KEGG   Mus caroli (Ryukyu mouse): 110311143
Entry
110311143         CDS       T05910                                 
Symbol
Polr2h
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC3
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03020  RNA polymerase
mcal03420  Nucleotide excision repair
mcal04623  Cytosolic DNA-sensing pathway
mcal05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110311143 (Polr2h)
  09124 Replication and repair
   03420 Nucleotide excision repair
    110311143 (Polr2h)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    110311143 (Polr2h)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    110311143 (Polr2h)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcal03021]
    110311143 (Polr2h)
   03400 DNA repair and recombination proteins [BR:mcal03400]
    110311143 (Polr2h)
Transcription machinery [BR:mcal03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     110311143 (Polr2h)
  RNA polymerase III system
   RNA polymerase III
     110311143 (Polr2h)
  RNA polymerase I system
   RNA polymerase I
     110311143 (Polr2h)
DNA repair and recombination proteins [BR:mcal03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110311143 (Polr2h)
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 110311143
NCBI-ProteinID: XP_021040034
Ensembl: MGP_CAROLIEiJ_G0020589
UniProt: A0A6P5R8C0
LinkDB
Position
16:17877595..17883112
AA seq 150 aa
MAGILFEDIFDVKDIDPEGKKFDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLVI
ASTLYEDGTLDDGEYNPTDDRPSRADQFEYVMYGKVYRIEGDETSTEAATRLSAYVSYGG
LLMRLQGDANNLHGFEVDSRVYLLMKKLAF
NT seq 453 nt   +upstreamnt  +downstreamnt
atggcgggcatcctgttcgaggatattttcgatgtgaaagacatcgacccagaaggcaag
aaatttgaccgagtatcccggctgcactgtgagagtgaatctttcaagatggacctcatc
ttagatgtaaacattcagatttaccctgtggacttaggtgacaagttccggttggttata
gctagtactttgtatgaagatggtaccttggatgatggtgaatacaaccccacagatgac
aggccttccagggctgaccagtttgagtatgtcatgtatgggaaagtgtacaggattgaa
ggggatgagacctcgactgaagcagccacacgcctctctgcatacgtgtcctatgggggc
ctgctcatgaggcttcagggtgatgccaacaacctacatggatttgaggtggactccaga
gtttatctgctgatgaagaagctggcgttctga

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