KEGG   Mus caroli (Ryukyu mouse): 110310614
Entry
110310614         CDS       T05910                                 
Symbol
Nelfcd
Name
(RefSeq) negative elongation factor C/D
  KO
K15181  negative elongation factor C/D
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110310614 (Nelfcd)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcal03021]
    110310614 (Nelfcd)
Transcription machinery [BR:mcal03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     110310614 (Nelfcd)
SSDB
Motif
Pfam: TH1
Other DBs
NCBI-GeneID: 110310614
NCBI-ProteinID: XP_021039344
Ensembl: MGP_CAROLIEiJ_G0024758
UniProt: A0A6P5R9V0
LinkDB
Position
2:166390052..166401966
AA seq 591 aa
MAGPAPGTIMGEDYFGNASEWGEEADSGQHQEDDSGEGEDDAEVQQECLHKFSTRDYIME
PSIFNTLKRYFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHL
KSLLIKHFDPRKADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLI
SDAGYQGEITSVSTACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYL
FAQAMMSVLAQEEQGGSAVRRVAQEVQRFAQEKGHDASQITLALGTAASYPRACQALGAM
LSRGALNPADITVLFKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGAKINQDHKHKYIHI
LAYAASVVETWKKNKRVSIGKDELKSTSKAIETVHNLCCNENKGASELVAELSTLYQCIR
FPVVAMGVLKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLVKLFET
EHSQLDVMEQLELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLDTDISLIRYFVTEVLD
VIAPPYTSDFVQLFLPILENDSIAGTIKAEGEHDPVTEFIAHCKSNFIVVN
NT seq 1776 nt   +upstreamnt  +downstreamnt
atggcgggtccggcgccgggtacaattatgggagaagactacttcgggaatgcctcagag
tggggcgaagaggcggacagcggccagcatcaggaagatgattccggagaaggagaggac
gatgctgaggtgcagcaggaatgcctgcataagttttccacccgggactacatcatggag
ccctccatcttcaacactctgaagaggtatttccaggcaggagggtctccagaaaatgtc
atccagctcttatctgagaactacacggcagtggcccagacagtgaacctgctggctgag
tggctcattcagacaggtgttgagccagtgcaggtgcaggagaccgtggaaaaccacttg
aagagtttgctgatcaagcacttcgaccctcggaaagcagattctattttcactgaagaa
ggagagaccccagcttggcttgagcagatgatcgcacacacgacctggagagatctgttt
tataagttggccgaggcccatcctgactgtttgatgctcaacttcactgtgaagctcatt
tctgatgcggggtaccaaggggagatcaccagtgtgtccacagcctgccagcagttagaa
gtgttctccagagtgcttcggacctctctagccacaatcttggatgggggagaagaaaac
cttgagaaaaatctccctgagtttgcaaagatggtatgccatggcgagcacacgtacctg
tttgcacaggccatgatgtccgtgctggcacaggaggaacagggtggttctgcagtgcgc
agggtcgctcaggaagtccagcgcttcgcccaggagaagggccatgatgccagtcagatc
acgctggccttgggcacagctgcctcctacccccgtgcctgccaagcgcttggcgccatg
ctgtccagaggagccctgaatcctgcagacatcacggtcttgttcaagatgttcaccagc
atggaccctcctcctgtggaactcatccgggtgccagccttcctggacctgttcatgcag
tcgctcttcaagccaggggccaagatcaaccaggaccacaagcataagtacatccacatc
ctggcttacgctgccagtgtggttgagacctggaagaagaacaagcgggtcagcattggc
aaagacgagctcaagtccacgtcaaaggctatcgagactgtccacaacctgtgctgcaac
gagaacaaaggggcctctgagctggtggctgagctaagcacactttatcagtgcattcgg
tttccagtggtggcgatgggcgtgctcaagtgggtagattggaccgtatcggagccaagg
tacttccagctgcagactgatcatactccagttcacctggccttgttggatgagatcagc
acctgccaccagctcctgcacccccaggttctgcagctgcttgttaagctttttgagaca
gagcattcccagctagacgtgatggagcagctcgagttgaaaaagaccctgctggacagg
atggtgcacctgctgagccgcggctacgtccttccagtggtcagttatatccgcaaatgt
ctggagaagctggacacggacatctccctcatccgctactttgtcactgaggttctggat
gtcatcgcccctccgtacacctcagactttgtgcagcttttcctccccatcttggaaaat
gatagcatcgcaggcaccatcaaggcagagggcgagcatgaccccgtgacggagttcatt
gctcactgcaagtctaacttcatcgtggtgaactga

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