Mus caroli (Ryukyu mouse): 110309493
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Entry
110309493 CDS
T05910
Symbol
Dcp1a
Name
(RefSeq) mRNA-decapping enzyme 1A isoform X1
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110309493 (Dcp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110309493 (Dcp1a)
03036 Chromosome and associated proteins [BR:
mcal03036
]
110309493 (Dcp1a)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110309493 (Dcp1a)
mRNA degradation factors
5'-3' decay
Decapping complex
110309493 (Dcp1a)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Gene silencing
piRNA pathway
110309493 (Dcp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
110309493
NCBI-ProteinID:
XP_021037855
Ensembl:
MGP_CAROLIEiJ_G0019050
UniProt:
A0A6P5R0E1
LinkDB
All DBs
Position
14:22793075..22839162
Genome browser
AA seq
602 aa
AA seq
DB search
MALSCSTVRPRRRGSALRSKMELLSRAEQEMSLAALKQHDPYITSIADLTGQVALYTFCP
KANQWEKTDIEGTLFVYRRSASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNA
SLSIYSIWFYDKNDCHRIAKLMADVVEEETRRSQQAARDKQSPSQANGCSDQRPIDILEM
LSRAKDEYERNQMGGSNISSPGLQPSTQLSNLGSTETLEETPSGSQDKSAPAGHKHLTVE
ELFGTSLPKEQPTAMGLESEDTDKLLGDASQKEPSSFLPFPFEQSGGAPQSENLGIHSTA
HHTVQPEVSTPVLITPASIAQSGDKHPPSYTLPLSPVLSPTLPAEASTTQVPHLPRNSTM
MQAVKTTPRQKSPLLNQPVPELSHSSLIASQSPFRAPVSLANPAGTALPSVDLLQKLRLT
PQHDQIQAQPLGKGTMAPSFSSAAGQLATPESFIEPASKTAAARAAVSASLSNMVLAPTL
QSMQQNQDPEVFSQPKVLPSAIPIAGSPLVPATTTAVSSVLLSPSVFQQTVPRAADLERK
ASSPSPLTVGTPENQRKPSIILSKSQLQDTLIHLIKNDSSFLSTLHAVYLQVLTKNKDNH
NL
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcactttcctgttctacagtccgcccccgccggaggggctcggctctgagatccaag
atggagttgttgagtcgagctgagcaagagatgagtctggcggccttgaaacaacacgac
ccctatatcaccagcatcgcagacctcacgggccaggtcgccctgtacactttctgcccc
aaagccaaccagtgggagaagactgatatagaagggacgttatttgtataccgaaggtca
gcttcgccttaccatggctttaccattgtcaaccgactgaacatgcacaatctggttgag
ccagtgaataaagatttggaatttcagctccatgaaccatttcttctgtatagaaatgca
agtttgtcaatatacagtatctggttttatgacaagaatgactgtcatcgcatagcaaaa
ctcatggctgatgtggtagaagaggagacacggcgatcccagcaggctgctcgagataaa
cagagtcccagccaggccaatggctgcagcgaccagaggcccatagatatcctggagatg
ctgagcagggccaaggatgagtatgagaggaatcagatgggcggctcaaatatctccagt
cctgggctacagccaagcactcagctctctaatctgggaagcacggagactctagaagag
acaccctctgggtcacaggataagtctgctccggctggtcataaacatctgacagtagaa
gagttatttggaacctccttgccaaaggaacaaccaacagctatgggtctagagtcagag
gacacagacaagctgctgggagatgcatcacagaaagagcccagctcattcctcccattt
ccctttgagcagtcagggggagcccctcagtctgaaaacctgggtatccattctaccgct
caccacacagttcagcctgaagtcagcaccccggtgctgatcactcccgcctccattgca
cagtcgggtgacaaacatcccccaagctacacactcccactgagccctgtcctcagcccc
actctgccagctgaagcttctaccacacaagttccccacttacctcggaatagcaccatg
atgcaagcagtaaagaccacacccaggcagaaatctccactcctgaaccagccagtccct
gagctaagccacagtagtctgattgctagccagagccccttcagagccccagtgagccta
gcaaacccagccggcacagccctcccaagcgttgatctgctccagaaactcaggttgacc
ccacagcatgaccaaatacaagcacagccgcttggaaaaggaaccatggcacccagcttt
tcttcggcagctggccaactggccacccctgagagcttcatagagcctgcttctaagaca
gcagcagcaagagcagcagtctcagcctccctgagcaacatggtgcttgctccaaccctc
cagtctatgcagcaaaaccaggatcctgaagtattttcccagcctaaggtgttacccagt
gccatcccgattgcaggctctccattggttcctgcaaccaccacagcagtatcttcagtc
ctgctgtcccccagtgtgttccagcaaacagttcccagggcggcagacctagagaggaaa
gccagctccccgtctcccctcactgttgggacaccagagaatcagagaaagccttccatt
atcctcagcaagtctcagctccaggacacactgatacacctaataaagaatgactccagc
ttcctcagtacgcttcatgcagtttacttgcaggttctgaccaagaacaaagacaaccac
aacctatga
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