Mus caroli (Ryukyu mouse): 110310483
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Entry
110310483 CDS
T05910
Symbol
Calcoco1
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1
KO
K25828
calcium-binding and coiled-coil domain-containing protein 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110310483 (Calcoco1)
04131 Membrane trafficking [BR:
mcal04131
]
110310483 (Calcoco1)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
110310483 (Calcoco1)
Membrane trafficking [BR:
mcal04131
]
Autophagy
ER-phagy
ER-phagy recepters
110310483 (Calcoco1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CALCOCO1
SKICH
Zn-C2H2_12
Crescentin
ACBP4_C
CC4_CEP85
DUF724
Vps23_core
CENP-F_leu_zip
zf-Tbcl_FmdE
Motif
Other DBs
NCBI-GeneID:
110310483
NCBI-ProteinID:
XP_021039135
Ensembl:
MGP_CAROLIEiJ_G0020361
UniProt:
A0A6P5R9B9
LinkDB
All DBs
Position
15:complement(96553429..96569181)
Genome browser
AA seq
691 aa
AA seq
DB search
MEESSLSRAPSRGGVNFLNVARTYIPNTKVECHYTLPPGTMPSASDWIGIFKVEAACVRD
YHTFVWSSVPESTTDGSPTHASVQFQASYLPKPGAQLYQFRYVNRQGRVCGQSPPFQFRE
PRPMDELVTLEEADGGSDILLVVPKATVLQNQLDESQQERNDLMQLKLQLEDQVTELRSR
VQELETALATARQEHSELTEQYKALSRSHGELSEERDILSQQQGDHVARILELEDDIQTM
SDKVLMKEVELDRVRDTVKALTREQEKLLRQLKEFQADKEQSEAELQTVREENCCLNTEL
QEAKSRQEEQGAQVQRLKDKLAHMKDTLGQAQQKVAELEPLKEQLRGVQELAASSQQKAA
LLGEELASAAGARDRTIAELHRSRLEVAEVNGRLAELSLHMKEEKCQWSKERTGLLQSME
AEKDKILKLSAEILRLEKTVQEERSQSHVFKTELAREKDSSLVQLSESKRELTELRSALR
VLQKEKEQLQTEKQELLEYMRKLEARLEKVADEKWTEDAATEDEEATAGLSCPASLTDSE
DESPEDMRLPSYGLCESGNTSSSPPGPREASSLVVINQPAPIAPQFSGPGEASSSDSEAE
DEKSVLMAAVQSGGEEASLLLPELGSAFYDVASAFTVSSLSEASPGVPANPPWKECPICK
ERFPAESDKDALEGHMDGHFFFSTQDPFTFE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtcatcactaagccgggcaccatcccggggtggagtcaacttcctgaatgtg
gcccgcacctacatccccaacaccaaggtggaatgtcactacactctgcctccgggtacc
atgcccagtgccagtgactggattggcatttttaaggtggaagctgcctgcgttcgagat
tatcacacgtttgtgtggtcctcagtaccagaaagtacaactgatggctcccccactcac
gccagtgtccaattccaagccagctacctgcccaaaccaggagcccaactctaccagttc
cggtatgtgaaccgccagggccgggtgtgtgggcaaagcccccccttccagttccgagag
ccaaggcccatggatgagctggtgaccctggaggaggctgatggaggctctgacatcctg
ttggttgtccctaaggccaccgtgcttcagaaccagctggatgagagccagcaggagcgg
aatgacctgatgcagctgaagctgcagttggaggatcaggtgacagagctgaggagccga
gtgcaggagctggagacagctctggccacggccaggcaggagcattcggagctcaccgag
cagtacaaggcgctctcccggtcccatggggagctctcagaagagagggacatcctgagc
cagcagcagggagaccatgtggcccgtatcttggagttagaggatgacatccagaccatg
agtgacaaagtgctgatgaaggaggtggagctggacagggttagagacacagtgaaggcc
ctgacacgggaacaagagaagctcctgaggcagctgaaggaattccaggcagacaaggag
cagagtgaggctgagttacaaacggtccgagaggagaactgctgcttaaatacagagctg
caggaggccaagagccgtcaagaagagcaaggtgctcaggtccagcgactgaaggacaag
ctggcccacatgaaggacaccctgggccaagcccagcagaaagtggccgagctggagccc
ctgaaagagcagctccgaggagtccaggaacttgcagcctcaagccagcagaaagcggcc
ctccttggggaggagttggccagtgcagcaggagctagagaccgaaccatagctgaacta
caccgcagccgactggaggtggctgaagtcaacggccgactggctgagctcagcctgcac
atgaaggaggaaaagtgccagtggagcaaggaacggacagggctgctgcagagcatggag
gctgaaaaggataagatcctgaagctgagtgcggagatcctccgactggagaagacagtg
caggaggagaggagccagagtcacgtgttcaagactgagctggcccgagaaaaggattct
agcctggtgcagttgtcagagagtaagcgggagctcacagagctgcggtcagccctccgt
gtgcttcagaaggagaaggagcagttgcagacggagaaacaggaactgctggagtacatg
aggaagctggaggcccgcctggagaaggtggcggatgagaaatggactgaagatgctgcc
acagaggacgaggaagccactgctgggctgagctgccctgcatctctgacagactcagag
gatgagtccccagaagacatgcggctcccatcctatggcttgtgtgagagtggaaacaca
agctcctctcctcctgggcctcgggaggcttcttctcttgttgtcatcaaccagccagca
cccattgctccccagttctcagggccaggggaggccagcagctcagactcagaggctgaa
gatgagaagtcagtcctgatggcagcagtgcagagtgggggtgaggaagccagcctcctg
cttcctgagctcggcagtgccttctatgatgtggccagtgcctttacagtgagttccctg
tcagaggccagccctggggtcccagccaaccctccatggaaggagtgtcccatctgcaag
gagcgctttcctgctgagagtgacaaggacgccctagagggccacatggatgggcatttc
ttcttcagcacccaggaccctttcacctttgagtga
DBGET
integrated database retrieval system
