Mus caroli (Ryukyu mouse): 110309649
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Entry
110309649 CDS
T05910
Symbol
Tnfsf11
Name
(RefSeq) tumor necrosis factor ligand superfamily member 11 isoform X1
KO
K05473
tumor necrosis factor ligand superfamily member 11
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04060
Cytokine-cytokine receptor interaction
mcal04064
NF-kappa B signaling pathway
mcal04380
Osteoclast differentiation
mcal04917
Prolactin signaling pathway
mcal04928
Parathyroid hormone synthesis, secretion and action
mcal05207
Chemical carcinogenesis - receptor activation
mcal05224
Breast cancer
mcal05323
Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
110309649 (Tnfsf11)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110309649 (Tnfsf11)
09150 Organismal Systems
09152 Endocrine system
04917 Prolactin signaling pathway
110309649 (Tnfsf11)
04928 Parathyroid hormone synthesis, secretion and action
110309649 (Tnfsf11)
09158 Development and regeneration
04380 Osteoclast differentiation
110309649 (Tnfsf11)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
110309649 (Tnfsf11)
09162 Cancer: specific types
05224 Breast cancer
110309649 (Tnfsf11)
09163 Immune disease
05323 Rheumatoid arthritis
110309649 (Tnfsf11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
mcal04052
]
110309649 (Tnfsf11)
04090 CD molecules [BR:
mcal04090
]
110309649 (Tnfsf11)
Cytokines and neuropeptides [BR:
mcal04052
]
Cytokines
Tumor necrosis fators
110309649 (Tnfsf11)
CD molecules [BR:
mcal04090
]
Proteins
110309649 (Tnfsf11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNF
DUF6264
Motif
Other DBs
NCBI-GeneID:
110309649
NCBI-ProteinID:
XP_021038039
Ensembl:
MGP_CAROLIEiJ_G0019532
UniProt:
A0A6P5QU83
LinkDB
All DBs
Position
14:complement(69129876..69160841)
Genome browser
AA seq
316 aa
AA seq
DB search
MRRASRDYGKYLRSSEEMGSGPGVPHEGPLHPAPSAPAPAPPPAASRSMFLALLGLGLGQ
VVCSIALFLYFRAQMYPNRISEDSTHCFYRILRLHENAGLQDSTPESEDTLPDSCRRMKQ
AFQGAVQKELQHIVGPQRFSGAPAMMEGSWLDVTQRGKPEAQPFAHLTINAASIPSGSHK
VTLSSWYHDRGWAKISNMTLSNGKLRVNQDGFYYLYANICFRHHETSGSVPTDYLQLMVY
VVKTSIKIPSSHNLMKGGSTKNWSGNSEFHFYSINVGGFFKLRAGEEISIQVSNPSLLDP
DQDATYFGAFKVQDID
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgggccagccgagactacggcaagtacctgcgcagctcggaggagatgggcagc
ggccccggcgtcccacacgagggtccgctgcaccccgcgccttcagcaccggctccggcg
ccaccacccgccgcctcccgctccatgttcctggccctcctggggctgggactgggccag
gtggtctgcagcatcgctctgttcctgtactttcgagcgcagatgtatcctaacagaata
tcagaagacagcactcactgcttttatagaatcctgagactccatgaaaacgcaggtttg
caggactcgactccggagagtgaagacacactacctgactcctgcaggaggatgaaacaa
gcctttcagggggctgtgcaaaaggaactgcaacacattgtggggccacagcgcttctca
ggagctccagctatgatggaaggctcatggttagatgtgacccagcgaggcaagcctgag
gcccagccatttgcacacctcaccatcaatgctgccagcatcccatcgggttcccataaa
gtcactctgtcctcttggtaccacgatcgaggctgggccaagatctctaacatgacgtta
agcaacggaaaactaagggttaaccaagatggcttctattacctgtacgccaacatttgc
tttcggcatcacgagacatcgggaagcgtacctacagactaccttcagctgatggtgtat
gtcgttaaaaccagcatcaaaatcccaagttctcataacctgatgaaaggagggagcaca
aaaaactggtcgggcaattctgaattccacttctattccataaatgttgggggatttttc
aagctccgagctggtgaagaaattagcattcaggtgtccaacccttccctgctggatccg
gatcaagatgcgacgtactttggggctttcaaagttcaggacatagactga
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