Mus caroli (Ryukyu mouse): 110311265
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Entry
110311265 CDS
T05910
Symbol
Gabpa
Name
(RefSeq) GA-binding protein alpha chain isoform X2
KO
K09441
GA-binding protein transcription factor, alpha
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110311265 (Gabpa)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
110311265 (Gabpa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ets
GABP-alpha
SAM_PNT
AAA_25
Motif
Other DBs
NCBI-GeneID:
110311265
NCBI-ProteinID:
XP_021040183
Ensembl:
MGP_CAROLIEiJ_G0020891
UniProt:
A0A6P5R8P5
LinkDB
All DBs
Position
16:79471442..79498423
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AA seq
454 aa
AA seq
DB search
MTKREAEELIEIEIDGTEKAECTEESIVEQTYTPAECVSQAIDINEPIGNLKKLLEPRLQ
CSLDAHEICLQDIQLDPDRSLFDQGVKTDGTVQLSVQVISYQGIEPKLNILEIVKTAETV
EVVIDPDAHHAEAEAHLVEEAQVITLDGTKHITAISDETSEQVTRWAAALEGYRKEQERL
GIPYDPIHWSTDQVLHWVVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQRVPRGEIL
WSHLELLRKYVLASQEQQMNEIVTIDQPVQIIPASVPPATPTTIKVINSSAKAAKVQRSP
RISGEDRSSPGNRTGNNGQIQLWQFLLELLTXKDARDCISWVGDEGEFKLNQPELVAQKW
GQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAELNRLVIE
CEQKKLARMQLHGIAQPVTAVALAATSLQADKEI
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgactaagagagaagcagaagaactgatagaaattgagatcgatgggactgagaaagca
gagtgcacagaagaaagcattgtggaacaaacctataccccagctgaatgtgtcagccag
gccatagacatcaatgaaccaataggcaatttaaagaaactactagaaccaagactgcag
tgttctttggatgctcatgaaatttgcctgcaagatattcagctggatccagaccgaagc
ttatttgatcaaggagtgaaaacagatgggactgtacagcttagtgtacaggtaatttct
taccaaggaatcgagccaaagttgaacattcttgaaattgttaagactgcggaaacagtc
gaagtggtcattgatccagatgcccaccatgcagaagcagaagcgcatctcgttgaagaa
gcccaggtgataactcttgatggcaccaagcatatcacagccatttcagatgagacctcg
gagcaggtgacgagatgggctgctgcactagaaggctacagaaaagagcaggagcgcctt
ggcatcccctatgatcctatacactggtccacagaccaagtcctgcattgggtggtttgg
gttatgaaggagttcagcatgactgatatagacctcaccacactcaacatttcgggaaga
gaattatgtagtctcaaccaagaagatttttttcagcgggtccctcggggagaaattctt
tggagtcatctggagcttcttcgaaaatatgttttggcaagccaagagcaacagatgaat
gagatagttacaattgaccagcctgtgcagattattccagcctcagtgcctcccgctaca
ccgactacgattaaagttataaacagcagtgcaaaggcagctaaagtgcaacggtcccca
aggatttcaggagaagacagaagttcaccggggaacagaacaggaaacaatggtcagatc
caactatggcagtttttgctagaacttcttactnacaaggatgctcgagactgtatttct
tgggttggtgatgaaggtgaatttaagctaaatcagcctgagttggttgcgcagaaatgg
ggacaacgtaagaacaagcctaccatgaactatgagaaacttagccgtgcattacggtat
tattatgatggggacatgatttgtaaagttcaaggcaagagatttgtgtacaaatttgtt
tgtgacttgaagactcttattggatacagtgcagcagaactgaaccgcctggtcatagag
tgtgaacagaagaaactggcacggatgcagctgcatgggattgcccagccagtcacggca
gtagccctggcagccacctctctacaggcagacaaagagatttga
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