Mus caroli (Ryukyu mouse): 110310723
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Entry
110310723 CDS
T05910
Symbol
Nphp1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcal03037
]
110310723 (Nphp1)
Cilium and associated proteins [BR:
mcal03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
110310723 (Nphp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_2
SH3_9
DUF6100
SH3_3
Motif
Other DBs
NCBI-GeneID:
110310723
NCBI-ProteinID:
XP_021039499
Ensembl:
MGP_CAROLIEiJ_G0024265
UniProt:
A0A6P5RA61
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Position
2:complement(120566141..120615783)
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AA seq
685 aa
AA seq
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MLARRPRDPLQALRRRGQELKLQVDSLVTESQLTGALEPSKRRDIYQRCIQLKQAVDENK
NTLQKLNKADEAAPVGNYEQRKEEEHSLLEKLACQLQELAVSISRKDALKVEAHSDKEED
DTTEDDEETEETGGEEEESEGDGDGKQEQASPKQAETETVTYIALGDFAAQQTGDLTFKK
GDILHIIEKKPDGWWLAKDAEGVEGLIPRTYLEPYNKEDKLESSEGSEEGGEEDVEVVDE
TADGAQVKQRTDSHWSAVRKAISEQINTVDVLATMGAIPAGFRPSTLSQLLDEAGNQFRA
SYFLQPELTTSQLAFRDLTWDAKAGTIMSRPSRVSLILTLWSCKMIPLPGTSIQVLSRHI
RLCLFDGSKVLSNIHTVRAVWQPKKPKTWTFSPQVTGILPCLLDGDCFIRSNSSTPDLGI
LFELGISYIRNSTGERGELSCGWVFLKLFDASGVPIPAKTYELFLNGGTPYEKGVEVDPS
VSRRAQGSVFRQMISMRRQPQLLVKLRSLNRRSRAMLSLLPETLVGSMCSAHLLIFYRQI
LGDVLLRDRTSLQSADLISHPVLATFPLLLEQPDVMDALRSSWAEKESTLKRAEKRDKEL
LKAEFLLVYHDCVLPLLHSTLLPPFRWAEEETEAARWKAIADFLKQSRENEGSLKALLSP
DGVHKPFDLSEQTYDFLGEIRKNSG
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcccggcggccgcgggacccgctgcaggcgctgaggcgccgcgggcaggagctg
aagctgcaggttgatagtttggtgactgaaagccaactaacaggtgctctggaaccaagt
aaaaggagagatatttaccaaagatgtatccagttaaaacaggcagtagatgaaaataaa
aacacccttcaaaaattaaacaaagctgatgaagctgcacctgtggggaactatgagcag
aggaaggaggaggaacacagccttctagagaagctagcctgccagctgcaggagcttgcc
gtgagcatcagcaggaaagacgctctcaaagttgaggcacacagtgacaaggaggaagat
gacacgactgaagatgatgaagaaactgaagaaactggtggagaggaagaagagtcagaa
ggggatggggacggaaagcaagaacaagcctccccgaaacaagcagaaacagaaactgtc
acatatattgctcttggggacttcgctgctcagcagactggggacttgacctttaagaaa
ggggacattctccatataattgaaaagaagcctgatggttggtggctggctaaggatgct
gaaggagttgagggtctcattcccaggacctacttggagccctataataaagaagacaag
ctggagtcaagtgaaggcagcgaggagggcggtgaggaggacgtggaggtagtggatgaa
actgcagatggagcccaggtgaagcagagaactgattcccactggagtgctgtgcgaaaa
gctatctcagagcagataaatactgttgatgtgttagccacgatgggagccattcctgca
ggattccggccttccacgctctcccagctgctggatgaagcagggaaccagtttcgagca
agttacttcttgcagccagagctcacgacatcgcagctggccttcagagatctaacatgg
gatgctaaggcaggcacgatcatgtcgagaccaagccgtgtttcattgattctgacccta
tggagctgtaaaatgatccctctcccaggaacaagcatacaggttctcagcagacacatc
cgcctctgcctgtttgacggcagcaaggtcctgagtaatatccatacagtccgagccgtg
tggcagcctaagaagccaaaaacatggaccttctctcctcaggtcactggcatcttgcca
tgcttgctcgatggtgactgttttatcaggtccaattcttcaactccagaccttgggata
ttatttgaacttggaatttcgtatattcgcaattcaactggtgagagaggagagttaagc
tgtggctgggtgtttcttaagcttttcgatgccagtggagttcctattccagcaaaaaca
tatgaactcttcttgaatggcggcactccttacgaaaaaggtgttgaagtggacccttca
gtgtccagaagagcacagggcagtgttttccgtcagatgataagcatgcgcaggcagcct
caacttctggtgaaacttcggtctctgaacaggaggtccagggccatgctcagtctgctg
ccagaaaccctggtggggagtatgtgctctgctcacttactgatattttaccgacaaatt
cttggagatgtgctcctgagagataggacaagcctgcaaagtgccgatttaatcagtcat
cccgtgctggccaccttccctctgctcctggagcagcccgacgtgatggatgctctcagg
agttcctgggctgagaaagaaagcacactaaagcgagcagagaagagagacaaagagctc
ctaaaggccgagttcctcctggtctaccatgactgtgtgctccctcttctgcactcaaca
ctgctgcccccctttaggtgggctgaggaagagacagaggctgcaagatggaaagccatt
gctgacttcctcaagcagagccgggagaacgagggttccctgaaggctctgctgtcacca
gatggagttcacaaaccatttgacctttcagagcagacctatgacttcttgggtgaaata
agaaagaactcaggctaa
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