KEGG   Mus caroli (Ryukyu mouse): 110310350
Entry
110310350         CDS       T05910                                 
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03410  Base excision repair
mcal04140  Autophagy - animal
mcal04217  Necroptosis
mcal04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    110310350
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    110310350
  09143 Cell growth and death
   04217 Necroptosis
    110310350
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    110310350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mcal03036]
    110310350
   03400 DNA repair and recombination proteins [BR:mcal03400]
    110310350
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mcal04147]
    110310350
Chromosome and associated proteins [BR:mcal03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    110310350
DNA repair and recombination proteins [BR:mcal03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     110310350
   MMR (mismatch excision repair)
    Other MMR factors
     110310350
Exosome [BR:mcal04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   110310350
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 HMG_box_5 Nop14 NOA36
Other DBs
NCBI-GeneID: 110310350
NCBI-ProteinID: XP_021038885
UniProt: A0A6P5QWC4
LinkDB
Position
15:31094113..31095368
AA seq 215 aa
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHLDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDIAKKLGEMWNNTAADDKQPYEKKAAXLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKKEEDDEEDEEDEEEEEEEEDEDEEEEDADE
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcctcatatgcattctttgtg
caaacttgccgggaggagcacaagaagaagcacctggatgcttctgtcaacttctcagag
ttctccaagaagtgctcagagaggtggaagaccatgtctgctaaagaaaaggggaaattt
gaagatatggcaaaggctgacaaggctcgttatgaaagagaaatgaaaacctacatcccc
cccaaaggggagaccaaaaagaagttcaaggaccccaatgcacccaagaggcctccttcg
gccttcttcttgttctgttctgagtaccgccccaaaatcaaaggcgagcatcctggctta
tccattggtgatattgcaaagaaactaggagagatgtggaacaacactgcagcagatgac
aagcagccctatgagaagaaagctgccaanctgaaggagaagtacgagaaggatattgct
gcctacagagctaaaggaaaacctgatgcagcaaaaaagggggtggtcaaggctgaaaag
agcaagaaaaagaagaaagaggaagatgatgaggaggatgaagaagatgaggaagaggaa
gaagaagaggaggatgaagatgaggaagaagaagatgctgatgaataa

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