Mus caroli (Ryukyu mouse): 110310167
Help
Entry
110310167 CDS
T05910
Symbol
Zfr
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcal03041
]
110310167 (Zfr)
Spliceosome [BR:
mcal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110310167 (Zfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
110310167
NCBI-ProteinID:
XP_021038530
Ensembl:
MGP_CAROLIEiJ_G0019681
UniProt:
A0A6P5QVI6
LinkDB
All DBs
Position
15:8579114..8644452
Genome browser
AA seq
1082 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHSGAAAAAAAAQYSSVLWSSMDQQPASG
VAYSHPTTVASYTVHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTA
HTATDYGYTQRQQEAPPPPPPATTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAAVA
AAAQPQPSVAETYYQTAPKAGYSQGATQYTQAQQARQVTAIKPATPSPATTTFSIYPVSS
TVQPVAAAATVVPSYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQKQAAA
AAAAAAATAAWTGTTFTKKTPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEG
QKHKKKEAALKASQNTSSSNNSTRGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKL
HTKLGKPIPSTEPNVVSQATSSTAVSASKPTASPSSIGASNCTLNTSSIATSSVKGLSTT
GNSSLNSTSNTKVSAVPTNMAAKKTSTPKINFVGGNKLQSTGNKTEDLKGIDCVKNTPAA
SAVQIPEVKQDTVSEPVTPASLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFN
DPNAKEMHLKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEE
ERWRMEIRRYEEDMYWRRMEEEQHHWDDRRRMPDGGYPHGPPGPLGLLGVRPGMPPQPQG
PAPLRRPDSSDDRYVMTKHATIYPTEEELQAVQKIVSITERALKLVSDSLSEHEKSKNKE
GDDKKEGGKDRALKGVLRVGVLAKGLLLRGDRNVNLVLLCSEKPSKSLLSRIAENLPKQL
AVISPEKYDIKCAVSEAAIILNSCVEPKMQVTITLTSPIIREENMREGDVTSGMVKDPPD
VLDRQKCLDALAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVE
KAISSASSPQSPGDALRRVFECISSGIILKGSPGLLDPCEKDPFDTLATMTDQQREDITS
SAQFALRLLAFRQIHKVLGMDPLPQMSQRFNVHNNRKRRRDSDGVDGFEAEGKKDKKDYD
NF
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgccctgtagtttctttcacctatgtgcccagccggctgggggaagat
gccaaaatggcgaccggcaactactttggattcacccacagcggggcggcggcggcggcg
gctgcggcccagtatagttctgttctctggagcagcatggaccagcagccagcttcgggt
gtagcctattcccatccaactacagttgctagctacactgtccatcaggctccagtagct
gctcacacagttactgctgcttacgcaccagcagccgccaccgttgcagttgccaggcct
gctccagttgctgttgcagctgctgcaacagctgctgcatatggaggctaccccactgca
cacacagcaaccgactatggttacacccagaggcaacaagaagcaccaccaccaccaccc
ccagctactacacagaactaccaggactcatattcgtatgtaagatccacagcccctgct
gtagcttatgatagtaagcagtactaccaacagccaacagcaactgctgctgccgtggct
gctgctgcccagcctcagccttctgttgctgagacctactatcagacagcccctaaagca
ggttatagccaaggtgcaacacagtatactcaagcccagcaagctcgacaagtgacagcc
ataaaaccagccacaccaagtccagctaccactactttctccatttatcctgtgtcctcc
actgtacaaccggtggcagctgcggctactgtggtaccatcctatactcagagtgctact
tacagtaccacagcagttacttattctggtacatcttattcaggttatgaagcagccgta
tattcagctgcgtcttcctactaccaacagcagcagcagcaacagaagcaagcagcagca
gcagctgctgctgcagcagcaacagctgcctggacagggaccacctttactaaaaaaaca
ccattccaaaataaacaactgaaaccaaaacagcctcccaaaccaccccagattcattat
tgtgatgtttgtaagatcagctgtgctggaccacagacttataaagagcacttagaagga
cagaaacataaaaaaaaggaagccgcattgaaagcctctcaaaataccagcagcagcaac
aactcaactcgtgggacacaaaatcagctacgttgcgagctctgtgatgtgtcttgtaca
ggagcagatgcatatgctgcccacattcgtggtgctaagcatcagaaagtggttaaatta
cacacaaaacttggtaaacctattccttcaacggaaccaaatgttgttagccaagctact
tcttcaacagctgtatctgcttcaaaaccaactgcctctccttcaagtattggcgcaagc
aattgtaccctgaacacgtcatcaattgcaacttcttcagtgaaaggtctttcaactaca
ggaaactcgtctcttaatagtacatccaacactaaagtatcagcggtacctaccaatatg
gctgccaagaaaacatctacacccaaaataaactttgttggtggaaataagctacagtca
acaggaaataaaactgaagacttaaaaggaattgactgtgttaaaaatactcctgctgcc
tctgctgtgcagattccagaagtaaagcaagatacagtgtcagaaccggtcacccctgca
tcccttgctgctttgcagagtgacgtacaaccagtgggacatgactatgttgaagaggta
cgaaatgatgaaggaaaagtcattcgcttccactgcaaattatgtgaatgcagctttaat
gaccccaatgctaaagagatgcacctaaaaggacgaagacatagacttcagtataaaaaa
aaagtaaatccagatttgcaagtagaagtgaagcccagtattcgtgccagaaaaattcaa
gaagagaaaatgagaaagcaaatgcagaaggaggaatattggcggagacgagaagaggag
gaacgctggaggatggaaataagacgttatgaagaagacatgtactggagaagaatggag
gaagaacagcatcattgggatgaccgcagacgaatgcctgatggcggctatcctcatggt
cctccgggcccactaggtcttttgggagtccgaccaggcatgcctccccagccgcagggt
cctgcacccttacggcgtcctgactcatctgatgatcgttatgtaatgacaaaacatgca
actatttatccaactgaagaagagttacaagccgttcagaagatcgtctctatcactgaa
cgtgctttaaagcttgtctcagacagtttgtcggaacatgagaagagcaagaacaaagag
ggagatgataagaaagagggaggtaaagacagagctctgaaaggggtgttgcgagtaggc
gtgctggcaaaaggattacttctccgaggagacaggaatgtcaaccttgttttgctgtgc
tcagaaaaaccttcaaagtcattattaagccgtattgcagaaaacctacccaaacagctt
gctgttataagtcctgagaagtatgacataaaatgtgccgtgtctgaggcagcgataatt
ttgaactcgtgtgtggagcccaaaatgcaagtcactatcaccctgacatctccaattatt
cgagaagagaacatgagggaaggagatgtaacctcgggtatggtgaaagacccaccggac
gtcttggacaggcaaaaatgccttgacgctctggctgctctacgccacgctaagtggttc
caggctagagctaatggcctacagtcgtgtgtgattatcatacgtattctccgagacctt
tgtcaacgagttccaacgtggtctgattttcctagctgggctatggagttactggtggag
aaagcaattagcagtgcttcgagtcctcaaagccctggagatgccctgagaagagtattt
gagtgcatttcttcagggattattctcaaaggcagccctggacttctggacccttgtgaa
aaggatccctttgacactttggcaacaatgactgaccaacagcgtgaagacattacatcc
agtgcacagtttgcattgagactgcttgcattccgtcagatacacaaagttctggggatg
gatccactaccacaaatgagtcagcgcttcaacgtccacaacaacaggaaacgaagaagg
gatagtgatggagtggatggatttgaagctgaggggaagaaagacaaaaaggattatgat
aacttttaa
DBGET
integrated database retrieval system
