Mus caroli (Ryukyu mouse): 110310344
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Entry
110310344 CDS
T05910
Symbol
Hnrnpa1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X2
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03040
Spliceosome
mcal05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110310344 (Hnrnpa1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110310344 (Hnrnpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110310344 (Hnrnpa1)
03041 Spliceosome [BR:
mcal03041
]
110310344 (Hnrnpa1)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110310344 (Hnrnpa1)
mRNA cycle factors
Common to processing body (P body) and stress granule
110310344 (Hnrnpa1)
Spliceosome [BR:
mcal03041
]
Common components
Common spliceosomal components
hnRNP proteins
110310344 (Hnrnpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
OB_RNB
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
110310344
NCBI-ProteinID:
XP_021038873
Ensembl:
MGP_CAROLIEiJ_G0020373
UniProt:
A0A6P5R2K9
LinkDB
All DBs
Position
15:97087013..97092350
Genome browser
AA seq
275 aa
AA seq
DB search
MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVK
KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ
KYHTVNGHNCEVRKALSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGR
GGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGRS
SGPYGGGGQYFAKPRNQGGYGGSSSSSSYGSGRRF
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgagagatccaaacaccaagagatccaggggctttgggtttgtcacatatgccactgtg
gaagaagtggatgctgccatgaatgcaagaccacacaaggtggatggaagagttgtggaa
cctaagagagctgtctctagagaagattctcagcgaccaggtgcccacttaactgtgaaa
aagatctttgttggtggtattaaagaagacactgaagaacatcacctacgagattatttt
gagcagtatgggaagattgaagtgatagaaattatgactgacagaggcagtgggaaaaag
aggggctttgcttttgttacctttgatgaccatgactctgtggataagattgttattcag
aaataccatactgtgaatggccacaactgtgaagtaagaaaggctctgtcaaagcaagag
atggctagtgcttcatccagccagagaggtcgcagtggttctggaaactttggtggtggt
cgtggaggcggttttggtggcaatgacaattttggtcgaggagggaacttcagtggtcgt
ggtggctttggtggcagccgtggtggtggtggatatggtggcagtggggatggatataat
ggattcggcaatgatggaagcaattttggaggtggtggaagctacaatgattttggcaat
tacaacaatcagtcttccaattttgggccgatgaagggaggaaactttggaggcaggagc
tctggcccttatggtggtggaggccagtactttgctaaaccacggaaccaaggtggctat
ggcggttccagcagcagcagtagctatggcagtggcaggaggttctaa
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