Mus caroli (Ryukyu mouse): 110311426
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Entry
110311426 CDS
T05910
Symbol
Snx4
Name
(RefSeq) sorting nexin-4
KO
K17919
sorting nexin-4
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110311426 (Snx4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110311426 (Snx4)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mcal04990
]
110311426 (Snx4)
Membrane trafficking [BR:
mcal04131
]
SNARE
SNARE associated proteins
Others
110311426 (Snx4)
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
110311426 (Snx4)
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
110311426 (Snx4)
Domain-containing proteins not elsewhere classified [BR:
mcal04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
110311426 (Snx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
110311426
NCBI-ProteinID:
XP_021040386
Ensembl:
MGP_CAROLIEiJ_G0020688
UniProt:
A0A6P5R6M0
LinkDB
All DBs
Position
16:30274504..30322653
Genome browser
AA seq
450 aa
AA seq
DB search
MEQAPPDPEKLLQPGPLEPLGGPGAVLEAVVGEENEGTREDGSGVDTMTGNNFWLKKIEI
SVSEAEKRTGRNAVNMQETYTAYLIETRSVEHADGQSVLTDSLWRRYSEFELLRNYLLVY
YPHVVVPPLPEKRAEFVWHKLSADNMDPDFVERRRVGLENFLLRVASHPVLCRDKIFYSF
LTQEGNWKETVNETGFQLKADSRLKALNATFRVRNPDKRFTELRHYSDELQSVISHLLRV
RARVADRLYGVYKVHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDVYASSIDDILEDEEHY
ADQLKEYLFYAEALRAVCRKHELMQYDLETAAQDLAAKKQQCEELATGTVRTFSLKGMTT
KLFGQETPEQREARIKVLEEQINEGEQQLKSKNLEGREFVKNAWADIERFKEQKNRDLKE
ALISYAVMQISMCKKGIQVWTNAKECFSKM
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggcacctccggaccccgagaagctcttgcagcctggacccctggagccgctg
ggtggccctggcgctgtgctggaggccgtggtcggtgaggagaacgagggcacccgggaa
gacggctcaggggtcgacacgatgacgggaaataatttttggttgaagaaaatagaaatc
agtgtttcagaagcagagaagagaactggaaggaacgccgtgaacatgcaagaaacgtac
actgcctacctcatcgagacgcggtcagttgagcatgccgatggtcagagtgtgctcaca
gactcgctgtggaggcggtacagtgagttcgagttgttgagaaactaccttctagtatac
tatccacatgttgttgtgccacctctcccagaaaaacgggcagagttcgtgtggcataaa
ctctctgctgacaacatggacccagactttgtggagagacgacgcgtgggcttagaaaac
ttcctcttgagggtggcttcacatcctgtcctttgtagagacaaaatcttctattcattt
ttaacccaggaaggtaactggaaggagactgtgaatgagactggatttcagctgaaggca
gactccaggttaaaagcgcttaatgcaacgttcagagtgagaaacccagacaagagattt
acggagctgaggcactacagtgatgagctgcagtctgtcatctcgcatctccttcgagtc
agagctagagtagcagatcgactctatggtgtatataaagtacatgggaattatgggaga
gtttttagtgaatggagtgccatcgaaaaagaaatgggggatgggctgcagagtgctggg
catcacatggacgtgtatgcatcttctattgatgatattttggaagacgaagagcactat
gcagatcagctgaaggagtatctgttttatgcagaagctcttcgggctgtgtgcaggaag
catgagcttatgcagtatgacctggagacagctgctcaagacctggctgccaagaagcag
cagtgcgaggagctggccactgggactgtgagaacattctcgttgaagggaatgactacc
aaactctttggtcaagaaactccagagcaaagagaagccaggataaaggtgctagaggag
cagataaatgaaggggaacagcagctgaagtctaaaaatctggaaggcagagaatttgtg
aaaaatgcatgggctgatattgaacgcttcaaagaacaaaagaaccgggacctaaaggaa
gccctcatcagctatgctgtcatgcagatcagcatgtgcaaaaagggaattcaggtttgg
accaatgctaaagaatgcttcagcaagatgtaa
DBGET
integrated database retrieval system