Mus caroli (Ryukyu mouse): 110309596
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Entry
110309596 CDS
T05910
Symbol
Sox21
Name
(RefSeq) transcription factor SOX-21 isoform X1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110309596 (Sox21)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110309596 (Sox21)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
110309596
NCBI-ProteinID:
XP_021038007
Ensembl:
MGP_CAROLIEiJ_G0019593
UniProt:
A0A6P5R6W7
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Position
14:complement(107457716..107461520)
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AA seq
276 aa
AA seq
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MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGSVADAEHPALKAGAGLHAG
AGGGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAAAAAGSPYSLLDLGSKMA
EISSSSSGLPYASSLGYPTAGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYMIPCNC
SAWPSPGLQPPLAYILLPGMGKPQLDPYPAAYAAAL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcctgtggaccacgtcaagcggcccatgaacgccttcatggtgtggtcgcgg
gctcagcggcggaagatggcccaggagaaccctaagatgcacaactcggagatcagcaag
cgcctgggcgccgagtggaagctgctcaccgagtccgagaagcggccgttcatcgacgag
gcgaagcgcctgcgagccatgcacatgaaggagcatcccgactacaagtaccggccgcgg
cgcaagcccaagacgctgctcaaaaaggacaagttcgccttcccggtgccctacggcctg
ggcagcgtggcggacgccgagcacccggcgctcaaggcgggagccgggctgcacgcgggc
gcgggcggcggcctggtccccgagtctctgctcgcgaaccccgagaaggcggccgccgcc
gctgccgccgccgccgcgcgcgtcttcttcccgcagtctgcggccgctgccgccgccgcc
gctgctgccgccgccgcgggcagcccctactcactgctcgacctgggctccaagatggca
gagatctcgtcgtcgtcgtccggcctgccgtacgcgtcgtcgctggggtaccccacggcg
ggtgcgggcgccttccacggggcggccgcggcggctgctgcggccgcggcggccgccggg
gggcacacgcactcgcaccccagtccgggcaaccccggctacatgatcccgtgcaactgc
agcgcgtggcccagcccggggctgcagccgccgctcgcctacatcctgctgccaggcatg
ggcaagcctcagctggacccctaccctgcggcctacgcggccgcgctatga
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