Mus caroli (Ryukyu mouse): 110309685 Help Entry 110309685         CDS       T05910                                  Symbol Vcl Name (RefSeq) vinculin isoform X2   KO K05700   vinculin Organism mcal  Mus caroli (Ryukyu mouse) Pathway mcal04510   Focal adhesion mcal04520   Adherens junction mcal04670   Leukocyte transendothelial migration mcal04810   Regulation of actin cytoskeleton mcal04820   Cytoskeleton in muscle cells mcal05100   Bacterial invasion of epithelial cells mcal05146   Amoebiasis Brite KEGG Orthology (KO) [BR:mcal00001]  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     110309685 (Vcl)    04520 Adherens junction     110309685 (Vcl)   09142 Cell motility    04820 Cytoskeleton in muscle cells     110309685 (Vcl)    04810 Regulation of actin cytoskeleton     110309685 (Vcl)  09150 Organismal Systems   09151 Immune system    04670 Leukocyte transendothelial migration     110309685 (Vcl)  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     110309685 (Vcl)   09174 Infectious disease: parasitic    05146 Amoebiasis     110309685 (Vcl)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:mcal04812]     110309685 (Vcl)    04147 Exosome [BR:mcal04147]     110309685 (Vcl) Cytoskeleton proteins [BR:mcal04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      110309685 (Vcl) Exosome [BR:mcal04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    110309685 (Vcl) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vinculin Talin_IBS2B VMAP-M0 Motif Other DBs NCBI-GeneID:  110309685 NCBI-ProteinID:  XP_021038083 Ensembl:  MGP_CAROLIEiJ_G0019002 UniProt:  A0A6P5QUC3 LinkDB All DBs Position 14:13702380..13798048 Genome browser AA seq 1066 aa AA seqDB search MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVEG IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ NT seq 3201 nt NT seq  +upstreamnt  +downstreamnt atgccggtgtttcacacgcgtacgatcgagagcatcctggagccggtggcgcagcagatc tcgcacctggtgattatgcacgaggagggcgaggtggacggcaaagccattcctgacctc accgcgcccgtggccgccgtgcaagcggccgtcagcaacctcgtccgggttggaaaagag actgttcagaccactgaggatcagattctgaagagagatatgccaccagcctttattaag gttgaaaatgcttgcaccaagcttgttcaggcagcccagatgcttcagtctgacccatac tcggttcctgcgcgggattacctcattgacggctctaggggaatcctttctggcacatct gacctactgcttacctttgatgaggctgaggttcgtaaaattattagggtttgcaaagga attttggaatatcttacagtggcagaggtagtggaaactatggaagacttggtcacttac acaaagaatcttgggccaggaatgactaagatggccaaaatgattgatgagagacagcag gagttgactcaccaggaacaccgtgtgatgttggtgaactcaatgaacaccgtcaaagag ctgcttcctgttctcatttcagctatgaagatttttgttacaaccaaaaactcaaaaaac caaggaatagaagaagctttgaaaaatcgaaattttactgtagaaaagatgagtgctgaa attaacgagatcattcgtgtgttacaactcacttcctgggatgaagacgcctgggccagc aaggacactgaagccatgaagagagcgctggcatccatagactccaaattgaaccaggcc aaaggttggctccgtgaccccaatgcctccccaggggatgccggagagcaggccatcagg cagatcttagatgaagctggaaaagttggtgaactttgtgcaggcaaggaacgcagggag atcctaggaacctgcaaaatgctagggcagatgactgaccaagtggctgaccttcgagcc agaggacaaggagcttccccagtggccatgcagaaggcccagcaagtgtctcaggggctc gacgtgcttactgcgaaagtggagaatgcagctcggaagctggaagccatgacgaactca aagcagagcattgcaaagaagattgatgctgcccagaattggctggcggatccaaatggt ggacctgagggagaagaacagattcgaggggctttggctgaagctcggaagattgcagaa ttatgtgatgatcctaaggagagagatgacatcctccggtcccttggagagatagctgct ctgacctctaaactaggagacttgcgaagacaggggaaaggagactcgccagaggctcga gccttggccaaacaagtggcgacggcactacagaacctgcagaccaaaaccaacagggcc gtggccaacagcagacctgccaaagcagctgtccacctcgagggcaagattgaacaggcg cagcggtggattgataatcctacagtagatgaccgtggagtcggtcaggctgccatccgt ggacttgtggctgaggggcatcggctggccaatgtcatgatgggaccttatcgccaagat cttcttgccaaatgtgaccgtgtagaccagctaacagctcagctggctgacctggctgcc cgaggggagggggagagtccgcaggcgagagcacttgcatcccagcttcaggactcctta aaggatcttaaagcccagatgcaggaagctatgactcaagaggtatccgatgttttcagc gatactacaactcctatcaagctgttggcagtggccgccactgctcctcctgatgcaccc aatagggaagaggtatttgatgaaagggcagccaattttgaaaaccattcaggaaggctt ggagccacagcagagaaggcagctgccgttggtacggccaataaatcgacagtggaaggc attcaggcgtctgtgaagacagcccgagaactcacgccccaggtcatctcagctgctcgg atcttactgaggaaccctggtaaccaggctgcttatgaacattttgagaccatgaagaac cagtggattgataatgttgaaaaaatgacagggctggtggacgaggctattgataccaag tctctgttggatgcttctgaagaagcaattaaaaaagacctggacaagtgtaaggtagcc atggccaatattcagcctcagatgctggtcgctggagcaaccagtattgctcgtcgggcc aaccggattctgctggttgctaagagggaggtagagaactctgaggacccgaagttccga gaggctgtgaaagctgcctctgatgaactgagcaaaacaatctcccccatggtgatggat gccaaggctgtggctggaaacatctctgaccctggcctgcaaaagagcttcctggactca ggatatcggatcctgggagctgtggccaaggtcagagaagccttccaacctcaggagcct gacttcccgcctcctccaccagaccttgaacagctacgactaactgatgagctggctcct cctaaaccacctctgcctgagggtgaagtccctccacccaggcccccacccccagaagag aaggatgaagagttccctgagcagaaagctggtgaggtgattaaccagccaatgatgatg gccgccaggcagctccacgatgaagctcggaaatggtctagcaagggcaatgacatcatt gcagcagccaagcgcatggctctgctgatggcagagatgtctcggctggtaagagggggc agtggtaccaagcgggcacttattcagtgtgccaaggatatcgccaaggcctctgatgag gtgacgaggttggccaaggaggttgccaagcagtgcacagataagcggattagaaccaat ctcttacaggtatgcgagcgaatcccaactataagcacccagctcaaaatcctgtccaca gtgaaggccactatgctgggccggaccaacatcagtgatgaggagtctgagcaggccaca gagatgctggttcataatgcccagaacctcatgcagtctgtgaaggagactgtgcgagag gctgaagctgcttcaatcaaaatccgaacagatgctggctttactctgcgctgggtcaga aagactccctggtaccagtag

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