Mus caroli (Ryukyu mouse): 110311558
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Entry
110311558 CDS
T05910
Symbol
Runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04530
Tight junction
mcal04659
Th17 cell differentiation
mcal05200
Pathways in cancer
mcal05202
Transcriptional misregulation in cancer
mcal05220
Chronic myeloid leukemia
mcal05221
Acute myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110311558 (Runx1)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
110311558 (Runx1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110311558 (Runx1)
05202 Transcriptional misregulation in cancer
110311558 (Runx1)
09162 Cancer: specific types
05221 Acute myeloid leukemia
110311558 (Runx1)
05220 Chronic myeloid leukemia
110311558 (Runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110311558 (Runx1)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
110311558 (Runx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
110311558
NCBI-ProteinID:
XP_021040595
Ensembl:
MGP_CAROLIEiJ_G0020978
UniProt:
A0A6P5RCN6
LinkDB
All DBs
Position
16:complement(86995548..87219244)
Genome browser
AA seq
465 aa
AA seq
DB search
MASDSIFESFPSYPQCFMRDASTSRRFTPPSTALSPGKMSEALPLGAPDGGAALASKLRS
GDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVM
AGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAI
KITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASL
NHSTAFNPQPQSQMQDARQIQPSPPWSYDQSYQYLGSITSSSVHPATPISPGRASGMTSL
SAELSSRLSTAPDLTAFGDPRQFPTLPSISDPRMHYPGAFTYSPPVTSGIGIGMSAMSSA
SRYHTYLPPPYPGSSQAQAGPFQTGSPSYHLYYGASAGSYQFSMVGGERSPPRILPPCTN
ASTGAALLNPSLPSQSDVVETEGSHSNSPTNMPPARLEEAVWRPY
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagacagcatttttgagtcatttccttcatatccacagtgcttcatgagagat
gccagcacgagccgccgcttcacgccgccttccaccgcgctgagccccggcaagatgagc
gaggcgctgccgctgggcgccccggatggcggcgccgccctggccagcaagctgaggagc
ggcgaccgcagcatggtggaggtactagctgaccaccccggcgagctagtgcgcaccgac
agccccaacttcctctgctccgtgctgcccactcactggcgctgcaacaagaccctgccc
atcgctttcaaggtggtggcactgggggacgtcccggatggcactctggtcactgtcatg
gcaggcaacgatgaaaactactcggcagagctgagaaatgctaccgcggccatgaagaac
caggtggcgagattcaacgacctcaggtttgtcgggcggagtggtagaggcaagagcttc
actctgaccatcaccgtctttacaaacccgccacaagttgccacctaccatagagccatc
aaaatcacagtggacggcccccgagaaccccgaagacatcggcagaaactagatgatcag
accaagcccgggagtttgtccttttccgagcggctcagtgaattggagcagctgcggcgc
acggccatgagggtcagcccgcaccacccagcccccacgcccaaccctcgggcctccttg
aaccactccactgcctttaaccctcagcctcaaagtcagatgcaggatgccaggcagatc
cagccgtccccaccgtggtcctatgaccagtcctaccagtacctgggatccatcacctct
tcctctgtccacccagcgacacccatttcacccggccgtgccagcggcatgaccagcctc
tccgcagaactttccagtcgactctcaaccgctccggatctgaccgccttcggcgaccca
cgccagtttcctacgctgccgtccatctccgacccgcgcatgcactacccaggcgccttc
acctactcgccgcccgtcacgtcgggcatcggcatcggcatgtcagccatgagctcggcc
tctcgctaccacacctacctgccgccgccctaccccggctcctcgcaggcgcaggccggg
cccttccagacaggctcgccctcctaccatctatactacggcgcctcggccggctcctac
cagttctccatggtgggcggcgagcgatcgcccccgcgcatcctgccgccctgcaccaac
gcatccaccggcgccgcgctgctcaaccccagcctccccagccagagcgacgtggtggag
accgagggcagccatagcaactcgcccaccaacatgccccccgcgcgcctggaggaggcc
gtgtggcggccctactga
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