Mus caroli (Ryukyu mouse): 110309852
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Entry
110309852 CDS
T05910
Symbol
Spata13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X3
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
110309852 (Spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110309852 (Spata13)
Membrane trafficking [BR:
mcal04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
110309852 (Spata13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
RHG20_PH
Myosin_TH1
Motif
Other DBs
NCBI-GeneID:
110309852
NCBI-ProteinID:
XP_021038239
Ensembl:
MGP_CAROLIEiJ_G0019376
UniProt:
A0A6P7QCY9
LinkDB
All DBs
Position
14:51808899..51939489
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AA seq
1247 aa
AA seq
DB search
MTTAQDGHGQGATATCSASNPKAPKMVTSSACQNGGCKSSPSSDPEAGETRLSPSKLVRL
FSGSRKRMNSNSERPRSVVLVGNSSTWNALASFRKMGSFKRLKSSVLQGIQNREGAEVSK
EEPTGDPGRAAPNGTVAILGKGLGRCTSLGPVGDGAGSDCSDPEDTEDAFQRSTHRSRSI
RRAYGLGRISLLDLGRQPVPEPAMCEIQVRDPEPSRAVPLPRRSKSIDSLSVLKSSFKRK
SASNLTELQGERQVPSRTLSSFFTDPEKPGGSERRTRRWRSPIRAKDFDRVLRLVSNVKD
AAWKREAPRSAAPGPGPGLGDANPLLAPRSKLHDDYSRRTSSSVEPDARRGGSLSSPCIP
APCTTAPYAAPEPHLDVDTAVFPLETKSAQPLGNDGPCASSPSPIPTDPEGLSQGSSEAH
TGSQHPFNPVQLPTPLRPTTPKPQSPQSPGSTKCPSSLSVLSLSSAESEERTEDASHRQP
GPVSLQDTVLNTAGDVGGESGDSYFPENLDGATHPEEKKEEVTVTEDDWPQGSALEEEQN
EAPRISRRRWGSGRRTRPRPLSDYGQLAGRSLSIPEDAIAADPSDEDHVDRMHPASVTTT
SQDPCAPSGSCRGGRRRRPISVIGGVSFYGNTQVEDVENLLVQPAARPPVPAHQVPPYKA
VSARLRPFTFSQSTPIGLDRVGRRRQMKTSNVSSDGGAESSALVDDNGSEEDFSYEELCQ
ANPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDDQELGFKAGDVIQVLEASNKDWW
WGRNEDKEAWFPASFVRLRVNQEELPESCSSSHGEEQDEDTSKARHKHPESQQQMRTNVI
QEIMNTERVYIKHLKDICEGYIRQCRKHTGMFTVAQLATIFGNIEDIYKFQRKFLKDLEK
QYNKEEPHLSEIGSCFLEHQEGFAIYSEYCNNHPGACVELSNLMKHSKYRHFFEACRLLQ
QMIDIALDGFLLTPVQKICKYPLQLAELLKYTTQEHGDYNNIKAAYEAMKNVACLINERK
RKLESIDKIARWQVSIVGWEGLDILDRSSELIHSGELTKITRQGKSQQRIFFLFDHQLVS
CKKDLLRRDMLYYKGRMDMDEVELVDVEDGRDKDWSLSLRNAFKLVSKATDEVHLFCARK
QEDKARWLQAYADERRRVQEDQQMGMEIPENQKKLAMLNAQKAGHGKSKGYNSCPVAPPH
QSLPPLHQRHITVPTSIPQQQVFALAEPKRKPSIFWHTFHKLTPFRK
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagcgcaggatggccatgggcaaggtgccacagccacttgttcagcctccaac
ccgaaggcccccaaaatggtgacatcctcagcatgtcagaatggaggctgcaaaagcagc
cccagcagtgatcccgaagccggggaaaccaggctcagcccatccaagctggtacgtctc
ttctctggtagtcggaagaggatgaattcgaactccgagagacctcgctcagtggtcctt
gtggggaattcctccacgtggaatgccctggcctccttccgtaaaatgggctcctttaaa
agactaaaatcttctgtccttcaaggaattcagaaccgggagggagcagaagtttccaag
gaggagccaacaggagacccaggaagggctgctcccaatggcaccgttgccatcctggga
aagggcctgggcaggtgtacctccttgggccctgtaggagatggcgccgggtctgactgc
tcagaccccgaggacacggaggacgccttccagaggagcacacaccgttcgcgcagcatc
cgcagggcctatggcctgggccgcatcagcctgctggacctggggcggcagccagtgccg
gagcccgccatgtgtgagatccaagttcgcgaccctgaacccagcagggctgtgcctctg
ccacgcagaagtaagagcatcgacagcttgagcgtcctgaagagctcgttcaagcgcaag
tctgcatccaacctcacggaactgcagggtgaaaggcaggttccctccagaaccttgagc
agcttcttcacagaccccgagaagccgggtggctcagagagaagaaccagacgctggagg
agccccatccgggccaaggacttcgacagagtcctgagactggtgagcaatgtcaaggat
gcagcttggaagagggaggcccccaggagtgcagcccctggccctggacccggtctcggg
gatgcgaacccactacttgcaccacgaagcaagctacacgatgactactcgcgtcgtact
agcagcagcgtggagccagatgccaggcgtggcggctctttgtcctcaccctgtatccct
gcaccatgcaccactgcgccctacgcagctccggagccccacttagatgtggatactgca
gtattccccctggaaactaaaagtgctcagccactgggaaatgatggaccttgtgccagc
agtccctcaccaatccccacggacccagaagggttgagccaaggctccagtgaggcacat
actggcagccaacatccttttaatcccgtgcagcttcccactcctctgagacctaccaca
cctaagccccaaagccctcagagcccagggagtactaagtgccccagtagtctgagtgtg
ctgtctctcagttcagcggaaagtgaagagcggactgaggatgcttcacacaggcaaccg
ggacccgtgtccctccaggatactgtccttaatactgctggtgatgtggggggagaaagc
ggtgacagctattttcccgagaatctcgatggagccacccatccagaagagaagaaggaa
gaggtcacggtgactgaggatgactggccacagggctcagccctggaggaggagcagaat
gaggcaccccgaatctccaggaggaggtggggctcggggcgccgcacccggccacgacca
ctgtctgactatggccagctggccggcagaagcttgtccattcctgaagatgccattgct
gcagacccttcagatgaggaccacgtggacaggatgcacccagcaagtgtgactaccacc
agccaggatccatgcgccccctcaggctcttgcaggggaggccggagaaggcgacctata
tctgtgattggaggggtcagcttctatggcaacacccaggtagaggatgtggagaacctc
ttggtccaaccagcagccaggcctcctgtgcctgcacaccaagttccaccctacaaggct
gtgtctgcccgcctccggcccttcaccttctctcagagcactcccatcgggctggaccga
gtggggcggcgacggcagatgaaaacatccaatgtctcttcagatggaggtgcggagtct
tcggccttagtggatgataatggtagtgaggaagacttcagctatgaggagctctgccag
gccaaccctcggtacctgcagccaggaggggaacagctggccatcaatgagctcatcagc
gatggcagcgtggtctgtgcggaagcactgtgggaccatgtaactatggacgaccaggaa
ctgggcttcaaggctggtgatgtcatccaagttctggaagcttctaacaaggactggtgg
tggggcaggaatgaagacaaagaggcctggttccctgcaagctttgttaggcttcgagtc
aatcaggaggagctgcctgagagctgcagcagctcccatggggaagagcaggatgaggac
accagtaaagcccgccacaagcacccggagagccagcagcagatgcggaccaacgtcatc
caggagatcatgaacaccgagcgagtgtatatcaagcacctgaaggacatctgcgagggc
tatatccgacagtgtcgtaagcacacgggaatgttcaccgttgcgcagctagccactatt
ttcggaaacattgaagacatttacaaattccaaagaaagtttctgaaagaccttgagaaa
cagtacaacaaagaggaacctcacttgagtgaaataggatcctgctttcttgagcaccaa
gagggcttcgccatctactctgagtactgcaacaaccacccgggcgcctgtgtggagctg
tccaacctcatgaaacacagcaagtaccggcacttcttcgaggcctgccgcctgctccag
cagatgatcgacatcgccctggacggcttcctcctcacgcctgtgcagaagatctgcaaa
tacccgctgcagctggctgagctgctcaagtacaccacacaggagcacggcgattacaac
aatataaaggcagcctatgaagccatgaagaacgtggcctgcttgatcaatgaacgcaag
cgcaagctggagagcatcgacaagatcgcccgctggcaggtgtccatcgtaggctgggag
ggcctggacattctagaccgaagctccgagttgattcattccggagagctgaccaaaatc
accaggcagggcaagagccagcagcgcatcttcttccttttcgaccaccagctggtgtcc
tgcaagaaggacctgctgcgcagggacatgctatactacaagggccgcatggacatggac
gaggtggagcttgtggacgtggaggatgggcgggacaaagactggagcctcagcctgcgg
aatgccttcaagctggtcagcaaagccacggacgaggtccatctgttctgtgccagaaag
caagaagacaaggccaggtggctgcaggcctatgcggacgagaggcggcgggtgcaggag
gaccagcagatgggaatggaaatcccagaaaatcagaagaaactcgccatgttgaacgct
cagaaggcaggacatgggaaatctaaaggctacaacagctgtcctgtggccccaccccac
cagagcctgccgccccttcaccagcgccacatcactgtgcccaccagcatcccgcagcag
caggtctttgccttggctgagcccaagaggaagccatcgatattctggcacactttccac
aaactcacccccttccggaaatga
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