Mus caroli (Ryukyu mouse): 110311159
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Entry
110311159 CDS
T05910
Symbol
Mgrn1
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04120
Ubiquitin mediated proteolysis
mcal04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110311159 (Mgrn1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
110311159 (Mgrn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110311159 (Mgrn1)
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110311159 (Mgrn1)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110311159 (Mgrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
110311159
NCBI-ProteinID:
XP_021040054
Ensembl:
MGP_CAROLIEiJ_G0020412
UniProt:
A0A6P5RBD0
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All DBs
Position
16:1140577..1193026
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AA seq
579 aa
AA seq
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MGSILSRRIAGVEDIDIQANSAYRYPPKSAGNYFASHFFMGGEKFDTPHPEGYLFGENMD
LNFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGEKPRVFYS
LEFTFDADARVAITIYCQAVEELVNGMAVYSCKNPSLQSETVHYKRGVSQQFSLPSFKID
FSEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQ
KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLC
TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPISFSPVLAQSVDHDEHSCPFK
KSKSHPASLVSKKPKRETSSDSIPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI
SDGLSQASCPLAGLDRIMESGLQKGKTQSKSPDSTLRSPSSPIHEEDEEKLSEDSDAPLP
PSGVELVLRESSSPESFGTEEGDEPSLKQGSRVPSIDDVLQDGSPQHHGCSQPVPPADIY
LPGWSTSMETPHSLGTTSSPWPLLSGSSPEPGAAELTPF
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgggctccatcctgagtcgccgcatcgcgggcgtagaggacatcgacatacaggccaac
tcggcctatcgctaccctccgaagtccgcaggaaactactttgcttcgcattttttcatg
ggaggagagaaatttgacactccccatcctgaaggttacctctttggagagaatatggac
ctgaacttcctaggcagtcgtccagtccagtttccctatgtcactcctgccccccatgag
ccagtgaagacactgaggagcctggtaaacattcgcaaagactctctccggcttgtgagg
tacaaagatgacgcagacagccccacggaggacggtgaaaagccccgggtgttctacagt
ctggaattcacctttgatgccgatgcccgtgtggctatcaccatttattgtcaggcagta
gaggagctggtgaacggcatggcagtgtacagctgtaagaacccttctctgcaatctgag
accgtccactacaagagaggcgttagccagcagttctccctgccttctttcaagattgac
ttctccgagtggaaggatgatgagctgaactttgacctggaccggggtgtgtttccagta
gtcatccaggctgtggtggacgaaggggatgttgtggaagtgactggccatgctcatgtg
ctcctcgctgcctttgagaagcatgtggatggcagcttctccgtgaagccattaaagcag
aagcaaattgtggaccgggtcagctacctgctgcaggagatctacggcatcgagaacaag
aacaaccaggagactaagccttctgatgatgagaacagtgacaacagcagtgagtgtgtg
gtgtgcctgtcagacctgcgggacacactgatcctaccctgccgccacctgtgcctctgc
acttcctgtgctgacacactgcggtaccaggccaacaactgccccatctgccggctgcca
ttccgagccctcctgcagatccgggctgtgcggaagaagccaggggccctgtctcccatc
tccttcagccctgtcttggcccaaagtgtggaccacgatgagcactcttgtccctttaaa
aaatcaaagtcgcaccctgcctccctggtcagcaagaaacctaaaagggaaacaagttct
gacagtatcccacctggctatgaacccatctccttgctcgaggcactcaatggtctacgg
gctgtctccccggctatcccatcagctcccctctatgaggaaatcacctactcaggcatc
tcggacggtctttcccaggccagttgtccccttgctggacttgatcgaatcatggaaagt
ggcctacagaagggcaagacacagagcaagtctccagacagcaccctgcggtctccatca
tcccccatccatgaggaggacgaggagaagctctcagaggactcggatgctcctctccca
ccaagcggtgtggagctggtactgcgggagagcagctcccctgagagtttcggaacagag
gagggggatgagccatccctaaagcaagggagccgagtaccctctattgatgatgtcctg
caagatggcagtccacagcatcatggttgcagccagccagtccctcctgctgacatctac
ctaccaggatggtccacctccatggagacgccacacagccttggcaccaccagctccccc
tggcctctgctgagtggctctagtcctgagcctggagctgctgagctgaccccattctga
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