Mus caroli (Ryukyu mouse): 110311503
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Entry
110311503 CDS
T05910
Symbol
Ift57
Name
(RefSeq) intraflagellar transport protein 57 homolog
KO
K04638
intraflagellar transport protein 57
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal05016
Huntington disease
mcal05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
110311503 (Ift57)
05022 Pathways of neurodegeneration - multiple diseases
110311503 (Ift57)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcal03037
]
110311503 (Ift57)
Cilium and associated proteins [BR:
mcal03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
110311503 (Ift57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT57
Mod_r
MCPsignal
DUF745
Motif
Other DBs
NCBI-GeneID:
110311503
NCBI-ProteinID:
XP_021040502
Ensembl:
MGP_CAROLIEiJ_G0020800
UniProt:
A0A6P5R9B5
LinkDB
All DBs
Position
16:46528531..46587853
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AA seq
429 aa
AA seq
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MAAAAAVIPPSGLDDGVSRARGEGAGEAVVERGPGAAYHMFVVMEDLVEKLKLLRYEEEL
LRKSNLKPPSRHYFALPTNPGEQFYMFCTLAAWLINKTGRAFEQPQEYDDPNATISNILS
ELRSFGRTADFPPSKLKSGYGEQVCYVLDCLAEEALKYIGFTWKRPSYPVEELEEETVPE
DDAELTLSKVDEEFVEEETDNEENFIDLNVLKAQTYRLDTNESAKQEDILESTTDAAEWS
LEVERVLPQLKVTIRTDNKDWRIHVDQMHQHKSGIESALKETKGFLDKLHNEISRTLEKI
GSREKYINNQLEHLVQEYRGAQAQLSEARERYQQGNGGVTERTRLLSEVTEELEKVKQEM
EEKGSSMTDGTPLVKIKQSLTKLKQETVQMDIRIGVVEHTLLQSKLKEKCNMTRDMHAAV
TPESAIGFY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcggccgcggtgatcccgccgtcgggcttggacgatggggtgtctcgggct
cgcggggaaggcgcaggggaggctgtggtggagcgcgggccgggagcggcctaccacatg
ttcgtggtgatggaagacttagtggagaagctgaagctgctccgctacgaggaggagcta
ctccgaaagagcaatctgaagcccccgtccagacactactttgctctgcctaccaaccca
ggcgagcagttctacatgttttgcactcttgctgcgtggctgatcaacaaaactggccgt
gcctttgagcagcctcaagaatacgacgatcccaatgcaactatatctaatatactctct
gagcttcgctcttttgggaggactgcagattttcctccttcaaaattaaagtctggttac
ggagaacaagtatgctatgttcttgattgcttagctgaagaagctttaaaatatattggt
ttcacttggaaaaggccatcatacccagtggaagaactagaagaagaaactgttccagaa
gatgatgccgagttaacattaagtaaagtggatgaagaatttgtggaagaggagacagat
aatgaagaaaactttattgatctcaacgttttaaaggcccagacctatcgcttggacaca
aacgagtctgccaaacaagaagatattttggaatctacgacagatgccgcggaatggagc
ctagaagttgagcgtgtactaccgcagctgaaagtcacgattaggactgacaataaggat
tggaggatccatgttgaccaaatgcaccagcacaaaagtgggattgaatctgctctgaag
gagaccaaggggtttttggacaagctccataatgaaattagcaggactctggaaaagatt
ggcagccgagaaaagtacattaacaatcaacttgagcacttggttcaagaatatcgcggg
gcccaagcccagctaagtgaggcaagggagcgctaccagcagggcaatggcggagtaact
gaacggaccagactcctctctgaggttacagaagaattagaaaaggtaaagcaagaaatg
gaagagaagggcagcagcatgacggacggcactcctttggtgaagattaagcagagctta
accaagctgaagcaagaaactgttcagatggacattagaatcggtgtggtggagcacacg
ttacttcagtcaaaactcaaggagaagtgtaacatgaccagggacatgcatgcagctgtc
accccagagtcagcaattggcttctattaa
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