Mus caroli (Ryukyu mouse): 110310554
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Entry
110310554 CDS
T05910
Symbol
Col14a1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X2
KO
K08133
collagen type XIV alpha
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
110310554 (Col14a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mcal00535
]
110310554 (Col14a1)
Proteoglycans [BR:
mcal00535
]
Extracellular matrix (ECM) proteoglycans
Others
110310554 (Col14a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
vWA_SIBA-E
Arylsulfotran_N
VWA_3
Motif
Other DBs
NCBI-GeneID:
110310554
NCBI-ProteinID:
XP_021039261
Ensembl:
MGP_CAROLIEiJ_G0019798
UniProt:
A0A6P5R6A3
LinkDB
All DBs
Position
15:49469418..49678739
Genome browser
AA seq
1794 aa
AA seq
DB search
MMIWQCKMRDWLILAFLAVACFCTIVKGQVAPPTRLRYNVISHDSIQISWKAPRGKFGGY
KLLVAPASGGKTNQMNLQNTATKAIIQGLLPEQNYTVQLIAYYKDKESKPAQGQFRIKDL
EKRKDPTKPKVKVVDKGNGSKPTPPEEVKFFCETPAIADIVILVDGSWSIGRFNFRLVRN
FLENLVTAFNVGSEKTRIGLAQYSGDPRIEWHLNAFNTKDEVIDAVRSLPYKGGNTLTGL
ALNFIFENSFKPEAGSRSGVSKIGILITDGKSQDDIIPPSRNLRESGVELFAIGVKNADL
SELQEIASEPDSTHVYNVAEFDLMHTVVESLTRTVCSRVEEQDKEIKASALATIGPPTEL
ITSEVTARSFMVNWTQTPGKVEKYRVVYYPTRGGKPEEVVVDGSVSSIVLKNLMSSTEYQ
IAVFAVSAHTASEGLRGTETTLALPMASDLQLYDVTENSMRVRWDAVPGATGYLILYAPL
TEGLAGDEKEMKIGETHTDIELSGLFPNTEYTVTVYAMFGEEASDPATGQETTLPLTPPR
NLRISNVGSNSARLTWDPPSGKISGYRIVYTSADGTEINEVEVDPITTFPLKGLTPLTEY
SIAIFSIYEEGQSLPLVGEFTTEEVPAQQYLEIDEVKTDSFRVTWHPLSAEEGQHKLMWI
PVYGGKTQEVDLKEEQDSYVIEGLDPGTEYEVSLLAVLDDGSESEVVTAVGTTLDDFWTE
APTAIEPTSPVTSVLQTGIRNLVVDDETATSLRVSWDISDSNVEQFRVTYLTAHGDPMEE
VVMVPGVQNSLLLKTLLPDTEYKVTVTPIYTVGEGVSVSAPGKTLPSSGPQNLRVSEEWY
NRLRITWDPPSGPVKGYRIVYKPVSVPGQTLETFVGADINTIVMTNLLSGMDYTVKIFAS
QASGFSDALTGLVQTLFLGVTDLQANQVEMTSLCARWQIHRHATAYRIVLESLQDTQAQE
STVGGGVNRHCFYGLQPDSEYKISVYTKLQELEGPSVSIMQKTQSLPTEPPTFPPTIPPA
KEVCKAAKADLVFMVDGSWSIGDDNFNKIINFLYSTVGALDKIGADGTQVAMVQFTDDPR
TEFKLDSYKTKETLLDAIRHISYKGGNTKTGKAIKHVRDTLFTSDSGTRRGIPKVIVVIT
DGRSQDDVNKISREMQADGFNIFAIGVADADYSELVQIGSKPSSRHVFFVDDFDAFKKIE
DELITFVCETASATCPMVHKDGVDLAGFKMMEMFGLVEKDFSAVEGVSMEPGTFNLFPCY
QIHKDALVSQPTKYLHPEGLPSDYTMSFLFRILPDTPQEPFALWEILNKNSEPLVGIILD
NGGKTLTYFNYDYTGDFQTVTFEGPDIRKMFYGSFHKLHVVVSKTLAKVVVDCKEVGQKA
INASANITLDGVEVLGRMVRSRGPNGNSAPFQLQMFDIVCSTSWASKDRCCELPGLRDEE
SCPDLPRSCSCSETNEVALGPAGPPGGPGLRGPKGQQGEQGPKGPEGPRGETGPAGPQGP
PGPQGPSGLSIQGMPGMPGDKGDKGDAGLPGPQGVPGGVGSPGRDGSPGQRGFPGKDGSS
GPPGPPGPIGIPGAPGVPGITGSMGPQGALGPPGVPGAKGERGERGDLQSQAMVRAVARQ
VCEQLIQSHMARYTAILNQIPSQSSSIRTIQGPPGEPGRPGSPGTPGEQGPPGTPGFPGN
AGVPGTPGERGLTGVKGEKGNPGIGTQGPRGPPGPAGPSGESRPGSPGPPGSPGPRGPPG
HLGVPGPQGPSGQPGYCDPSSCSAYGVGVSHPDQPEFTPVQDEQEAMDLWSAGI
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgatgatttggcagtgcaagatgcgggactggctgattctggcttttttggcggttgct
tgtttctgcaccattgtcaagggacaagtggctccacccacaaggttaagatataatgtg
atttcccatgatagtatacagatttcatggaaagcaccaagagggaaatttggtggctac
aaactgctcgtggctccagcttcaggaggaaagaccaaccagatgaatctccagaacact
gcaacaaaagcgattattcaaggcctcctgccagagcagaactacacagttcaactcatt
gcctactataaagacaaggaaagcaagcccgctcaaggccagttcagaattaaagattta
gagaaaagaaaggatccaacaaagcccaaagtcaaggttgtggacaaaggaaacggaagt
aaaccaactccaccagaagaggtaaaattcttctgtgagactccagccatcgctgacatt
gtcatcctggtggatgggtcatggagtattgggagattcaacttcaggctggtgcgcaat
ttcttggaaaacctggtcacagcattcaacgtgggctcagaaaagacaagaattggcttg
gcacagtacagtggggaccccagaatagagtggcacttgaatgcctttaacacaaaagat
gaggtgattgatgctgtccgaagccttccatacaaaggaggaaataccctaacaggtctt
gctttgaactttatttttgagaatagctttaaaccagaagcaggatcgaggagtggagtt
tccaagattggcattttgatcacagatggaaaatctcaggatgatattatcccaccatct
agaaacctccgtgagtctggtgtagagctgtttgccataggggttaaaaatgccgacctg
agtgagctgcaggagatcgcctctgagccagacagcacccatgtgtacaatgttgctgag
ttcgacctgatgcacacagtggtggagagcctgacccgtactgtatgctctagagtggaa
gagcaggacaaggagattaaagcctcagcccttgccaccatcgggccacctacagagctg
atcacttctgaagtcactgccaggagctttatggttaactggactcagaccccaggaaaa
gtggaaaaatacagagttgtgtattatcccaccagaggtggaaagccagaggaggtggtg
gtggatgggagtgtatcttccatagtgttgaaaaacttgatgtcttcaactgaataccag
atagcagtgtttgcagtatctgcccacacagctagtgaaggcctgcggggaacagagacc
acactggccttgcccatggcttccgacctccagctgtacgatgtgactgagaacagcatg
cgcgtcaggtgggatgcggtacctggagccacaggctatctgattctctatgctcctctc
acagaaggtctggctggagatgagaaagagatgaaaatcggagagacacacacagacatt
gaactgagtgggctattccccaatacagaatatacagtcactgtgtatgccatgtttgga
gaagaggccagcgatcctgctacaggacaagagacaaccctacccttaaccccaccaaga
aatttgcggatctccaatgttggctctaacagcgctcggttaacctgggaccccccttcg
ggaaagatcagtggttacagaattgtgtataccagtgcagacgggacagaaatcaatgag
gttgaagtcgatcctatcactacattccctctgaaaggcttgacccccctcacggagtac
tccattgcaattttctccatctacgaggaggggcagtccttgcccctggttggagagttt
accacagaggaagttcccgcccagcaatacttggaaattgatgaggtgaagacagacagt
tttcgagtgacctggcatccgctctctgctgaggaggggcagcacaagctgatgtggatt
ccggtctatggcgggaagacccaggaggttgacctcaaagaagaacaggactcttacgtt
attgaaggcctggatcctggaaccgagtacgaagtctccctgttagctgtgcttgatgac
ggaagcgagagtgaggtggtgaccgccgtgggaaccacacttgatgatttttggactgaa
gcacccacagccatagaacctaccagccctgtgacttcagttctccagacaggaatcaga
aacctggttgtagatgacgaaactgctactagcctgcgggtatcgtgggacatttctgac
agcaatgtggagcagtttagggtgacctacctgacagcccacggggaccctatggaagaa
gtggttatggtgcctggagtgcaaaacagtctccttctgaagactctacttccagacact
gagtataaagtcacggtaacccctatctatactgtgggagaaggcgtcagcgtctccgct
cctgggaagactttgccctcctctggtcctcaaaacttaagggtctcagaagaatggtac
aaccgtttacgcattacatgggacccaccctctggccctgtgaagggctataggattgtc
tacaaacctgtgagtgtccctggtcaaactctggagaccttcgtgggtgctgacatcaac
accattgtcatgacaaatctcctcagtggaatggactacactgtgaagatctttgcttcc
caggcgtcaggcttcagtgatgctctgactggcctcgtgcaaacactgttcttgggggtg
acagatctccaagccaatcaggttgaaatgacaagtttgtgtgctcggtggcaaatacat
cgccatgccacagcctacaggatagttctagaatcccttcaggacacacaagcacaggaa
tccacggtgggaggaggcgtaaacaggcattgcttctatggacttcagcctgattcggag
tataaaatcagtgtttacacaaagctccaggagctagagggacccagtgtgagcatcatg
cagaaaacacagtcacttcccacggaaccaccaacttttcctccaaccatcccaccagca
aaggaagtatgtaaagctgccaaggcagacctggtattcatggtggatggatcttggagc
ataggagatgacaatttcaataagatcatcaattttctgtatagcactgtgggagccctg
gacaagattggtgcagatggaactcaggtggcaatggttcagttcactgatgacccccga
acagaattcaagcttgattcttacaaaaccaaagagacccttcttgatgcaattagacac
atttcctacaaaggaggaaatactaaaacaggaaaagctatcaagcatgttcgggatacc
ttatttacatcagactcagggacaaggagaggcatcccaaaggtcatcgtggttataact
gatggacggtcacaagatgatgtcaacaaaatctccagggagatgcaggcagatggtttc
aacatctttgccatcggtgtggctgacgctgactactcagagttggttcagatcggcagc
aagcccagctcacgacacgtcttctttgtggatgactttgatgcctttaagaaaattgaa
gatgaattgattacttttgtctgtgaaactgcatcagcaacctgcccaatggtgcacaaa
gatggagttgatcttgcagggtttaagatgatggaaatgtttggtttggttgaaaaggac
ttttctgcagtggaaggagtatctatggaacctggtaccttcaatttgttcccgtgctat
caaatccataaggatgctctggtttctcagccaacaaagtatctgcacccagaaggactg
ccttcggactatacaatgagtttcctgttccggattcttcctgacacgccacaggagcca
tttgctctttgggagattttaaacaaaaattctgagccgctagttgggatcatattggac
aatggtggaaaaactctaacttatttcaactatgactatactggagattttcaaactgtg
acttttgaaggacctgacatcaggaaaatgttctatggaagctttcacaagctccatgtt
gttgtcagcaagactctggccaaagtggttgttgactgcaaggaagttggccagaaggca
ataaatgcatctgcgaatatcacattggatggtgtggaagtactagggagaatggtcaga
tcaagaggaccaaatggaaactcagcaccattccagttacaaatgtttgatatcgtttgc
tctacatcatgggccagtaaagatagatgctgcgaacttcctggtctgcgagatgaagag
tcctgcccagaccttccacgatcctgctcttgctcagaaaccaatgaagtggctctagga
ccagctggccccccaggtggtccaggactccgaggaccaaaaggccaacaaggtgaacag
ggtccgaagggaccagagggacctcggggagaaacaggtcctgcaggaccccagggcccc
cctggaccccaaggacctagtggtctgtccattcaaggcatgcctggaatgccgggtgat
aaaggagataaaggagatgctggtcttcctggtccacagggtgtccctggaggtgttggt
tcaccaggccgtgatggctcaccaggccagaggggatttcccggaaaggacggttcctct
gggcctccaggaccacctgggccaattggcattcctggagcccctggtgtcccagggatc
acgggtagcatgggaccgcaaggagccctggggccacctggtgtccctggagcgaaagga
gagcgaggtgaacggggagacctgcagtctcaagccatggtgagggcggtggcacgtcaa
gtatgcgagcagctcattcagagtcacatggccaggtacacagccatcctcaaccagatc
cccagccagtcctcatctatccggaccatccagggccctcctggggagcccgggagacca
ggttcacctggaacccctggagaacaaggacccccaggtaccccaggcttcccaggaaat
gcaggagttccggggaccccaggagaacgaggtctaactggtgtcaaaggagagaaagga
aatccaggcattggaactcaaggcccaagaggtccccctgggccagcaggaccttcaggg
gaaagtcgtcctggcagtcctggtccacctggctctcctggaccaaggggtcccccgggc
cacctgggagtacctggacctcagggtccttctggccagcctgggtattgtgacccctct
tcatgctctgcttatggcgttggagtgtcccatcctgatcagcctgagttcacaccggtc
caggacgagcaggaggccatggatctgtggagtgcgggcatctga
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integrated database retrieval system
