KEGG   Mus caroli (Ryukyu mouse): 110310385
Entry
110310385         CDS       T05910                                 
Symbol
Ccnt1
Name
(RefSeq) cyclin-T1 isoform X1
  KO
K15188  cyclin T
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03250  Viral life cycle - HIV-1
mcal05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110310385 (Ccnt1)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    110310385 (Ccnt1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcal03021]
    110310385 (Ccnt1)
Transcription machinery [BR:mcal03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     110310385 (Ccnt1)
    Brd4/P-TEFb complex
     110310385 (Ccnt1)
    7SK RNP complex
     110310385 (Ccnt1)
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N
Other DBs
NCBI-GeneID: 110310385
NCBI-ProteinID: XP_021038955
Ensembl: MGP_CAROLIEiJ_G0020236
UniProt: A0A6P5QWG6
LinkDB
Position
15:complement(92238051..92266906)
AA seq 725 aa
MEGERKNNNKRWYFTREQLENSPSRRFGVDSDKELSYRQQAANLLQDMGQRLNVSQLTIN
TAIVYMHRFYMIQSFTQFHRYSMAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPD
TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATN
SLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHE
FLQILEKTPSRLKRIRNWRAYQAAMKTKPDDRGADENTSEQTILNMISQTSSDTTIAGLM
SMSTTSTTAVPSLPSSEESSSSLTSVDMLQGERWLSSQPPFKLEAAQGHRTSESLALIGV
DHSLQQDGSSAFVSQKQASKSVPSAKVSLKEYRAKHAEELAAQKRQLENMEANVKSQYAY
AAQNLLSHDSHSSVILKMPIEGSENPERPFLDKADKSALKMRLPVASGDKAASSKPEEIK
MRIKVHSAGDKHNSLEDSVTKSREHKEKQRTHPSNHHHHHNHHSHRHSHLQLPVGPVSKR
PSDPKHSSQTSTLAHKTYSLSSTLSSSSSTRKRGPPEETGAAVFDHPAKIAKSTKSSSLN
FPFPPLPTMTQLPGHSSDTSGLPFSQPSCKTRVPHMKLDKGPPGANGHNTTQSIDYQDTV
NMLHSLLSAQGVQPTQAPAFEFVHSYGEYMNPRAGAISSRSGTTDKPRPPPLPSEPPPPL
PPLPK
NT seq 2178 nt   +upstreamnt  +downstreamnt
atggagggagagaggaagaacaacaacaagcggtggtattttactcgcgagcagctggag
aacagcccgtcgcgtcgctttggcgtggactccgataaagaactctcctaccgccagcag
gccgccaatctcctccaggacatgggacaacgtctgaacgtctcacaactgacgatcaat
actgctatagtgtacatgcaccgattctacatgattcagtcttttacacagtttcatcgc
tattccatggctccagcggccttgtttctagcagcaaaagtagaagaacaaccaaaaaaa
ttggagcatgtcatcaaggtggcgcacacttgcctccacccacaggagtcacttcctgac
acgaggagtgaggcttacctacaacaagttcaagatctggtgattttagagagtataatt
ttgcagaccttagggtttgaactaacaattgatcacccacatacacatgtggtaaagtgc
acccagcttgttcgagcaagcaaggacttagcacagacatcttacttcatggcaaccaac
agcctgcatttgaccacatttagcctgcagtacacacctcctgtggtggcctgtgtctgc
atccatctggcttgcaagtggtccaactgggagatcccagtctcaactgacgggaagcac
tggtgggagtatgttgacgccactgtgaccttggaactgttagatgaactgacacatgaa
tttctacagattctagagaaaactccaagcaggctgaaacgtattcggaattggagggcg
taccaggctgccatgaaaaccaagccagatgaccggggagcagatgaaaacacgtcggag
cagacaatcctcaacatgatttctcagacctcttcagacacaactatcgcaggattaatg
agcatgtcaactacgtctacaactgcagtgccttccctgccttcctctgaagagtcatcg
agcagtctaactagtgtggatatgttgcagggcgagcggtggctgtcttcccaacctccc
tttaaactagaagctgcccagggtcatcggactagtgagagtttagcacttattggcgtt
gatcattccttgcaacaggatggttccagtgcgtttgtttcccagaagcaggcgagcaag
agcgtgccatccgctaaggtttcacttaaggagtaccgtgcaaagcacgcggaagaattg
gctgctcagaagaggcagctggagaacatggaggccaatgtgaagtctcagtatgcatat
gccgcccagaatctcctgtctcacgacagccattcttcagttattctcaaaatgcccatt
gagggctcagaaaaccctgaacgtccttttctggataaggctgacaaatcagctctgaaa
atgagactccctgtggccagtggggataaagcagcttcttccaagccagaggagatcaag
atgcgcattaaagttcactctgcgggggataagcacaattcccttgaagacagtgtcacc
aagagccgggaacacaaggagaagcagaggactcacccgtctaaccaccaccaccatcac
aaccaccactcacacaggcactctcacttacagctgccagtcggccccgtgagcaaacgc
ccaagtgatccaaaacacagcagccagacaagcaccttagcacacaaaacctacagcttg
tccagtactttgtcttcttcgagctcgactcgtaaaaggggtcccccggaagagactggg
gcagcagtatttgatcatccagccaagattgccaagagtactaaatcttcttccttgaat
ttccccttccccccccttcctacaatgacccagttgcctgggcatagctcagacacaagt
ggcctgcccttttcacagcctagctgtaaaactcgagttcctcatatgaaactggataaa
ggccctcctggggctaatggtcacaacacaactcagtcaatagattatcaagacactgtg
aatatgctccactccctgcttagtgcccagggtgttcagcccacacaggcccctgcattt
gaatttgtccactcttatggtgaatatatgaatcccagagctggtgccatctcctccaga
tctggcactacagacaaacctcggccaccacccctcccatcagaaccccctccaccactt
ccacctcttcctaagtga

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