattatgaagcaattgtaaagctttcagatggctttaatggagcagacctgagaaatgtt
tgtactgaagcaggtatgtttgcaattcgtgccgatcatgattttgtagttcaggaagac
ttcatgaaagcagtcaggaaagtggctgactccaagaagctggagtccaagctggactac
aagcctgtgtga
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integrated database retrieval system
