Mus caroli (Ryukyu mouse): 110310350
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Entry
110310350 CDS
T05910
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03410
Base excision repair
mcal04140
Autophagy - animal
mcal04217
Necroptosis
mcal04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110310350
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110310350
09143 Cell growth and death
04217 Necroptosis
110310350
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
110310350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcal03036
]
110310350
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110310350
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcal04147
]
110310350
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
110310350
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
110310350
MMR (mismatch excision repair)
Other MMR factors
110310350
Exosome [BR:
mcal04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
110310350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
Nop14
NOA36
Motif
Other DBs
NCBI-GeneID:
110310350
NCBI-ProteinID:
XP_021038885
UniProt:
A0A6P5QWC4
LinkDB
All DBs
Position
15:31094113..31095368
Genome browser
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHLDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDIAKKLGEMWNNTAADDKQPYEKKAAXLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKKEEDDEEDEEDEEEEEEEEDEDEEEEDADE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcctcatatgcattctttgtg
caaacttgccgggaggagcacaagaagaagcacctggatgcttctgtcaacttctcagag
ttctccaagaagtgctcagagaggtggaagaccatgtctgctaaagaaaaggggaaattt
gaagatatggcaaaggctgacaaggctcgttatgaaagagaaatgaaaacctacatcccc
cccaaaggggagaccaaaaagaagttcaaggaccccaatgcacccaagaggcctccttcg
gccttcttcttgttctgttctgagtaccgccccaaaatcaaaggcgagcatcctggctta
tccattggtgatattgcaaagaaactaggagagatgtggaacaacactgcagcagatgac
aagcagccctatgagaagaaagctgccaanctgaaggagaagtacgagaaggatattgct
gcctacagagctaaaggaaaacctgatgcagcaaaaaagggggtggtcaaggctgaaaag
agcaagaaaaagaagaaagaggaagatgatgaggaggatgaagaagatgaggaagaggaa
gaagaagaggaggatgaagatgaggaagaagaagatgctgatgaataa
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