Mus caroli (Ryukyu mouse): 110311278
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Entry
110311278 CDS
T05910
Symbol
Map1a
Name
(RefSeq) microtubule-associated protein 1A isoform X1
KO
K10429
microtubule-associated protein 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110311278 (Map1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mcal01009
]
110311278 (Map1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcal04812
]
110311278 (Map1a)
Protein phosphatases and associated proteins [BR:
mcal01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110311278 (Map1a)
Cytoskeleton proteins [BR:
mcal04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
110311278 (Map1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAPB1_N
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-GeneID:
110311278
NCBI-ProteinID:
XP_021040205
Ensembl:
MGP_CAROLIEiJ_G0024187
UniProt:
A0A6P5RBR7
LinkDB
All DBs
Position
2:114145714..114166999
Genome browser
AA seq
3023 aa
AA seq
DB search
MATEAGTAGPGSVAMETTPELGLQSLGAPPAQNPAEPLCEAGAAVAAARWDLRKYSLLIV
IGDIGTESQLRAVRAHLEQGILSWNIDLSSFDLNQQLRLFITRHLAHFSSEVKGQRTLCH
QSETLETIILVNPTADSISSEVHHLLSSPSAHKLLILSGQTLEPEGDLILQSGTYSYQNF
AQVLHKPEIAQLLSNRDPGIQAFLTVSCLGEGDWSHLGLSSSQEALRLRLNPEPVLPTMD
GVAEFSEYVSETVDVPSPFDLLEPPTSGGFLKLSKPCCYIFPGGRGDSALFAVNGFNILV
DGGSDRKSCFWKLVRHLDRIDSVLLTHIGADNLPGINGLLQRKVAELEEEQSQGSSSYSD
WVKNLISPELGVVFFNVPDKLRLPDASRKAKRSIEEACLTLQHLNRLGIQAEPLYRVVSN
TIEPLTLFHKMGVGRLDMYVLNPVKDSKEMQFLMQKWAGNSKAKTGIVLANGKEAEISVP
YLTSITALVVWLPANPTEKIVRVLFPGNAPQNKILEGLEKLRHLDFLRYPVATQKDLAAG
AVPANLKPSKIKHRADSKESLKAAPKTAMSKLAKREEVLEEGAKEARSELAKELAKSEKK
AKEPSEKPPEKPSKPERVRTESSEALKAEKRKLIKDKVGKKHLKEKISKLEEKRDKEKKE
IKKERKELKKEEGRKEEKKDAKKDEKRKDTKPELKKFSKPDLKPFTPEVRKTLYKAKAPG
RIKVDKGRAARGEKELSSEPRTPPAQKGAAPPPAASGHRELALSSPEDLTQDFEELKREE
RGLLAEPRDMELGEKPLPADASEQGRPSTAIQVTQPSASVLEQEQVEREKEVVPDFPEDK
GSKNRAPDSGAEVEREKETWEERKPREAELSPENIAAAREESEPEVKEDVIEKAELEEME
EIHPSDEEEEETKAESFYQKHMQEALKVIPKGREALGGRELGFQGKVPEKETASFLSSLA
TPAGAAEHVSYIQDETIPGYSETEQTISDEEIHDEPEERPAPPRFSTSTYDLSGPEGPGP
FEASQSAESAVPATSSKTYGAPETELTYPPNMVAAPLAEEEHVSSATSITECDKLSSFAT
SVAEDQSVASLTAPQTEETGKSSLLLDTVTSIPSSRTEATQGLDYVPSAGTISPTSSLEE
DKGFKSPPCEDFSVTGESEKKGESVGRGLTGEKAVGKEEKNVTASEKLSSQYAAVFGAPG
HALHPGESALGEVEERCLSPDDSTVKMASPPPSGPPSAAHTPFHQSPVEEKSEPQDFQED
SWGDTKHTTGVSKEDAEEQAAKPGPEEAMSEEGKEPLSRSPQAQDTLGSLVGGQTGCTIQ
LLPEQDKAVVFETGEAGAASGAGSLPGEVTTALQEPVEPQKDELLGFTDQSFSPEDAESL
SVLSVVSPDTAKQEATPRSPCTPKEQQLHKDLWPMVSPEDTQSLSFSEESPSKETSLDIS
SKQLSPESLGTLQFGELSLGKEEKGPLVKAEDNSCRLAPVSIPEPHTATVSPPTDEAAGE
AGLTDESPAGNLPGSSFSHSALSGDRKHSPGEITGPSGHFMTTDSSLTKSPESLSSPAME
DLAMEWGGKAPGSEDRASEQKEEELERKSETLQQKDQILPEKAAVVHRDSVMHQKDEALD
EENKPGGQQDKTSEQKGRDLDKKDTAAELGKGPETKGKDLDLEDQGLAEKDKASEQRGAA
LQQTQATEPRARAQEHRDLEQKDEHLELRDKTPEEKDKVLVLEDRAPEHIIPQPTQTDRA
PEYRSKVDKEQKDEASEEKEQVLEQKDWARGKEGTALDQDNRAAGQKDGTLKEDKTQGQK
SSFLEDKSTTPKEMTLDQKSPEKAKGVEQQDGAVPEKTRALGLEESPEEEGKAREQEEKY
WKEQDVVQGWRETSPTRGEPVGGQKEPVPAWEGKSPEQEVRYWRDRDITLQQDAYWKELS
CERKVWFPHELDGQGAHPRYSEERESTFLDEGPNEQEITPLQHTPRSPWASDFKDFQEPL
PQKGLEVERWLAESPVGLPPEEEDKLSRSPFEIISPPASPPEMTGQRVPSAPGQESPVPD
TKSTPPTRNEPTTPSWLAEIPPWVPKDRPLPPAPLSPAPAPPTPASDPHAPVPFSWGIAE
YDSVVAAVQEGAAELEGGPYSPLGKDYRKAEGEREGEGGAGAPDSSSFSSKGPEVVESHT
SRETEQTEPEQREPTPYPDERSFQYADIYEQMLLTGSGPACPTREPPLGASGDWPPHLST
KEEAAGRNKSAEKELSSPVSPPNHQSDTPTFSYASLAGPTIPPRQEPEPGPNVEPSFTPP
AVPPRAPISLSQDPSPPLNGSTTSCSPDRRTPSPKEAGRSHWDDGTNDSDLEKGAREQPE
KETQSPSPHHPMPVGHPSLWPETEAHSSLSSDSHLGPVRPSLDFPASAFGFSSLQPAPPQ
LPSPAEPRSAPCGSLAFSGDRALALVPGTPTRTRHDEYLEVTKAPSLDSSLPQLPSPSSP
GAPLLSNLPRPASPALSEGSSSEATTPVISSVAERFPPGLEVAEQSSGELGPGNEPAAHS
LWDLTPLSPAPLASRDLAPAPAPAPAPSLPGNLGDSTLPCRPECSGELTKKPSPFLSHSG
DHEANGPGETSLNPPGFATATAEKEEAEALHAWERGSWPEGAERSSRPDTLLSSEQRPGK
SSGGPPCSLSSEVEAGPQGCATDPRPHCGELSPSFLNPPLPPPTDDSDLSTEEARLAGKG
GRRRAGRPGATGGPCPMADETPPTSASDSGSSQSDSDVPPETEECPSITAEAALDSDEDG
DFLPVDKAGGVSGTHHPRPGHDPPPAPLPDPRPPPPRPDVCMADPEGLSSESGRVERLRE
KVQGRPGRKAPGRAKPASPARRLDIRGKRSPTPGKGPVDRTSRALPRPRSTPSQVTLEEK
DGHSPMSKGLVNGLKAGSTALGSKGSSGPPVYVDLAYIPNHCSGKTADQDFFRRVRASYY
VVSGNDPANGEPSRAVLDALLEGKAQWGENLQVTLIPTHDTEVTREWYQQTHEQQQQLNV
LVLASSSTVVMQDESFPACKIEF
NT seq
9072 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgaagccgggaccgcggggcctggcagcgttgccatggagacaactccggag
ctggggctccagagcctcggtgcaccgccggctcagaacccggcggagcctctttgcgag
gccggtgccgcggtagcggcagcgcgctgggacctgcggaaatactccttgctcatcgtg
atcggcgatatcggtacagagagtcagctgagggccgtgcgggcccaccttgaacaaggg
attctctcctggaatattgacttatcatcctttgacttgaaccaacagttgagactcttc
attacccggcacctagctcacttctcctcagaggtcaaaggccagaggaccctctgccac
cagagtgagaccctcgagaccatcatcctagtcaaccccaccgcagacagcatcagctca
gaggttcaccatcttcttagtagcccatcagctcacaaactcctcatcttgagtggacaa
actttagaacctgagggagaccttatcctacagagtggtacctactcatatcaaaacttc
gcccaggttcttcacaaacctgagattgcccagttgcttagcaatagagaccctgggatc
caggccttcctcactgtttcctgcttaggggagggtgactggagccacctgggactgtct
agttcccaagaggccttgcgcctccggctaaaccctgagcctgtgctgcccaccatggat
ggagtggccgagttctcagagtatgtctcggagactgtggatgtgccgtccccctttgac
ctgcttgagccccccacctcaggaggcttcctcaagctctccaagccttgctgctacatc
ttccctggtggccgtggggactctgctctctttgctgtcaatggctttaacatcctggtg
gacggcggttctgatcgcaagtcctgcttctggaagctggtgcgacacctggaccgcatc
gactcggtgctgctcacgcacattggggctgacaatctgccaggcatcaacgggctcctg
cagcgcaaggtggcagagctagaggaggagcagtcccagggctccagcagctacagcgac
tgggtgaagaacctcatctcccctgagctcggagtcgtgttcttcaatgtgcctgataag
ctccggctgcccgatgcctcccgcaaggccaagcgcagcatcgaggaggcctgtctcacc
cttcagcacctgaaccgtctcggcatccaagccgagcctctgtaccgggtggtcagcaac
accatcgagccgctgaccctcttccacaaaatgggtgtggggaggctggacatgtatgtc
ctcaaccctgtcaaggacagtaaggagatgcagttcctcatgcagaagtgggcaggcaac
agtaaagccaagacaggcatagtgctggccaatgggaaggaggcagagatctccgtcccc
tacctgacctccatcactgccctggtggtatggctcccagccaaccctactgagaagatt
gtgcgtgtgcttttcccgggaaatgctccccagaacaagatcttggagggcctggaaaag
ctgcggcacctggacttcctgcgctatcctgtggcgacacagaaggacctggctgctggg
gccgtgcctgccaacttgaaacccagcaaaatcaagcatcgggccgacagcaaggagagc
ctcaaagctgcccccaagacagcaatgagcaagctggccaaacgggaggaggtgttagaa
gagggagccaaggaggcccgctcagagctggccaaggagttagccaagtcggaaaagaaa
gcaaaagagccgtccgagaagcccccagaaaaaccctccaagccagagagggtgaggaca
gagtccagcgaagcactgaaggctgagaagcggaagctgatcaaggataaagtgggcaag
aagcacctgaaggaaaagatttcaaagctggaggagaagagggacaaggagaagaaggag
atcaagaaggaaaggaaggaactcaagaaggaggagggaaggaaggaggagaaaaaggac
gctaagaaggacgaaaagaggaaagataccaaaccggaactcaagaaattctctaaacca
gacctgaagccttttacccctgaggtccgtaagaccctctacaaagccaaggcccctgga
aggatcaaggtggacaaaggccgagctgcccgtggggaaaaggagttgtcttctgagccc
cggacacccccagcccagaagggggctgcaccgcctcctgctgccagtgggcacagagag
ttggccttgtcctcaccagaggacctcacacaggactttgaggagttgaagcgtgaggag
agaggtttgttggctgaaccaagggacatggaactgggtgagaaaccgctccctgcagat
gcctccgagcagggacgcccaagcacagccatccaggtgacccaaccctctgcttcagtg
ctggagcaagaacaggtagaaagggagaaagaggttgtcccagactttccggaggataaa
gggagcaagaacagagccccagactcaggtgctgaggtagagagagagaaagaaacctgg
gaggaaaggaagccgagagaagcagagctgagcccagagaacattgctgcggccagggag
gagagtgaacctgaggtaaaggaggatgtgatagaaaaggctgagttagaggagatggag
gagattcatccctcagatgaggaagaggaagagacaaaggctgagagtttttatcaaaaa
catatgcaggaagccttaaaggtaatcccaaaaggcagagaggctcttggcggccgggaa
ctgggatttcagggcaaggtgcctgaaaaggagacagcatccttcctgagcagcttggcc
acacctgcgggagccgctgagcatgtctcctacattcaggatgagacgatccctggctac
tcagagactgagcagactatctcagatgaggagatccacgacgagccggaagaacgccca
gccccaccccgattctccacgagtacctatgacctctctgggcctgaaggtcctggtccc
tttgaagccagccagtctgcagagagtgctgttccagccacctcgagcaaaacttatggg
gcacctgagactgaactcacctaccctcccaacatggtcgctgcccctctggctgaagag
gaacatgtgtcctcagccacgtcaatcacggagtgtgacaaactctcttcctttgccaca
tcggtggctgaggaccaatctgtggcttcactcacagctccccagacggaggagacaggc
aagagctccctgttgctcgacaccgtcacaagtattccctcttcccgcactgaagccact
cagggcttggactatgtgccgtcagcaggcaccatctcacccacctcttccctggaagaa
gacaagggcttcaagtcaccgccctgtgaggatttctctgtgaccggggagtcggagaag
aaaggagagtctgtggggagaggtttgaccggggagaaggctgtagggaaggaagaaaag
aatgtaacagcgtctgagaaactgtccagtcagtatgctgccgtgtttggtgcccctgga
catgccctacatccgggggaatcggccctcggagaagtggaggaacggtgcctcagccca
gatgatagcaccgtgaagatggcttctcctccaccatctggcccacccagtgctgcccac
acgccctttcatcagtcccccgtggaagaaaagtctgagcctcaagacttccaagaagat
tcctggggagacacaaagcacaccactggtgtgagcaaggaagatgctgaagagcaggca
gctaagccagggcctgaggaggccatgtcagaagagggcaaagaacctctttccaggagc
ccccaagcccaggacacacttgggagccttgttgggggtcagactggctgtactattcaa
ctgttgccagaacaagacaaagcagtggtgtttgagactggagaggcaggggcagcttca
ggagcaggcagccttcctggagaagtgacgacagcacttcaggaacccgtggaacctcag
aaagatgagctacttgggtttactgatcaaagcttttcccctgaagatgcagagtccctg
tctgtcctcagtgtggtctccccagacactgccaaacaagaggccacccccaggtctccc
tgtaccccgaaagagcagcagctacacaaagacctttggccaatggtgtccccagaagac
acccagtcactttctttctcagaagagagtcctagcaaggagacctctctggatatctct
tctaagcagctctctccagaaagccttggcaccctccagtttggagaactaagcctagga
aaggaagaaaaggggcctctggtgaaggcggaagacaactcttgccgcctagctcctgtg
tctattccagagccccacacagccacagtgtcacctcccacagatgaggctgctggagag
gcaggtctcacagatgagagccctgctggaaatttacctggcagctctttctctcactct
gcactgtcaggcgacaggaaacactcacctggggagatcacgggccccagtggacacttt
atgacaactgatagctccctcaccaagagtcccgagtctttgtcaagtcccgccatggag
gacctggccatggagtgggggggtaaagctccggggtcggaagacagagccagtgaacag
aaggaggaggaactcgagcgaaagagtgaaaccctacagcagaaggaccagattttgccg
gagaaggctgctgttgtccatcgggactcagtcatgcatcagaaggacgaggctctagat
gaagagaacaagcctggaggacagcaggataagacttcagaacagaaaggcagagacttg
gacaaaaaagacacggctgcagagctgggcaaaggcccagaaaccaaaggcaaagactta
gatctagaggaccagggcctggcagagaaggacaaggcctcagaacaaaggggtgcagcc
ctgcaacagacccaggccactgaaccaagagccagagcacaagagcacagagatttagaa
caaaaggacgagcatttagagctgagagataagactcctgaagagaaagataaagtgtta
gtactggaagacagggctccagagcacatcatcccccaaccaacacagacagacagagct
ccagaatacagaagcaaggttgataaagaacagaaggatgaggcctcggaagagaaagaa
caggttttagaacaaaaagactgggcccgaggaaaagagggtactgccttggaccaagac
aacagggctgccggacagaaagatgggaccctaaaagaagacaaaactcaggggcagaag
agctctttcctggaagataaaagtacaacaccaaaagagatgacccttgaccaaaagtct
ccagaaaaggccaaaggtgtggagcagcaggatggagctgtcccggagaagaccagagct
ttggggctggaagagagcccagaagaggagggcaaggctcgagagcaggaagagaaatac
tggaaggagcaggatgtggtccagggatggcgagaaacatctccaaccagaggagagcca
gtgggaggccagaaagagcctgttccagcctgggagggcaagtctcctgagcaggaagtc
aggtattggagggacagagacataaccctacagcaggatgcgtactggaaggagctaagc
tgtgagaggaaggtctggttcccccatgagctagatggccaaggagcccatccacggtac
tctgaggaacgtgaaagtacgtttcttgatgaggggccaaatgaacaagaaataacccca
ctgcagcacactccccggagtccctgggcctcggatttcaaggatttccaggagcccctg
ccacagaaggggctggaagtagagcgctggcttgctgagtcgccagttggcttgccacca
gaggaggaggacaaactgtctcgctctccctttgagatcatctcccctccagcatcccca
cctgagatgactggacagagggttccctcagctccaggacaggaaagccctgttccagac
actaagtccacaccacccacgaggaatgaacctaccaccccatcatggctagctgagatc
ccaccatgggtacctaaggacaggcccctgcctcctgcacccctctctccagctccagct
cccccgacaccggcctcagacccacatgctcctgtgcccttctcctggggcatcgctgaa
tatgacagtgtggtggctgcggtgcaggagggggcagccgagttggaaggtggcccatac
tcccccctagggaaggactatcgcaaagctgaaggggaaagggaaggagagggtggggct
ggagctcctgacagcagctccttcagttcaaagggcccagaggttgtggagagtcacacc
tccagggagactgaacagactgagccagagcagagggagcccacaccctatcccgacgag
aggagctttcagtatgcagacatctacgaacagatgctgcttactgggtcgggccctgct
tgccccaccagggagcctccactgggggcatctggggattggcccccacacctctcaacc
aaggaggaggctgctggccgcaataagtctgcagagaaggagctttcatcccctgtgtcg
cccccaaaccaccaatctgacactccaacgtttagctatgcatctctggcaggacccact
atacctcccaggcaagaaccggagccagggcccaatgtggagcccagcttcacccctcct
gcagtgccccctcgtgcccctatctccctgagccaagacccaagtccccctcttaatgga
agcactacgagctgtagcccagacaggaggaccccatccccaaaggaagcaggccgaagt
cactgggatgatggtactaatgactcagacctggagaagggggctcgggaacagcccgag
aaagagacccagtccccaagtccccatcaccccatgcctgtgggccacccttcactgtgg
cctgaaactgaggcgcatagcagcctttcctcagactctcacctaggacctgtccgacca
agtctggacttccctgcttcagcctttggcttctcctccttgcagcctgctccccctcag
ctgccctctccggctgaaccccgctccgcaccctgtggctctcttgccttctctggggac
cgagctctggccctggttccaggaactccaaccagaacccgacatgatgagtacctggaa
gtgaccaaggcacccagcctggattcctcactgccccaactcccatcacccagctcgccg
ggggcccctcttctctccaatctaccccgacctgcctcgccagccttgtctgaagggtcc
tcttctgaggctaccacgcctgtgatttcaagtgtggctgaacgcttccctccaggtcta
gaggtggctgaacagagttcaggagaattgggcccaggaaacgagccagctgcccacagc
ctctgggacctcactcctctgagcccagcccccttagcttcccgggacctggctccagct
ccagctccagctccagctccaagcctgcctggaaacttgggtgacagtaccctgccttgc
cgcccggagtgctcaggggaactcaccaagaagccaagccccttcctgagccactctgga
gatcatgaagccaatggcccaggagaaaccagccttaatcccccagggtttgccacagcc
acagcagaaaaagaagaggctgaagcccttcatgcttgggaacgagggtcctggcccgag
ggagcggagaggagctcccggccggatacacttctctcatcagagcagcgtcctggaaag
agctccgggggtccaccctgcagtctttcttctgaagttgaggctggacctcagggatgt
gctacagacccccgcccccactgcggggagctttccccctcattcctgaaccctcctctg
cccccacccacagatgacagtgacctttcaacggaagaagctcggctggcaggaaaagga
gggcggcgccgggcagggaggccaggggccacaggaggtccatgccctatggctgatgag
acaccccccacatcagccagcgactcaggctcctcacaatcagattctgatgtcccacca
gaaactgaggagtgtccatccatcacagctgaggcagcccttgactcagatgaagatggg
gacttcttgcctgtggacaaagctgggggagttagtggaactcaccaccccagacctggc
catgacccacccccagcccccctaccagacccccgcccaccccctccccgaccggatgtt
tgcatggctgaccccgaggggctcagctcagagtctgggagagttgagagactacgggaa
aaggtgcagggacgacctggccgtaaggcccctggccgggccaagcctgcatctcctgct
cgacgtctggatattcggggaaaacggtcacctactcctggcaaagggcctgtagatcga
acatcccgggccctaccccgaccacggagcaccccaagccaggtcaccttagaagaaaag
gatggtcacagccccatgtctaaaggcttagtcaatggcctcaaggcaggatccacagcc
ttggggtccaagggtagctctggccctcctgtgtatgtggatcttgcctatatcccaaat
cactgcagcggcaagactgctgatcaggacttcttccgccgagtgcgtgcatcctactat
gtggtcagtggaaatgaccctgccaatggggagccaagccgggctgtgctggatgccctg
ctggaaggcaaggcccaatggggggagaaccttcaggtgactctgattcccactcatgac
acggaggtgactcgtgagtggtatcagcagacacacgagcaacagcagcaactgaacgtc
ctggtcctggctagcagcagcactgtggtgatgcaggacgagtcctttccagcctgcaag
attgagttctga
DBGET
integrated database retrieval system
