Mus caroli (Ryukyu mouse): 110310614
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Entry
110310614 CDS
T05910
Symbol
Nelfcd
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110310614 (Nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110310614 (Nelfcd)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
110310614 (Nelfcd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
110310614
NCBI-ProteinID:
XP_021039344
Ensembl:
MGP_CAROLIEiJ_G0024758
UniProt:
A0A6P5R9V0
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Position
2:166390052..166401966
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AA seq
591 aa
AA seq
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MAGPAPGTIMGEDYFGNASEWGEEADSGQHQEDDSGEGEDDAEVQQECLHKFSTRDYIME
PSIFNTLKRYFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHL
KSLLIKHFDPRKADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLI
SDAGYQGEITSVSTACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYL
FAQAMMSVLAQEEQGGSAVRRVAQEVQRFAQEKGHDASQITLALGTAASYPRACQALGAM
LSRGALNPADITVLFKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGAKINQDHKHKYIHI
LAYAASVVETWKKNKRVSIGKDELKSTSKAIETVHNLCCNENKGASELVAELSTLYQCIR
FPVVAMGVLKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLVKLFET
EHSQLDVMEQLELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLDTDISLIRYFVTEVLD
VIAPPYTSDFVQLFLPILENDSIAGTIKAEGEHDPVTEFIAHCKSNFIVVN
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtccggcgccgggtacaattatgggagaagactacttcgggaatgcctcagag
tggggcgaagaggcggacagcggccagcatcaggaagatgattccggagaaggagaggac
gatgctgaggtgcagcaggaatgcctgcataagttttccacccgggactacatcatggag
ccctccatcttcaacactctgaagaggtatttccaggcaggagggtctccagaaaatgtc
atccagctcttatctgagaactacacggcagtggcccagacagtgaacctgctggctgag
tggctcattcagacaggtgttgagccagtgcaggtgcaggagaccgtggaaaaccacttg
aagagtttgctgatcaagcacttcgaccctcggaaagcagattctattttcactgaagaa
ggagagaccccagcttggcttgagcagatgatcgcacacacgacctggagagatctgttt
tataagttggccgaggcccatcctgactgtttgatgctcaacttcactgtgaagctcatt
tctgatgcggggtaccaaggggagatcaccagtgtgtccacagcctgccagcagttagaa
gtgttctccagagtgcttcggacctctctagccacaatcttggatgggggagaagaaaac
cttgagaaaaatctccctgagtttgcaaagatggtatgccatggcgagcacacgtacctg
tttgcacaggccatgatgtccgtgctggcacaggaggaacagggtggttctgcagtgcgc
agggtcgctcaggaagtccagcgcttcgcccaggagaagggccatgatgccagtcagatc
acgctggccttgggcacagctgcctcctacccccgtgcctgccaagcgcttggcgccatg
ctgtccagaggagccctgaatcctgcagacatcacggtcttgttcaagatgttcaccagc
atggaccctcctcctgtggaactcatccgggtgccagccttcctggacctgttcatgcag
tcgctcttcaagccaggggccaagatcaaccaggaccacaagcataagtacatccacatc
ctggcttacgctgccagtgtggttgagacctggaagaagaacaagcgggtcagcattggc
aaagacgagctcaagtccacgtcaaaggctatcgagactgtccacaacctgtgctgcaac
gagaacaaaggggcctctgagctggtggctgagctaagcacactttatcagtgcattcgg
tttccagtggtggcgatgggcgtgctcaagtgggtagattggaccgtatcggagccaagg
tacttccagctgcagactgatcatactccagttcacctggccttgttggatgagatcagc
acctgccaccagctcctgcacccccaggttctgcagctgcttgttaagctttttgagaca
gagcattcccagctagacgtgatggagcagctcgagttgaaaaagaccctgctggacagg
atggtgcacctgctgagccgcggctacgtccttccagtggtcagttatatccgcaaatgt
ctggagaagctggacacggacatctccctcatccgctactttgtcactgaggttctggat
gtcatcgcccctccgtacacctcagactttgtgcagcttttcctccccatcttggaaaat
gatagcatcgcaggcaccatcaaggcagagggcgagcatgaccccgtgacggagttcatt
gctcactgcaagtctaacttcatcgtggtgaactga
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