KEGG   Mus caroli (Ryukyu mouse): 110309563
Entry
110309563         CDS       T05910                                 
Symbol
Nefm
Name
(RefSeq) neurofilament medium polypeptide
  KO
K04573  neurofilament medium polypeptide (neurofilament 3)
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal05014  Amyotrophic lateral sclerosis
mcal05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    110309563 (Nefm)
   05022 Pathways of neurodegeneration - multiple diseases
    110309563 (Nefm)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mcal04812]
    110309563 (Nefm)
Cytoskeleton proteins [BR:mcal04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type IV
     110309563 (Nefm)
SSDB
Motif
Pfam: Filament Filament_head ATG14 DUF1664
Other DBs
NCBI-GeneID: 110309563
NCBI-ProteinID: XP_021037956
Ensembl: MGP_CAROLIEiJ_G0019452
UniProt: A0A6P5R194
LinkDB
Position
14:complement(59268879..59274263)
AA seq 848 aa
MSYTLDSLGNPSAYRRVTETRSSFSRVSGSPSSGFRSQSWSRGSPSTVSSSYKRSALAPR
LAYSSAMLSSAESSLDFSQSSSLLNGGSGGDYKLSRSNEKEQLQGLNDRFAGYIEKVHYL
EQQNKEIEAEIQALRQKQASHAQLGDAYDQEIRELRATLEMVNHEKAQVQLDSDHLEEDI
HRLKERFEEEARLRDDTEAAIRALRKDIEESSMVKVELDKKVQSLQDEVAFLRSNHEEEV
ADLLAQIQASHITVERKDYLKTDISTALKEIRSQLECHSDQNMHQAEEWFKCRYAKLTEA
AEQNKEAIRSAKEEIAEYRRQLQSKSIELESVRGTKESLERQLSDIEERHNHDLSSYQDT
IQQLENELRGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSTFSGSITGP
LYTHRQPSVTISSKIQKTKVEAPKLKVQHKFVEEIIEETKVEDEKSEMEETLTAIAEELA
ASAKEEKEEAEEKEEEPEAEKSPVKSPEAKEEEEEGEKEEEEEGQEEEEEEDEGVKSDQA
EEGGSEKEGSSEKDEGEQEEEEGETEAEGEGEEVEAKEEKKIEGKVEEVAVKEEIKVEKP
EKAKSPMPKSPVEEVKPKPEAKAGKGEQKEEEKVEEEKKEVTKESPKEEKVEKKEEKPKD
VADKKKAESPVKEKAVEEVVTISKSVKVSLEKDTKEEKPQPQEKVKDKAEEEGGSEEEGS
DRSPQESKKEDIAINGEVEGKEEEEQETQEKGSGREEEKGVVTNGLDVSPAEEKKGEDSS
DDKVVVTKKVEKITSEGGDGATKYITKSVTVTQKVEEHEETFEEKLVSTKKVEKVTSHAI
VKEVTQGD
NT seq 2547 nt   +upstreamnt  +downstreamnt
atgagctacacgctggactcgctgggcaacccgtccgcctaccggcgggtcaccgagacc
cgctccagcttcagccgcgtgagcggttccccgtccagcggcttccgctcgcagtcctgg
tcccgcggctcgcccagcaccgtgtcctcctcctacaagcgcagcgcgctcgccccgcgt
ctcgcctacagctcggctatgctcagctcggccgagagcagcctcgacttcagccagtcc
tcgtcgctgctcaacggcggctccggcggcgactacaaactgtcccgctctaacgagaaa
gagcagctgcaggggctgaacgaccgcttcgccggctacatcgagaaagtgcactacttg
gaacaacagaacaaggagatcgaggcagagatccaggcactgcggcagaagcaggcctcg
cacgcccagctgggtgatgcttacgaccaggagatccgagagctgcgcgccaccctcgag
atggtgaaccacgagaaggctcaagtgcagctggactccgatcacttggaggaagacatc
caccggctcaaggagcgcttcgaggaggaggcgcggctgcgggacgacaccgaggctgcc
attcgcgcgctgcgcaaagacatcgaggagtcgtcgatggttaaggtggagctggacaag
aaggtgcagtcgctgcaggatgaggtggctttcctgcggagcaatcacgaagaggaggtg
gccgacctgctggctcagatccaggcgtcgcacatcacagtagagcgcaaagattacctg
aagaccgacatctctacggcgctgaaggagatccgctcccagctcgagtgtcactcagac
cagaatatgcaccaggccgaagagtggttcaaatgccgctacgccaagctcaccgaggcg
gccgagcagaacaaggaggccattcgctccgccaaggaagagatcgccgagtaccggcgc
cagctgcagtccaagagcatcgagctcgagtcggtgcgaggcactaaggagtccctggag
cggcagctcagcgacatcgaggagcgccacaaccacgacctcagcagctaccaggacacc
atccagcagttggaaaatgaacttcggggaaccaagtgggaaatggctcgtcatttgcga
gaataccaggatctccttaacgtcaagatggccctggacatcgagatcgccgcgtacagg
aaactcctagagggggaagagaccagatttagcacattttcaggaagcatcaccgggcct
ctgtacacacaccgacagccctcagtcacaatatccagtaagattcagaagaccaaagtc
gaggcccccaagctcaaggtccaacacaaatttgtggaggagatcatcgaagaaactaaa
gtggaagatgagaagtcagaaatggaagaaaccctcacagccatcgcagaggagttggca
gcctccgccaaagaggagaaggaagaggcagaagaaaaggaggaggaaccagaagccgaa
aagtctcccgtgaagtctcctgaggctaaggaagaggaggaggaaggggaaaaggaggaa
gaagaggaaggccaggaggaagaagaggaggaagatgaaggtgtcaagtcagaccaggca
gaagaggggggatctgagaaggaaggctccagtgaaaaagatgaaggtgagcaggaagaa
gaagaaggagaaaccgaggcagaaggtgaaggagaggaagtagaagctaaggaggaaaag
aaaattgagggaaaggttgaggaagtggctgtcaaggaggaaatcaaggtcgagaagcct
gagaaagccaaatcccctatgcccaaatcacccgtggaagaagtaaagccaaaaccagag
gccaaggccgggaagggtgagcaaaaggaggaagagaaagttgaggaagagaagaaggaa
gtcaccaaagaatcacccaaggaagagaaggtggagaaaaaggaggagaagccaaaagat
gttgcagataaaaagaaggccgagtccccggtgaaagagaaggctgtggaggaggtggtc
accatcagcaagtcggtaaaggtgagcctggagaaagacaccaaagaggagaagcctcag
ccgcaggagaaggtgaaggacaaggcagaggaggaggggggcagtgaggaggaagggagt
gaccgaagcccgcaggagtccaagaaggaagacatagctatcaatggggaggtggaaggg
aaggaggaggaggagcaggaaactcaggagaagggcagtgggcgggaggaggagaaaggg
gtggtcactaatggcttagatgtgagccctgcagaggagaagaaaggagaggatagcagt
gatgataaagtggtggtcaccaagaaggtagaaaagatcaccagcgaggggggcgatggt
gctaccaaatacatcaccaaatctgtaaccgtcactcaaaaggttgaagagcatgaggag
acctttgaggagaagctggtctcaactaaaaaggtagaaaaggtcacttcacacgccata
gtcaaggaagtcacccagggtgactaa

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