Mus caroli (Ryukyu mouse): 110311617
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Entry
110311617 CDS
T05910
Symbol
Ufd1
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110311617 (Ufd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcal03009
]
110311617 (Ufd1)
Ribosome biogenesis [BR:
mcal03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
110311617 (Ufd1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
110311617
NCBI-ProteinID:
XP_021040687
Ensembl:
MGP_CAROLIEiJ_G0020554
UniProt:
A0A6P5R0G9
LinkDB
All DBs
Position
16:15303515..15326371
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AA seq
307 aa
AA seq
DB search
MFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAV
SIIECDMNVDFDAPLGYKEPERPVQHEESIEGEADHSGYAGEVGFRAFSGSGNRLDGKKK
GVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRPLVKKVEEDEAGGRFVAFSGEGQSL
RKKGRKP
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgttttctttcaacatgtttgaccacccgattccccgggtcttccagaaccgcttctcc
acgcagtaccgctgcttctccgtgtccatgctagcagggcctaatgacaggtcagatgtg
gagaaaggagggaagataattatgccaccctcagccctcgatcaactcagccggctcaac
attacctatcctatgctgtttaaattgaccaataagaattcagatcggatgacacactgc
ggtgtactggagtttgttgctgatgaaggcatctgttacctcccccactggatgatgcag
aatttgctgttggaggaagggggcctggttcaggtggaaagtgtcaacctccaagtggcg
acctactctaagttccagcctcagagcccagacttcctggacatcaccaaccctaaagcg
gtattagaaaatgcattgagaaacttcgcctgtctgacgactggagatgtgattgctatc
aactacaatgagaagatctatgagctgcgggtgatggagaccaaacctgacaaggctgta
tccattattgaatgtgacatgaatgtggattttgatgctcccttgggatacaaagaacca
gaaagaccagtgcagcatgaggagtcaatagagggagaagcagaccacagtggctatgcc
ggagaggtgggcttccgtgccttctctggttctgggaatagactagatggaaagaaaaaa
ggggttgagcccagtccctccccaatcaagcctggagacatcaagagaggaattcctaat
tacgaatttaagcttggtaagataactttcatcagaaattcacgtccattggtcaaaaag
gttgaagaggatgaagctggaggcagattcgttgctttctctggagaaggacagtcactg
cgtaagaagggaagaaagccctaa
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