Mus caroli (Ryukyu mouse): 110309563
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Entry
110309563 CDS
T05910
Symbol
Nefm
Name
(RefSeq) neurofilament medium polypeptide
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal05014
Amyotrophic lateral sclerosis
mcal05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110309563 (Nefm)
05022 Pathways of neurodegeneration - multiple diseases
110309563 (Nefm)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcal04812
]
110309563 (Nefm)
Cytoskeleton proteins [BR:
mcal04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
110309563 (Nefm)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
ATG14
DUF1664
Motif
Other DBs
NCBI-GeneID:
110309563
NCBI-ProteinID:
XP_021037956
Ensembl:
MGP_CAROLIEiJ_G0019452
UniProt:
A0A6P5R194
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Position
14:complement(59268879..59274263)
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AA seq
848 aa
AA seq
DB search
MSYTLDSLGNPSAYRRVTETRSSFSRVSGSPSSGFRSQSWSRGSPSTVSSSYKRSALAPR
LAYSSAMLSSAESSLDFSQSSSLLNGGSGGDYKLSRSNEKEQLQGLNDRFAGYIEKVHYL
EQQNKEIEAEIQALRQKQASHAQLGDAYDQEIRELRATLEMVNHEKAQVQLDSDHLEEDI
HRLKERFEEEARLRDDTEAAIRALRKDIEESSMVKVELDKKVQSLQDEVAFLRSNHEEEV
ADLLAQIQASHITVERKDYLKTDISTALKEIRSQLECHSDQNMHQAEEWFKCRYAKLTEA
AEQNKEAIRSAKEEIAEYRRQLQSKSIELESVRGTKESLERQLSDIEERHNHDLSSYQDT
IQQLENELRGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSTFSGSITGP
LYTHRQPSVTISSKIQKTKVEAPKLKVQHKFVEEIIEETKVEDEKSEMEETLTAIAEELA
ASAKEEKEEAEEKEEEPEAEKSPVKSPEAKEEEEEGEKEEEEEGQEEEEEEDEGVKSDQA
EEGGSEKEGSSEKDEGEQEEEEGETEAEGEGEEVEAKEEKKIEGKVEEVAVKEEIKVEKP
EKAKSPMPKSPVEEVKPKPEAKAGKGEQKEEEKVEEEKKEVTKESPKEEKVEKKEEKPKD
VADKKKAESPVKEKAVEEVVTISKSVKVSLEKDTKEEKPQPQEKVKDKAEEEGGSEEEGS
DRSPQESKKEDIAINGEVEGKEEEEQETQEKGSGREEEKGVVTNGLDVSPAEEKKGEDSS
DDKVVVTKKVEKITSEGGDGATKYITKSVTVTQKVEEHEETFEEKLVSTKKVEKVTSHAI
VKEVTQGD
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgagctacacgctggactcgctgggcaacccgtccgcctaccggcgggtcaccgagacc
cgctccagcttcagccgcgtgagcggttccccgtccagcggcttccgctcgcagtcctgg
tcccgcggctcgcccagcaccgtgtcctcctcctacaagcgcagcgcgctcgccccgcgt
ctcgcctacagctcggctatgctcagctcggccgagagcagcctcgacttcagccagtcc
tcgtcgctgctcaacggcggctccggcggcgactacaaactgtcccgctctaacgagaaa
gagcagctgcaggggctgaacgaccgcttcgccggctacatcgagaaagtgcactacttg
gaacaacagaacaaggagatcgaggcagagatccaggcactgcggcagaagcaggcctcg
cacgcccagctgggtgatgcttacgaccaggagatccgagagctgcgcgccaccctcgag
atggtgaaccacgagaaggctcaagtgcagctggactccgatcacttggaggaagacatc
caccggctcaaggagcgcttcgaggaggaggcgcggctgcgggacgacaccgaggctgcc
attcgcgcgctgcgcaaagacatcgaggagtcgtcgatggttaaggtggagctggacaag
aaggtgcagtcgctgcaggatgaggtggctttcctgcggagcaatcacgaagaggaggtg
gccgacctgctggctcagatccaggcgtcgcacatcacagtagagcgcaaagattacctg
aagaccgacatctctacggcgctgaaggagatccgctcccagctcgagtgtcactcagac
cagaatatgcaccaggccgaagagtggttcaaatgccgctacgccaagctcaccgaggcg
gccgagcagaacaaggaggccattcgctccgccaaggaagagatcgccgagtaccggcgc
cagctgcagtccaagagcatcgagctcgagtcggtgcgaggcactaaggagtccctggag
cggcagctcagcgacatcgaggagcgccacaaccacgacctcagcagctaccaggacacc
atccagcagttggaaaatgaacttcggggaaccaagtgggaaatggctcgtcatttgcga
gaataccaggatctccttaacgtcaagatggccctggacatcgagatcgccgcgtacagg
aaactcctagagggggaagagaccagatttagcacattttcaggaagcatcaccgggcct
ctgtacacacaccgacagccctcagtcacaatatccagtaagattcagaagaccaaagtc
gaggcccccaagctcaaggtccaacacaaatttgtggaggagatcatcgaagaaactaaa
gtggaagatgagaagtcagaaatggaagaaaccctcacagccatcgcagaggagttggca
gcctccgccaaagaggagaaggaagaggcagaagaaaaggaggaggaaccagaagccgaa
aagtctcccgtgaagtctcctgaggctaaggaagaggaggaggaaggggaaaaggaggaa
gaagaggaaggccaggaggaagaagaggaggaagatgaaggtgtcaagtcagaccaggca
gaagaggggggatctgagaaggaaggctccagtgaaaaagatgaaggtgagcaggaagaa
gaagaaggagaaaccgaggcagaaggtgaaggagaggaagtagaagctaaggaggaaaag
aaaattgagggaaaggttgaggaagtggctgtcaaggaggaaatcaaggtcgagaagcct
gagaaagccaaatcccctatgcccaaatcacccgtggaagaagtaaagccaaaaccagag
gccaaggccgggaagggtgagcaaaaggaggaagagaaagttgaggaagagaagaaggaa
gtcaccaaagaatcacccaaggaagagaaggtggagaaaaaggaggagaagccaaaagat
gttgcagataaaaagaaggccgagtccccggtgaaagagaaggctgtggaggaggtggtc
accatcagcaagtcggtaaaggtgagcctggagaaagacaccaaagaggagaagcctcag
ccgcaggagaaggtgaaggacaaggcagaggaggaggggggcagtgaggaggaagggagt
gaccgaagcccgcaggagtccaagaaggaagacatagctatcaatggggaggtggaaggg
aaggaggaggaggagcaggaaactcaggagaagggcagtgggcgggaggaggagaaaggg
gtggtcactaatggcttagatgtgagccctgcagaggagaagaaaggagaggatagcagt
gatgataaagtggtggtcaccaagaaggtagaaaagatcaccagcgaggggggcgatggt
gctaccaaatacatcaccaaatctgtaaccgtcactcaaaaggttgaagagcatgaggag
acctttgaggagaagctggtctcaactaaaaaggtagaaaaggtcacttcacacgccata
gtcaaggaagtcacccagggtgactaa
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