Mus caroli (Ryukyu mouse): 110309817
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Entry
110309817 CDS
T05910
Symbol
Rp1l1
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcal03037
]
110309817 (Rp1l1)
04812 Cytoskeleton proteins [BR:
mcal04812
]
110309817 (Rp1l1)
Cilium and associated proteins [BR:
mcal03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
110309817 (Rp1l1)
Cytoskeleton proteins [BR:
mcal04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
110309817 (Rp1l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
110309817
NCBI-ProteinID:
XP_021038211
Ensembl:
MGP_CAROLIEiJ_G0019412
UniProt:
A0A6P5R7C0
LinkDB
All DBs
Position
14:55141483..55182093
Genome browser
AA seq
1875 aa
AA seq
DB search
MNSTPGDMRDAPAPSHPAPSHRQCLLPSVAHTPSVTEVTPAKKITFLKRGDPQFAGVRLA
VHQRTFKTFSSLMDELSQRMPLSFGVRSVTTPQGLHDLSALEQLQDGGCYLCSDRKPPKT
HREPGRLQRKSPSAGQSQVFQGGHEAPETSYSWKGPVAPRRMTLVKNGDPRCQQTVVLSH
KNTRSLAAFLGKASELLRFPVKQVYTSRGKKVDSLQTLLDGPSVLVCAGNEAFRCLEMEN
DRGNRTRKLSGVTARSERGCWGPNAKQSVIHSRGRSGGKLRQVSLTSERSGLSDHPASGH
QAWAGPALDRCPQDMPVPPGSLVAADDVEKKVCMNEDGSLSVEMKVRFQLLGEDTLRWSQ
RVGQASVFTAASGKDQDPREADRFCCRQEGYPWGILKPGAQGLGSYDGGCQEAFDVGQQS
QPSYDIWKNPLTTPEGTGPTPRRRWGLAKLSGCKSHWRQKANHRKGHDKDNASRVSTPRH
PRSVQPGSCCPWTPDSDTGSDTLHPVSSASSHSETDLESGEGLCLEDTGPHGSRPETQST
ERALSDTSSAKSREESSEGGGQLHRGSSQARVMASREQVTKGDNPCISTQSHLPLNHTGL
QTEKYRQGTRGQEIRGEPELRLPLVPSHSGSQDTQRDALPAPACAPAQWRQRKQKRPASV
VCLPSVSVPYQVAQKGHARQDHYCRDTQSSLDTALQMPMPQEREQACPGSPAPQSPSNSP
SAGNQASEDLRSPFSSSLDLQEPQATSKATTIAVSGSDCVCHSTHSVEPAGDTKCQAHSS
TPTPAHRGELGCLWDKAGTTPEPFSSSVLLDRCSEAEDPRTYHDCCCLQAAPSSPLAAPS
GQTQASISEACLGGSSFCPTPPKEQTCFGRESASNGSTSSGHSRADGFARPRRTLLVKSP
GVRSSLEEREADGGVTPSALPYASPDAVVREWLGNIPEKPVLMTYEMADENTEVPSDGSE
GPKEDPGDSCSLRVLGEPSQVKQQPPEGATDEHPEPAGVLSGPGSVCCRLGSDLHPDTTS
GERLKAPAEAGLGEGTRVDHGVSLCALPTRVAASTQIMKALLGSKPGRPSSLPEVSSTVA
QRLSSSAGAFIACLARLHFFDEGLGPLDGKVRLEESPKYQEMLRLSQTLWPGSELWQGQL
DFSLRKLTSHQALLGTEDITPTSSSGVDVSSGSGGSGESSVPCVMDNTLAPEKRDLPLKI
PSQRPDSRSQGYPEPMSHSTVSSVSQVRACATGGEETGTGGRKQTWGNAPEQSVHSTMLE
GDALSEETEGRVRERLQENSVHGKELPEEGARVCSQEMLAAGSQDGTGSPEDTRVPTDEA
GADAASGGLWPLDGREESTESPQHFSKSNSRVREHQSAHKLELGLEEISRLDARDCKQAC
IKASSGTREMTTSIAHKGSLDPDPIWVSKLLKKIEKAFMAHLADATAELRARWDLHDNHL
LDQMVTELEQDVGRRLQASTVMEVRKIQSRAGRMVPEPPREALRGQASLQTEQRRRRLQG
LRNFSAIPGQGPLSLTLEDGPTLKTALGTKSGAGPAEDEFCPCEICLKKKRTPRFPKDAA
TVSGAPVRKAFDLQQILQSKKGGSSNREAMEVAPQRTGRMLSQEDLGTVQGADEKQGLKL
AQGLRVAEGEEGEGKQRLRAEEDPEILKTEGSGCCAPEEDEATEEDGEICIGTAQESQQL
EGTEIGKEDTLHQSFRDGGTLEAPARQGTHSVEIQGSSRERQQEVEGRNQDVKEDSPWVS
SGESQGRVGSENTSLDQEGRLQNHHQRPGPQSHHTACSSRASSLDNCSQVSQKGSDGDLT
SGDLKCTKAKNSRVLHAERKVPMMYPESFSSEQEVPSSPRLPKQGKGEDEGSAGSLACTQ
VGGKVDGFGQDDLDF
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaccccaggagacatgagagatgctcctgcaccaagccaccctgcaccaagc
caccggcagtgtctcctgccctccgtggctcacactccctccgttactgaggtgacaccg
gccaagaagataaccttcctcaagagaggagatccccagtttgctggggttcgcctggct
gttcaccagcgcaccttcaagaccttcagctccctaatggatgagctgtctcagcgcatg
cctctttcctttggggtgcgttctgtcaccacaccccagggcttgcatgacctcagtgcc
ctggagcagctgcaagatgggggctgctacctctgctctgataggaagccccccaaaact
catagagagccaggccggcttcaacggaaaagcccctctgctgggcagtcacaggttttc
caaggtgggcatgaagctccagaaacatcctattcctggaaaggtcccgtggccccaagg
aggatgactctggtgaagaacggggatcctagatgccagcagacagtggttctcagtcac
aagaacaccaggagtctggcagctttcctcggcaaggcctctgagcttctgcgctttcct
gtcaagcaggtgtacaccagccgggggaagaaggtggactctctgcagacactccttgat
ggcccctctgtgctggtatgtgctgggaacgaggccttcagatgtctggagatggaaaat
gacagaggaaacaggaccagaaagttatctggtgtgactgcgaggagtgaacgtggttgc
tggggacctaacgccaagcaaagtgtcatacactcaaggggcaggtctggtggcaagctg
cggcaggtttccttgacgtcagagaggtctggtctcagtgaccatccagcatccggtcat
caagcctgggcaggccctgctttggacaggtgccctcaggacatgcctgtcccacctggt
tccttggtggctgctgatgatgtggagaagaaggtctgcatgaatgaggacggcagtctg
tctgtggaaatgaaagtccgcttccaacttctgggcgaggacaccctgcggtggtcccaa
agggtggggcaggccagtgtcttcacagcagccagtggaaaggatcaggacccgagggag
gctgacaggttctgttgcagacaggagggctacccttggggcatcttaaagcctggggca
cagggactgggttcctatgatggaggatgccaggaagcctttgatgtgggccaacagtca
cagcccagctatgacatatggaagaaccccctgaccacccctgagggcacaggaccaacc
cctcgaaggagatggggtctggctaagctctctggatgcaagagccactggagacagaag
gccaatcataggaaagggcatgacaaggataatgccagccgagtctcaactcccaggcac
cctagaagtgtccagccaggctcctgctgtccttggactccagacagcgatacaggcagt
gacaccttgcatccagtctcctcagcttcttcccacagtgagactgacctggaatctggt
gaaggcctctgcctagaggacacaggaccccatggctcgagacccgagacccaaagtaca
gaaagggccctgtctgatacatcaagtgccaagtctcgtgaggagtctagtgaaggtggt
ggtcagctccacagaggctcaagccaggcaagggtcatggcttcccgggagcaagtcacc
aagggtgacaacccctgtatttccacccagagtcacttacctttgaatcacacgggtctt
cagacagagaagtatagacagggcacgaggggtcaggagatcagaggagagcctgaactg
agactgcccctggttccaagccattctggctctcaggacacacagagagatgctctccca
gctcctgcctgtgccccagcccaatggaggcagagaaagcagaagaggccagctagtgtt
gtgtgtttgcccagtgtctctgtcccttaccaagtggctcagaaaggccatgccaggcag
gatcactattgcagggacactcaatcctcactggacacagcattgcaaatgccaatgcct
caggaaagagaacaggcctgcccaggaagcccagcaccacaatctccttcaaattcaccc
agtgctgggaatcaagcctctgaggatctgagatccccattctctagttctcttgatctt
caggaaccacaagccaccagcaaagccaccaccatcgccgtgagtggctcagactgtgtc
tgccacagcactcactctgtggagccagcaggggacaccaagtgccaggctcactcatca
actcccacacctgcccacaggggagagcttggttgcctgtgggacaaggcagggaccacc
cctgagcctttctcatcctctgtgctactggacagatgctctgaggcagaagatccaaga
acctaccacgattgctgctgcttacaggctgcgccatcttctccccttgcagcccccagt
ggtcagacacaagcctccatctctgaggcctgcttagggggcagtagtttctgcccaact
ccacccaaggagcaaacatgctttgggagggagtctgcaagcaacggtagcaccagcagc
ggtcacagtcgagcggatggctttgccaggcccaggaggactctgctggtgaagtccccc
ggtgtcaggagtagccttgaggagcgggaagcagatggtggtgtgacgccgagtgctctg
ccttacgcctctccagatgctgtggttcgtgagtggctaggcaacatcccagaaaagccg
gtactcatgacgtatgagatggcagatgagaacacagaggtgcccagtgatggctcagaa
ggtcccaaggaggacccgggtgatagctgctctttgagagtcctgggggaaccatctcag
gtcaaacagcagcccccggaaggggctaccgatgagcacccagagccagcgggagtcctc
tcaggacctggctctgtgtgctgcagactgggaagtgatctgcatccagatacaacatca
ggtgaaaggctcaaggcccctgcagaagctggactaggagaagggaccagagtggaccat
ggtgtaagtctatgtgcactccccactagggtcgcagcctctacacagatcatgaaggcc
ctgctgggctccaagccaggcaggcccagcagtctaccagaggtctctagcacagtagcc
cagaggctcagtagctctgctggggccttcattgcctgccttgccaggctccatttcttt
gatgagggtctggggcctctggatggcaaagtgaggcttgaagagtcccctaagtaccag
gagatgctgagactctcccagaccctgtggcctgggagtgagctttggcaaggccagctg
gacttcagcctcaggaagctcacttcgcaccaggctctgctagggactgaggacatcaca
cccacctcctcctccggtgtggatgtgagcagtggttctggaggctcaggggagagcagt
gtgccctgtgttatggataacaccctggctcccgagaagagagatttgcccttgaaaatc
ccctctcaaagacctgattccaggagccaggggtacccagagccaatgagtcattccaca
gtctcatctgtctcccaggtgagggcttgtgccaccggtggggaggagacgggtacagga
ggcaggaagcagacatggggcaatgccccagaacaatcggtccatagcacgatgctggaa
ggtgatgcactgtcagaagaaacagaagggagagtaagagaaaggctacaggaaaatagt
gtccatggaaaggagctgccagaagaaggggctagggtctgcagtcaggaaatgcttgca
gctggctctcaggatgggacaggttcaccagaagataccagagtgccaacagatgaagca
ggagctgatgcagcctctggaggactgtggcccctagatgggagagaggaatccacagag
tcccctcagcatttcagcaagagcaactcaagggttcgtgagcatcaaagcgctcacaaa
ctggagctaggattggaagagatatccagattggatgcaagggactgcaagcaagcctgc
atcaaggccagctcaggaaccagggagatgaccacatccatagctcacaagggatctctg
gaccctgacccaatctgggtgtccaagctgctgaagaagatagagaaagccttcatggct
cacctggctgatgccacagccgaactccgagcccgatgggaccttcatgacaatcacctg
ctggaccagatggtgaccgagctggagcaggatgtgggccgacggctgcaggcaagcact
gttatggaagtcaggaagatccagagccgggcagggaggatggttccagaaccaccccgg
gaagccctcagaggccaggcttctctacagacagagcagcgcaggcgtcgccttcagggc
ttgcgcaacttctcagctatccctggccagggtcccctctccctcaccctggaggatggg
cccacactcaaaacagccttagggaccaagtcaggtgcagggcctgcggaggatgagttc
tgtccctgtgaaatctgtctgaagaaaaagaggacccctagattcccaaaggatgctgca
acagtctctggtgctcctgtcagaaaggcctttgacctgcagcaaattctacagagcaag
aaaggaggaagcagcaatagagaggccatggaggtggcccctcagaggacaggaaggatg
ttgtctcaggaggacctcggaactgtccagggagctgatgagaagcaagggctgaaattg
gcacaagggcttagggtggctgagggagaggagggggaagggaaacagaggctgagagca
gaggaggatcccgagattctgaaaacagaaggatctggttgctgtgcaccagaagaggat
gaagccactgaggaagatggggaaatctgcatcggcactgcccaagaaagccagcagtta
gaggggactgagatcgggaaggaggacaccctgcaccagagctttagagatggaggcact
ttagaggctccagcaagacagggtactcactctgtggagattcagggatcttccagagaa
agacagcaggaggtagaaggaagaaatcaagatgtaaaggaagacagtccttgggtgagc
tcaggagagagccagggaagggtgggttctgaaaacaccagcctagaccaagaggggagg
ctccagaaccaccatcaaaggccaggtccccagagccaccacacagcatgctcctccagg
gcatcgtctctggacaactgttcacaggtgtctcagaaaggctcagatggagacttaaca
agtggagacctcaagtgcaccaaagccaagaacagcagggtcttacatgcagagaggaaa
gtccccatgatgtatccagaaagtttctcttctgagcaagaagtcccctccagcccaagg
cttccaaagcaagggaaaggggaagatgaaggatcagctggaagcttggcttgtacccag
gttgggggcaaggtagatggctttggccaggatgacttagatttctag
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integrated database retrieval system
